| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024245
Identifier: 238024245
GI number: 238024245
Start: 1005714
End: 1005986
Strand: Direct
Name: 238024245
Synonym: bglu_2g08270
Alternate gene names: NA
Gene position: 1005714-1005986 (Clockwise)
Preceding gene: 238024244
Following gene: 238024246
Centisome position: 35.57
GC content: 65.2
Gene sequence:
>273_bases ATGACTGAACAGTCGCACCAGTCCGACCCGCACCGCCGCGCGCGCCTTCGCTGGCGCGCGCGGCGCGGTCTGCTGGAGAA CGACCTGATTTTCGAGCGTTTCTTCAGCCGATACGAGCATGACCTCACCGATGCCGACGTGGGCGCGCTGACCCGCCTGC TCGAACTATCCGACAACGACCTGATGGACTTGCTGCTTGCCCGCAAAGAACCGGAGGGCGACCTTGCCGGCCCGGACGTT TCCCGGCTGCTGGAGATGCTGCGCAGTGCATGA
Upstream 100 bases:
>100_bases TGAACTGCGTCGACGTTTGCCCGAAGGGGCTGAACCCGACCAAGGCGATCGGCAAGATCAAGGAATTGATGGTTCGCCGC GCGGTCTGAGCTGATTCGAC
Downstream 100 bases:
>100_bases GAGCGCTGCGTCCGTTATCGAATTCCGTTTTCATTTTCGATTGAGGATGTGCCATGACTCCGTCTGATGTTAAAGCCACG CTATCGTTCAGCGACAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTEQSHQSDPHRRARLRWRARRGLLENDLIFERFFSRYEHDLTDADVGALTRLLELSDNDLMDLLLARKEPEGDLAGPDV SRLLEMLRSA
Sequences:
>Translated_90_residues MTEQSHQSDPHRRARLRWRARRGLLENDLIFERFFSRYEHDLTDADVGALTRLLELSDNDLMDLLLARKEPEGDLAGPDV SRLLEMLRSA >Mature_89_residues TEQSHQSDPHRRARLRWRARRGLLENDLIFERFFSRYEHDLTDADVGALTRLLELSDNDLMDLLLARKEPEGDLAGPDVS RLLEMLRSA
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0350 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005631 [H]
Pfam domain/function: PF03937 DUF339 [H]
EC number: NA
Molecular weight: Translated: 10519; Mature: 10388
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQSHQSDPHRRARLRWRARRGLLENDLIFERFFSRYEHDLTDADVGALTRLLELSDND CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH LMDLLLARKEPEGDLAGPDVSRLLEMLRSA HHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TEQSHQSDPHRRARLRWRARRGLLENDLIFERFFSRYEHDLTDADVGALTRLLELSDND CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH LMDLLLARKEPEGDLAGPDVSRLLEMLRSA HHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]