| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yxlA [H]
Identifier: 238024186
GI number: 238024186
Start: 927827
End: 929428
Strand: Direct
Name: yxlA [H]
Synonym: bglu_2g07650
Alternate gene names: 238024186
Gene position: 927827-929428 (Clockwise)
Preceding gene: 238024185
Following gene: 238024187
Centisome position: 32.82
GC content: 69.6
Gene sequence:
>1602_bases ATGAGCGATATCCCTGCCGAGCACGCCGGCATGACCAGCGTCGAGGCCTTCAGTTTCGAACGCATTCCCGACGCCGCGCG CGATGCGCGGCCGATCGACCTGTTCCGGCTGCTGTTCGGCGGCTGCAATACCTTCTCCACCTCGGTGCTCGGCAGTTTTC CGGTGCTGGTCGGCCTGTCGTTTCGAGCGGGCGTCCTGTCGATCCTGCTCGGCGTGATCGGCGGCACCTGCATACTCGCG CCGATGAGCCTGTTCGGCACCTGCAACGGCACCAACGATCCGGTGTCCTCGGGCGCGCACTTCGGCATTCACGGCCGCAT CGTCGGCTCGTTCCTCGCGCTGCTCACCTCGGTCGCGTTCTTCTCGCTCGCGGTGTGGAGTTCCGGCGACGCGCTCGTGG GCGGCGCGCACAGCCTGGTCGGGCTGCCCGTGAACGGCGCCACGGTGGGCGCGTCGTACCTGGTGTTCGCGGTGCTGGTG CTGATCGTCTGCATCTACGGCTTTCGCTTCATGCTGTGGGTGAACCGGATCGCGGTATGGACCGCGAGCCTGATGTTCGC CGCAGGCGCCGTGGCGTTCGCCGGCAGCTTCGACGCCCACTACGCCGGCACGCTCAGCACCGACAGCCCGGGCTTCTGGG CCGCGTTCTGCGGCGCGGCGCTGGTCGCCATGAGCAATCCGGTGTCGTTCGCCTCCACGCTCGGCGACTGGGCGCGCTAC ATCCCCGATACCACGCCGCGCTATCGCGTGATGGGCGCCGTGTTCGTCGCGCAGATCGCGACCTTCGTGCCGTTCTTCTT CGGCCTGGCCACCGCCACCATCATCGCTACCCGCGCGCCGTCGTTCATCGCCGCCAACGACTACGTCGGCGGCCTGCTGG CCGTCTCGCCGCGCTGGTTCCTGCTGCCCACCTGCGTGATCGCGATCATCGGCGGGATGTCGACGGGCACCACCGCGCTC TACGGCACCGGCCTCGACGTGTCGAGCATGGTGCCGAAGTGGCTGAACCGCGTGAGCGCGACGGTCCTGATCGGCACGCT CGCGATCGGCTTCATCTTCATCGGGCGCTTCGCGTTCAACCTGGTGGAGAGCGTCTCGACCTTCTCGACGCTGATCGGCA CGTTCAGCTGCCCGTGGATGGCCATCATGGTGATCGGCTACGTGACGCGGCGCGGCCACTATCTCGCCGACGACCTGCAG GTGTTCAATCGCGGCGGACGCGGCGGGCATTACTGGTTCACGCACGGCTGGAACCTGCGGGCGATCGGCGCGTGGCTGCC GGCGGCGCTGATCGGCCTGGCCTGCGTGAACCTGCCGGGGCAGTTCGTGGGCGTGCTCGGCAACCTGGGGGGCGGGCTCG ACCTGAGCGTGCCGGTGTCGATGGTGCTCGGCGGCGGCCTGTACCTGCTGTTCCTGCAACTGTTCCCGGAGCCGGACGCG GTGTACGGCCCGGCCGGCCGGCGCTTCGTGCGCGGCCGCCCGGGCGGCGCACCGGCGCTTAAGGCCGGCGCGCCGCTGGC GCGCGACGAATGCGATTCGGCAGGCCTGCTGTCGGTGCGGGCGGTCGGCGACCCGGCCGGGCGGCGCGGTTGTCCCGATT GA
Upstream 100 bases:
>100_bases AAATGATTGCGACGCCGGACCGGCCAGGCGAGACGCCGGCCGGCACAACACACCGGCCGGCCGCGAGCGGCCCGGACCGG CGCCCGAATGGAGCGAGACA
Downstream 100 bases:
>100_bases TCATGCCGCGATCGCGCGCGGGACAGATGGCCCGCCGCAGCCGCAGCGGCCCTGGCCCGTGTCGGGCGGCGCGCCTGAGC GGCGCGGCGTCGAGCTGGAA
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MSDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLSFRAGVLSILLGVIGGTCILA PMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAFFSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLV LIVCIYGFRFMLWVNRIAVWTASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWFLLPTCVIAIIGGMSTGTTAL YGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFNLVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQ VFNRGGRGGHYWFTHGWNLRAIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD
Sequences:
>Translated_533_residues MSDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLSFRAGVLSILLGVIGGTCILA PMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAFFSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLV LIVCIYGFRFMLWVNRIAVWTASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWFLLPTCVIAIIGGMSTGTTAL YGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFNLVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQ VFNRGGRGGHYWFTHGWNLRAIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD >Mature_532_residues SDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLSFRAGVLSILLGVIGGTCILAP MSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAFFSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLVL IVCIYGFRFMLWVNRIAVWTASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARYI PDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWFLLPTCVIAIIGGMSTGTTALY GTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFNLVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQV FNRGGRGGHYWFTHGWNLRAIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDAV YGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 55724; Mature: 55593
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLS CCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHCH FRAGVLSILLGVIGGTCILAPMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLVLIVCIYGFRFMLWVNRIAVW HHHHHCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCHH LLPTCVIAIIGGMSTGTTALYGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFN HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQVFNRGGRGGHYWFTHGWNLR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEE AIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA EHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCC VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD CCCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLS CCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHCH FRAGVLSILLGVIGGTCILAPMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLVLIVCIYGFRFMLWVNRIAVW HHHHHCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCHH LLPTCVIAIIGGMSTGTTALYGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFN HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQVFNRGGRGGHYWFTHGWNLR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEE AIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA EHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCC VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD CCCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]