Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is lifO [H]

Identifier: 238024195

GI number: 238024195

Start: 937627

End: 938685

Strand: Direct

Name: lifO [H]

Synonym: bglu_2g07740

Alternate gene names: 238024195

Gene position: 937627-938685 (Clockwise)

Preceding gene: 238024194

Following gene: 238024196

Centisome position: 33.16

GC content: 76.68

Gene sequence:

>1059_bases
ATGGCGACGGGCGATCGTGCGGCGCGCGGCGGGCGATCCGCGTGGCCGAGGCGCGGTGCGTCGTTCGCGCTGGCCGCGGC
CGTCGCGGTCGCCTCGTGTGCCGCGATCGCGCTGTGGCTGCGGCCTGCCGGCCCCGCCCCCGCGCCGGCCGCGGCGGGCG
CGGCCGCCCCGGCCGGCCGGCCCGGCACGGCGAGCGGCGCGGCCGATGCCGCCGCGCCGTTGCCGGTGGCGCTGCCTGCC
ACGCTGGCCGGCTCGAATGCGCCGCGCCTGCCGCTCGGCGCCGACGGCCGGCTCGCGAGAACCCGTGCGGTGCGCGACTT
CTTCGACTATTGCCTGACCGCGCAAGGCGACCTGACGCCCGCCGCGCTCGACGTGCTGGTGCGGCGCGAGATTGCCGCGC
AGCTCGACGGCAGCCCCGCCCAGGCCGAGGCGCTCGACGTGTGGCGGCGCTATCGCGCCTATTTCGACGCGCTCGGCAAA
TTGCCCGGTGACAACGCGGTGCTCGGCGACAAGCTCGATCCGACCGCCATGCAGTTCGCGCTCGACCAGCGCGCGGCGCT
GGCCGATCGCACGCTCGGCGAGTGGGCCGGGCCCTTCTTCGGCGACGAGCAGCGCCGGCAGCGCCACGACCTCGAACGGC
TCCGGATCGCCAACGACGCCTCGCTGAGCCCCGAGCAGAAGGCTGCGCGGCTGGCCGCGCTCGATGCGCAGCTGACGCCG
GGGGAGCGCGCCCAGCAGGCGGCGCTGCAGGCGCAGCAGGACGCGGTGAAGAAGATCGCCGACTTGCAGAAGGCCGGCGC
GACGCCGGACCAGATGCGTGCGCAGATCGCGCAGACGCTCGGGCCGGAAGCGGCCGCGCGCGCCGCGCAACTGCAGCAGG
ACGACGATGCCTGGCAGAGCCGCTATCGCGCCTACGCGGCCGAGCGCGACCGGATCGCCGCGCAGGGGCTCGCGCCGCAG
GATCGCGACGCGCGGATTGCGCAGCTCAGGCAGCAGACCTTCAAGGCGCCGGGCGAGGCGATCCGCGCGGCGTCGCTCGA
TCGCGGCGCGGGCGGCTAG

Upstream 100 bases:

>100_bases
ACGAGATCAACCAGCTGCTCGGCGTGCGCGGCGCCAACGCGGAAGACCCGCTTGCGGTGATCCGCACCCATGTGAACCGG
CTCAAGCTGCAGGGCGTGTG

Downstream 100 bases:

>100_bases
GGGCCACGCCGCGCCGGAGGCCCGTTCGCGGCGCTCGAACGGGGTGGGGCGGCGGCGGTGCCGCTGCAGCGCCGGTGGTG
TGCCGAGATGGCGCCTGTGA

Product: lipase chaperone

Products: NA

Alternate protein names: Lipase activator protein; Lipase foldase; Lipase helper protein; Lipase modulator [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGRPGTASGAADAAAPLPVALPA
TLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTPAALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGK
LPGDNAVLGDKLDPTAMQFALDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP
GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQSRYRAYAAERDRIAAQGLAPQ
DRDARIAQLRQQTFKAPGEAIRAASLDRGAGG

Sequences:

>Translated_352_residues
MATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGRPGTASGAADAAAPLPVALPA
TLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTPAALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGK
LPGDNAVLGDKLDPTAMQFALDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP
GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQSRYRAYAAERDRIAAQGLAPQ
DRDARIAQLRQQTFKAPGEAIRAASLDRGAGG
>Mature_351_residues
ATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGRPGTASGAADAAAPLPVALPAT
LAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTPAALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGKL
PGDNAVLGDKLDPTAMQFALDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTPG
ERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQSRYRAYAAERDRIAAQGLAPQD
RDARIAQLRQQTFKAPGEAIRAASLDRGAGG

Specific function: May be involved in the folding of the extracellular lipase during its passage through the periplasm [H]

COG id: COG5380

COG function: function code O; Lipase chaperone

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase chaperone family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004961 [H]

Pfam domain/function: PF03280 Lipase_chap [H]

EC number: NA

Molecular weight: Translated: 36857; Mature: 36725

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGR
CCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PGTASGAADAAAPLPVALPATLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTP
CCCCCCCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH
AALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGKLPGDNAVLGDKLDPTAMQFA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH
LDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHH
RYRAYAAERDRIAAQGLAPQDRDARIAQLRQQTFKAPGEAIRAASLDRGAGG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATGDRAARGGRSAWPRRGASFALAAAVAVASCAAIALWLRPAGPAPAPAAAGAAAPAGR
CCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PGTASGAADAAAPLPVALPATLAGSNAPRLPLGADGRLARTRAVRDFFDYCLTAQGDLTP
CCCCCCCCCCCCCCCEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH
AALDVLVRREIAAQLDGSPAQAEALDVWRRYRAYFDALGKLPGDNAVLGDKLDPTAMQFA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH
LDQRAALADRTLGEWAGPFFGDEQRRQRHDLERLRIANDASLSPEQKAARLAALDAQLTP
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
GERAQQAALQAQQDAVKKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQLQQDDDAWQS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHH
RYRAYAAERDRIAAQGLAPQDRDARIAQLRQQTFKAPGEAIRAASLDRGAGG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412704; 8412705 [H]