Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is mmgD [H]

Identifier: 238024218

GI number: 238024218

Start: 960751

End: 961926

Strand: Direct

Name: mmgD [H]

Synonym: bglu_2g07980

Alternate gene names: 238024218

Gene position: 960751-961926 (Clockwise)

Preceding gene: 238024217

Following gene: 238024219

Centisome position: 33.98

GC content: 72.28

Gene sequence:

>1176_bases
ATGCCGACCGACCACGATCTGCCGTCCCCGGACGCCGTCCGAGCGCGCGCCGTCCGCGACCAAGGCGAGATCGATGCGGT
TTCGATTTCGCCGGACCGGCTTGCCGTGCGCGGGATCGATCTGCTGCAACTGATCGATTCCGTCGACTTCGCTGCCGCGA
TCCTGCACGTGCTCACGGGCCGGATGCCGGACGCCGACGACGCGCGCGCCCTGGATGGCGCGCTGGCGTCGACGCTCGCC
GACGACGGGCCGGCCGAGGACGGCCTGCTCGCCGCGCAACTGGCCCGCCGCCAGCCTCGGCCCGAGGCCTTCCTGGTCGC
CGCGATCTCGGCCGGACTGGCTGGGCCGTCGCCACGGCCTCGCGCGTGGCCCGTCACGCTGTCCTACGGCGGGCAGGGCG
ACGAGCTTGCCACCGGCCTCGCCATCATTGCCGCGTTACCTCGGCTGCTGGCGGTGTGGTGCGACGCGAACGGCCAGGTG
CCGGTCGCGCGGCGAGCGCGGTCGGCGCACGCCGCGCGCGGCTTCAGCGCGGCGATGCTGGGCTGCCTGGGCGGCGACGC
AGCGCACGACGCACCGGCGCGCCTGTTCGACGTCCTGCTGGTGGCGCTGCATGGCGGCTTTGGCCTCGTCGCGCCGACCA
TCGCGCTGCCGCGCTTCTCGGCGAGCACCTATGCAACCGTCGACCTTAACCTGGTCGCCGGCCTGACCGGCAGCGGGCCA
GCGCACGTCGGCGCCTGCAGCGACGCGACTCGCTTTTTTGCAAGCCTGGTCGGCAAATCGGCTGCCGAGATTCGCGATCG
CGTCGCGCAGCGCCTGCAGGCGGGCGACCGGATTCCCGGTTTCGGCCATCCGTTGCTCGAGCGCGATCCGCGGCCGGCGG
CGCTCGAGCGCCACGCCGTGAGGCTCGGTGTTGGCGGCGCAGCGTTCGACGCTTATCGGGCGGTATGCAATGCGATGCAC
GACATGCGGGGGCTGCCCCCGAACATCGATTCGGTTGCCGCGGCGATCCTGCTGGAGCTTGGCGTGCCCGACGCGTTGGC
CACGCCGGTGTTTTTGCTCGCGCGGATGCCGACCATGCTCGCGCATGCGTTGCAGAAGAAGGCCCACCCGCCGTTCGGCC
AGGCCCGCCCCGTGGCGCGCGAACGCCTTGCTGCACTGCCGAAGGCGTGGATCTGA

Upstream 100 bases:

>100_bases
TCGGCGAGCATGCCGGCGTGTCGAAGGGGAGCGGGATGCTCGCGATCGGCTTCGAGGTGCTGATCGCGAAACCGATGCAG
CAGTGAGCGGGGCCGCGCCG

Downstream 100 bases:

>100_bases
CGCCGCGCCGCCGGCGCACCCCTCAACCCGACATGGAACCGACACCGACATGCTGACCAACCTGCCGCTGGCGCCGCATT
GTGCCGCCTCCGATACCCAG

Product: Citrate synthase

Products: NA

Alternate protein names: Citrate synthase 3; Citrate synthase III; Methylcitrate synthase [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTGRMPDADDARALDGALASTLA
DDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRPRAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQV
PVARRARSAHAARGFSAAMLGCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP
AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAVRLGVGGAAFDAYRAVCNAMH
DMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTMLAHALQKKAHPPFGQARPVARERLAALPKAWI

Sequences:

>Translated_391_residues
MPTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTGRMPDADDARALDGALASTLA
DDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRPRAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQV
PVARRARSAHAARGFSAAMLGCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP
AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAVRLGVGGAAFDAYRAVCNAMH
DMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTMLAHALQKKAHPPFGQARPVARERLAALPKAWI
>Mature_390_residues
PTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTGRMPDADDARALDGALASTLAD
DGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRPRAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQVP
VARRARSAHAARGFSAAMLGCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGPA
HVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAVRLGVGGAAFDAYRAVCNAMHD
MRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTMLAHALQKKAHPPFGQARPVARERLAALPKAWI

Specific function: Catalyzes the synthesis of citrate from acetyl-CoA and oxaloacetate. The genomic context suggests that this protein probably functions as a 2-methylcitrate synthase, i.e. catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate [H]

COG id: COG0372

COG function: function code C; Citrate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the citrate synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016142
- InterPro:   IPR016143
- InterPro:   IPR002020
- InterPro:   IPR016141
- InterPro:   IPR019810 [H]

Pfam domain/function: PF00285 Citrate_synt [H]

EC number: =2.3.3.5; =2.3.3.1 [H]

Molecular weight: Translated: 40671; Mature: 40540

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTG
CCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RMPDADDARALDGALASTLADDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRP
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
RAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQVPVARRARSAHAARGFSAAML
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
GCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCC
AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAV
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHH
RLGVGGAAFDAYRAVCNAMHDMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTML
HCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AHALQKKAHPPFGQARPVARERLAALPKAWI
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PTDHDLPSPDAVRARAVRDQGEIDAVSISPDRLAVRGIDLLQLIDSVDFAAAILHVLTG
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RMPDADDARALDGALASTLADDGPAEDGLLAAQLARRQPRPEAFLVAAISAGLAGPSPRP
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
RAWPVTLSYGGQGDELATGLAIIAALPRLLAVWCDANGQVPVARRARSAHAARGFSAAML
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
GCLGGDAAHDAPARLFDVLLVALHGGFGLVAPTIALPRFSASTYATVDLNLVAGLTGSGP
HHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCC
AHVGACSDATRFFASLVGKSAAEIRDRVAQRLQAGDRIPGFGHPLLERDPRPAALERHAV
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHH
RLGVGGAAFDAYRAVCNAMHDMRGLPPNIDSVAAAILLELGVPDALATPVFLLARMPTML
HCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AHALQKKAHPPFGQARPVARERLAALPKAWI
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]