Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is yxlA [H]

Identifier: 238024186

GI number: 238024186

Start: 927827

End: 929428

Strand: Direct

Name: yxlA [H]

Synonym: bglu_2g07650

Alternate gene names: 238024186

Gene position: 927827-929428 (Clockwise)

Preceding gene: 238024185

Following gene: 238024187

Centisome position: 32.82

GC content: 69.6

Gene sequence:

>1602_bases
ATGAGCGATATCCCTGCCGAGCACGCCGGCATGACCAGCGTCGAGGCCTTCAGTTTCGAACGCATTCCCGACGCCGCGCG
CGATGCGCGGCCGATCGACCTGTTCCGGCTGCTGTTCGGCGGCTGCAATACCTTCTCCACCTCGGTGCTCGGCAGTTTTC
CGGTGCTGGTCGGCCTGTCGTTTCGAGCGGGCGTCCTGTCGATCCTGCTCGGCGTGATCGGCGGCACCTGCATACTCGCG
CCGATGAGCCTGTTCGGCACCTGCAACGGCACCAACGATCCGGTGTCCTCGGGCGCGCACTTCGGCATTCACGGCCGCAT
CGTCGGCTCGTTCCTCGCGCTGCTCACCTCGGTCGCGTTCTTCTCGCTCGCGGTGTGGAGTTCCGGCGACGCGCTCGTGG
GCGGCGCGCACAGCCTGGTCGGGCTGCCCGTGAACGGCGCCACGGTGGGCGCGTCGTACCTGGTGTTCGCGGTGCTGGTG
CTGATCGTCTGCATCTACGGCTTTCGCTTCATGCTGTGGGTGAACCGGATCGCGGTATGGACCGCGAGCCTGATGTTCGC
CGCAGGCGCCGTGGCGTTCGCCGGCAGCTTCGACGCCCACTACGCCGGCACGCTCAGCACCGACAGCCCGGGCTTCTGGG
CCGCGTTCTGCGGCGCGGCGCTGGTCGCCATGAGCAATCCGGTGTCGTTCGCCTCCACGCTCGGCGACTGGGCGCGCTAC
ATCCCCGATACCACGCCGCGCTATCGCGTGATGGGCGCCGTGTTCGTCGCGCAGATCGCGACCTTCGTGCCGTTCTTCTT
CGGCCTGGCCACCGCCACCATCATCGCTACCCGCGCGCCGTCGTTCATCGCCGCCAACGACTACGTCGGCGGCCTGCTGG
CCGTCTCGCCGCGCTGGTTCCTGCTGCCCACCTGCGTGATCGCGATCATCGGCGGGATGTCGACGGGCACCACCGCGCTC
TACGGCACCGGCCTCGACGTGTCGAGCATGGTGCCGAAGTGGCTGAACCGCGTGAGCGCGACGGTCCTGATCGGCACGCT
CGCGATCGGCTTCATCTTCATCGGGCGCTTCGCGTTCAACCTGGTGGAGAGCGTCTCGACCTTCTCGACGCTGATCGGCA
CGTTCAGCTGCCCGTGGATGGCCATCATGGTGATCGGCTACGTGACGCGGCGCGGCCACTATCTCGCCGACGACCTGCAG
GTGTTCAATCGCGGCGGACGCGGCGGGCATTACTGGTTCACGCACGGCTGGAACCTGCGGGCGATCGGCGCGTGGCTGCC
GGCGGCGCTGATCGGCCTGGCCTGCGTGAACCTGCCGGGGCAGTTCGTGGGCGTGCTCGGCAACCTGGGGGGCGGGCTCG
ACCTGAGCGTGCCGGTGTCGATGGTGCTCGGCGGCGGCCTGTACCTGCTGTTCCTGCAACTGTTCCCGGAGCCGGACGCG
GTGTACGGCCCGGCCGGCCGGCGCTTCGTGCGCGGCCGCCCGGGCGGCGCACCGGCGCTTAAGGCCGGCGCGCCGCTGGC
GCGCGACGAATGCGATTCGGCAGGCCTGCTGTCGGTGCGGGCGGTCGGCGACCCGGCCGGGCGGCGCGGTTGTCCCGATT
GA

Upstream 100 bases:

>100_bases
AAATGATTGCGACGCCGGACCGGCCAGGCGAGACGCCGGCCGGCACAACACACCGGCCGGCCGCGAGCGGCCCGGACCGG
CGCCCGAATGGAGCGAGACA

Downstream 100 bases:

>100_bases
TCATGCCGCGATCGCGCGCGGGACAGATGGCCCGCCGCAGCCGCAGCGGCCCTGGCCCGTGTCGGGCGGCGCGCCTGAGC
GGCGCGGCGTCGAGCTGGAA

Product: cytosine/purines, uracil, thiamine, allantoin permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLSFRAGVLSILLGVIGGTCILA
PMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAFFSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLV
LIVCIYGFRFMLWVNRIAVWTASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY
IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWFLLPTCVIAIIGGMSTGTTAL
YGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFNLVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQ
VFNRGGRGGHYWFTHGWNLRAIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA
VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD

Sequences:

>Translated_533_residues
MSDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLSFRAGVLSILLGVIGGTCILA
PMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAFFSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLV
LIVCIYGFRFMLWVNRIAVWTASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY
IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWFLLPTCVIAIIGGMSTGTTAL
YGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFNLVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQ
VFNRGGRGGHYWFTHGWNLRAIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA
VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD
>Mature_532_residues
SDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLSFRAGVLSILLGVIGGTCILAP
MSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAFFSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLVL
IVCIYGFRFMLWVNRIAVWTASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARYI
PDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWFLLPTCVIAIIGGMSTGTTALY
GTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFNLVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQV
FNRGGRGGHYWFTHGWNLRAIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDAV
YGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 55724; Mature: 55593

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLS
CCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHCH
FRAGVLSILLGVIGGTCILAPMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLVLIVCIYGFRFMLWVNRIAVW
HHHHHCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCHH
LLPTCVIAIIGGMSTGTTALYGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFN
HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQVFNRGGRGGHYWFTHGWNLR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEE
AIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA
EHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCC
VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD
CCCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SDIPAEHAGMTSVEAFSFERIPDAARDARPIDLFRLLFGGCNTFSTSVLGSFPVLVGLS
CCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHCH
FRAGVLSILLGVIGGTCILAPMSLFGTCNGTNDPVSSGAHFGIHGRIVGSFLALLTSVAF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FSLAVWSSGDALVGGAHSLVGLPVNGATVGASYLVFAVLVLIVCIYGFRFMLWVNRIAVW
HHHHHCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASLMFAAGAVAFAGSFDAHYAGTLSTDSPGFWAAFCGAALVAMSNPVSFASTLGDWARY
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IPDTTPRYRVMGAVFVAQIATFVPFFFGLATATIIATRAPSFIAANDYVGGLLAVSPRWF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCHH
LLPTCVIAIIGGMSTGTTALYGTGLDVSSMVPKWLNRVSATVLIGTLAIGFIFIGRFAFN
HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVESVSTFSTLIGTFSCPWMAIMVIGYVTRRGHYLADDLQVFNRGGRGGHYWFTHGWNLR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEE
AIGAWLPAALIGLACVNLPGQFVGVLGNLGGGLDLSVPVSMVLGGGLYLLFLQLFPEPDA
EHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCC
VYGPAGRRFVRGRPGGAPALKAGAPLARDECDSAGLLSVRAVGDPAGRRGCPD
CCCCCCCCEECCCCCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]