Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024216

Identifier: 238024216

GI number: 238024216

Start: 958593

End: 960020

Strand: Direct

Name: 238024216

Synonym: bglu_2g07960

Alternate gene names: NA

Gene position: 958593-960020 (Clockwise)

Preceding gene: 238024215

Following gene: 238024217

Centisome position: 33.9

GC content: 66.32

Gene sequence:

>1428_bases
ATGTCTGACGATCGCGCCACGGCCGCGCCGGGCGCGCCGGCTTCGACACCTGCGTCGCGGGCCGACCGGATGCGACAGTT
CGCGGCCGAGGTGCGCGCGACATGGGTGATGCTCTATCCGATGGTGCTGTCGTCGATTTTCGGCTACTGCATGACGCTGT
TCGATTATCGCTGGATTCGCGATCTGCCGGCGGAGGACATGGCGCTGCTGGCGCTCGTCAACGGCAGCGTGGCGATCTTC
CTGTTCCTGCTCGGCAAGAGCTTCGAGGAGTCGTTCGTGGCGATATTCGCCAAGGCGCCGCGCGAGGAGCAGGGCCGGCT
GTTCGTGCAGAGCCTGATATTCGCGGGCGGGACCGGCGTGCTGGTGGTGCTGGTGCTGATCGGTACGCGGGCACCCTTGA
TGACGTTCATTTCCGGCGGCCAGTTCCATGGCGAGCGCATGTTCGGCTACTACGCGCTGGTGATAGGCAGCTTTCCGCTC
ACGCTGCTCAGCACGGCGCTTTCCGCCGCGATGCGCACCTACGGCGACACCAAGTCACCCGCGCGCATCAGCATTACATG
CGGCGTGGTCAACAACGTCCTCGATCCGCTGCTCGTGTTCGGGCTGTTCGGCCAGCATCCGTCGCTGCAGTTGTTCGGCC
TCGCGCTGACCTCGTGGATCACCAAGAGCCTGTATCTGGGCTGGTGCGTCCGGTGCATCCGTCCGCGGCTGCGCCGCGAG
CAGGTCGTGCTGCCGCGTCCCGGCGTGGAGTGGCCGACACAAGGACGGCTGCTGCGCATCTTCCTGCCTTCGGCTGCGCT
CGAGGCGCTGACCTTTCTTGCGAATACGGCGGTCTACTCGCTGATCGCCCGCTACGGCGTGCGCGCCATCGGCGGGTACG
GAATCGGCTTCGAGCTGATGACGATCGGATTCATCCTCATCAAAGGTTTGAGCATGGTGTTCATGATCCGGATCGGTCAC
CTCGTGCGCAGCCGGGCACCGTCCCGTGCCGCACTGCAGTCGGTGATGCTGCTCGGCGTGCTGTTCACCGCGGCGATCAG
TGCCGTGTTCTTCCTGCTGCGTTCGCTCGCGCTGCACTTTCTCGCGTCCGACGCCGGCGTGATCGCGGTCGCGACTGCGC
TGCTCGACTACGTCCCGCTCTTCGTCTTCAGCTATCTGCTGACGAACCTCGTGACAGGCTGCTTCCAGGTTCTCGAGCGC
CCGGCGCCCGCGATGGCGCTCGGGCTGTTCTTTTCCTGGGTCGTCACGCCGGGCGCGATCTACCTGGGCGTCATGCACCA
TCTCGCGCTCACGCAATTGTTCGCGCTGCTCGCGGGCGTGAGCGTGGTGCGCCAGGCCGTGTACCTGAGACTGTTCCTGC
GGCTCATGCGCAGGCTTGGCAACGCGCCGGCCGCGCGCCCGGCCGGCGCGCCCGCCGCCGCCGGATGA

Upstream 100 bases:

>100_bases
GTCGACAAGGGTGAGGGGCGTCTCATGGTGCTCGGCCGCGATGCATTGCGCTTTTCGGCGCGCCAGAAGCTGCCGCGCCT
GATCGACGAGAGGCACGCCC

Downstream 100 bases:

>100_bases
TTCCACGACCGTTGTACCCCTAGCCCTCACGACTGGAGACCTGCATGCGTACCAATACCCCCGCCGAAGTCAGCGCCGAC
ACCTATGACTACTACGTCGA

Product: putative Na+-driven multidrug efflux pump

Products: NA

Alternate protein names: Na+-Driven Multidrug Efflux Pump; Sodium-Driven Multidrug Efflux Pump Protein

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MSDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIRDLPAEDMALLALVNGSVAIF
LFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGVLVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPL
TLLSTALSAAMRTYGDTKSPARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE
QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELMTIGFILIKGLSMVFMIRIGH
LVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHFLASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLER
PAPAMALGLFFSWVVTPGAIYLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG

Sequences:

>Translated_475_residues
MSDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIRDLPAEDMALLALVNGSVAIF
LFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGVLVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPL
TLLSTALSAAMRTYGDTKSPARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE
QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELMTIGFILIKGLSMVFMIRIGH
LVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHFLASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLER
PAPAMALGLFFSWVVTPGAIYLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG
>Mature_474_residues
SDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIRDLPAEDMALLALVNGSVAIFL
FLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGVLVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPLT
LLSTALSAAMRTYGDTKSPARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRREQ
VVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELMTIGFILIKGLSMVFMIRIGHL
VRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHFLASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLERP
APAMALGLFFSWVVTPGAIYLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51603; Mature: 51472

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLPAEDMALLALVNGSVAIFLFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGV
CCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
LVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPLTLLSTALSAAMRTYGDTKSP
HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
ARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE
CEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELM
CEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TIGFILIKGLSMVFMIRIGHLVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLERPAPAMALGLFFSWVVTPGAI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDDRATAAPGAPASTPASRADRMRQFAAEVRATWVMLYPMVLSSIFGYCMTLFDYRWIR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLPAEDMALLALVNGSVAIFLFLLGKSFEESFVAIFAKAPREEQGRLFVQSLIFAGGTGV
CCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
LVVLVLIGTRAPLMTFISGGQFHGERMFGYYALVIGSFPLTLLSTALSAAMRTYGDTKSP
HHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
ARISITCGVVNNVLDPLLVFGLFGQHPSLQLFGLALTSWITKSLYLGWCVRCIRPRLRRE
CEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QVVLPRPGVEWPTQGRLLRIFLPSAALEALTFLANTAVYSLIARYGVRAIGGYGIGFELM
CEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TIGFILIKGLSMVFMIRIGHLVRSRAPSRAALQSVMLLGVLFTAAISAVFFLLRSLALHF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASDAGVIAVATALLDYVPLFVFSYLLTNLVTGCFQVLERPAPAMALGLFFSWVVTPGAI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YLGVMHHLALTQLFALLAGVSVVRQAVYLRLFLRLMRRLGNAPAARPAGAPAAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA