Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024227

Identifier: 238024227

GI number: 238024227

Start: 984225

End: 985811

Strand: Reverse

Name: 238024227

Synonym: bglu_2g08080

Alternate gene names: NA

Gene position: 985811-984225 (Counterclockwise)

Preceding gene: 238024228

Following gene: 238024220

Centisome position: 34.87

GC content: 62.82

Gene sequence:

>1587_bases
ATGGACGAACATGACTTCTCGCAATTGCCGTCGGCCGCTCAGGCCTATATCCGAGAACTGGAGGCGCGCAACCGACAACT
AGGCGAACGCATCGCCCAGTTGGAGGAGCAGTTCCGCTTGGCGCAGAGCAAACGCTTCGCACCGAGCAGCGAGAAGCTGA
AGGACCGCGTATTCGACGAGGCCGAGCAGATGGCTGCGGCAGCGCCATCGGAGGACCCCGACGACGACGCGTTCGCGTTG
CCGGACACAGGGCTGCCCGCACCCGATGAGCCAGAGCGGGGCAAGCGAGGCCGCAAACCGTTGCCGGCCGAGCTGCCGCG
CCAGCGCATTGAATACGATCTACCCGACGATGAGAAGGTCTGCCCCTGCTGCCGCAGCGCGATGCATCGCATGGGCGAAG
AAGTCAGCGAGCAACTGCACTTCGAAGTGAAAGCCTCTGTGCTGCAGCACGTTCGCTTCAAGTACGCATGTCGCCACTGC
GAGCGCAATGCCGAGAGCACGCCGATCGTGACCGCCCCGATGCCGGCGCAGCCGCTGCCGGGCAGCAATGCGAGCGCAGC
GCTCATCGCCACCGTGACGGCGGGCAAATATGTCGATGGCACGCCGCTATACCGCATGGAGGATGCGCTCTCGCGCGCGA
ACATCGCGGTGGGCCGCGGCACGCTGGCCAACTGGATCATCCGGCCCGCTCAACTGCACTACAGCCGACTGTACGAGGCC
TTGCGCCAAACGCTGCTATCGCAACAGTTGATTCACGGCGACGAGACGACGGTGCAGGTTCTCAAAGAACCGGGCAAGAC
CGCGCAAAGCACCTCGTATATGTGGGTCTATCGCAGTGCCGAGCAATGCGAGCAGCCGGTGGTGCTGTTCGACTACCAGC
CAGGGCGCGGCCAAGAGTATCCGCAAGCGTTCCTGGCCGGATACACGGGCATGCTGATGAGTGACGGCTACGCTGCGTGG
CGCACGCTCGACGCAGCGACGCACTTGGGCTGCCTTGCCCACGCCCGTAGGGCGTTCGTCGATGCGCTCAAAGGTCAGAA
GAAGCCCGGTGGGCGTGCGGCACAGGCTCTTGAGTACTTCAAGGCGTTGTATCAGGTCGAGACGCTCGCCAAGGGCGGTC
TGCCCGAAGGAGAAACCCGCGACGATTACACGTACCGATTACGCCAGGAACATAGCGTGCCGTTGCTCACTGCATTCAAG
ACCTGGCTGGACGAGCAGGCGCCACACGTGTTGCCCGAAAGTCTGCTGGGCAAGGCGATCAGCTATACGCGCAATCAATG
GGAGTATCTGAGCCGCTACGTCATCGACGGCCGCGCCCCAATCGACAATAACGTTATCGAACGCGACATCAGGCCCTTCT
GCACAGGCCGCAAATCTTGGCTGTTCAGCGACACGGTCGCTGGCGCGAAGGCGAGCGCAATGGTCTACAGTCTCATGCTC
ACGTGCCGCGCATGCAACGTCGAGCCGTATGCCTACCTGCTTCATGTGCTCACCGAACTGCCTCAGCGAGCCCCGGATGC
CGACATCACGGACTTGCTGCCGTTCAACTTCGCGAAACGGCAAACGGCTACACCGCCGCCGCCTTGA

Upstream 100 bases:

>100_bases
AAGGCGGCGCCAACTGATGTTGTCGGTAAACAACGCGCGCGACGGTTGTTGCCCATTTCCGTAAACCCACTGGGCGCGCC
GCTCCGGTATGGTGAGCGGC

Downstream 100 bases:

>100_bases
TCGATCGAGCGCATAGCTTCGGCCCGACCGTCAACGTGTGGCGAATTGAGCGCTTACGATCCTCTTCCTGCGGGTTGTAG
TAGAACAGCGCCGCACTCGG

Product: transposase IS66

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDDAFAL
PDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHC
ERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA
LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDGYAAW
RTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFK
TWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML
TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP

Sequences:

>Translated_528_residues
MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDDAFAL
PDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHC
ERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA
LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDGYAAW
RTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFK
TWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML
TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
>Mature_528_residues
MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDEAEQMAAAAPSEDPDDDAFAL
PDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKVCPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHC
ERNAESTPIVTAPMPAQPLPGSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA
LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEYPQAFLAGYTGMLMSDGYAAW
RTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYFKALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFK
TWLDEQAPHVLPESLLGKAISYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML
TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 59222; Mature: 59222

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AEQMAAAAPSEDPDDDAFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKV
HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
CPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHCERNAESTPIVTAPMPAQPLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
GSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA
CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEY
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCEEEEECCCCCCCHH
PQAFLAGYTGMLMSDGYAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFKTWLDEQAPHVLPESLLGKAI
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
SYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCEEEHHHHCCCHHHHHHHHHHH
TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MDEHDFSQLPSAAQAYIRELEARNRQLGERIAQLEEQFRLAQSKRFAPSSEKLKDRVFDE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AEQMAAAAPSEDPDDDAFALPDTGLPAPDEPERGKRGRKPLPAELPRQRIEYDLPDDEKV
HHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
CPCCRSAMHRMGEEVSEQLHFEVKASVLQHVRFKYACRHCERNAESTPIVTAPMPAQPLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
GSNASAALIATVTAGKYVDGTPLYRMEDALSRANIAVGRGTLANWIIRPAQLHYSRLYEA
CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LRQTLLSQQLIHGDETTVQVLKEPGKTAQSTSYMWVYRSAEQCEQPVVLFDYQPGRGQEY
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHCCCEEEEECCCCCCCHH
PQAFLAGYTGMLMSDGYAAWRTLDAATHLGCLAHARRAFVDALKGQKKPGGRAAQALEYF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KALYQVETLAKGGLPEGETRDDYTYRLRQEHSVPLLTAFKTWLDEQAPHVLPESLLGKAI
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
SYTRNQWEYLSRYVIDGRAPIDNNVIERDIRPFCTGRKSWLFSDTVAGAKASAMVYSLML
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCEEEHHHHCCCHHHHHHHHHHH
TCRACNVEPYAYLLHVLTELPQRAPDADITDLLPFNFAKRQTATPPPP
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]