| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024183
Identifier: 238024183
GI number: 238024183
Start: 924690
End: 925526
Strand: Reverse
Name: 238024183
Synonym: bglu_2g07620
Alternate gene names: NA
Gene position: 925526-924690 (Counterclockwise)
Preceding gene: 238024199
Following gene: 238024182
Centisome position: 32.73
GC content: 69.41
Gene sequence:
>837_bases ATGGCCGTCCAAGCCCATCACCCGCTTCCCGACTCCGCGCCGATCCCGCTCTCGTTCCAGACGCTCGGGCAGGTCATCGA ATCCGTTGGCAGCCCTGAATTCGTGCCGCGCCTGACCGTGCTGCTCAACGAGATCGTGCCCGTCAGCGTGGTGCATATCG AACGCTCGCGCGCCGACACGGCGATGCCGACCGGCTTTCGCTGCGAGTGGGTGGGCAGCGGCGGCGTGGGCATGGACAGC CGCACGATCGCCGAGGTGATGACGCTCTACTACGACCGCTTCTACGATCGCGATCCGCTGTTCGCGGGCATTCGCGGCGA GGTCGGCACGCTGCTGGTGGTGCGCGACATCGGCGCGATCCCGCCCGGGGAATTTCGCCAGCGTCTCTACGACGAGGTGC AGATCGCCCACGAATGCGTGCTGGCGCGCGGCACGCGCCACGCCCAGCATTCGATCGCGCTCGAGCGCGACACGCGGCAG CCGGCGTTCTCGCTGGCCGAGATGCAGCGGTTTCGCACCGTCAGCGACTGCCTGTTCCCGCTGCTCGAACTGCACGCCTC CACCACCGCCGCGAAGCGGATCGGCATCGCCCAGGTCACGCCGCACCTGCACCCGCTCGCGCTGTTCGATGCGCGCCTCG CGCGCGACCAGCCGCGGCTGTCACGGCGCGAGTACGAGATCTGCACCCACCTGATCGGCGGCAAGACCGTGCCCGAGGCC GCCGACATCCTCGGCGTGCGCGTGGCAACGGCCGAGTCCTACGTCAAACGCGCGTTCGCCAAGCTCGGCGTGCGCACCAA GCGCGACTTGATCCTCTGGGGCCAGGCCGGCGCCTGA
Upstream 100 bases:
>100_bases GCGCCCGCCGTGAGCCCAAAACGGGATCCGTACAACACCGGCGTTACGACCAGCGCCGGGCCTGACCTATAATTGCCCCG CCTTCATTCCGGCACGCAAT
Downstream 100 bases:
>100_bases GCCCCCGCCGCCGGGTTTCGCGTCATGCGCCAAACATCGCTCGCAATCGATGTGGACATCGCCATTTCGCGATTCGTCGC CCCTGCGAACTCCCCTACCA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein LuxR; LuxR Family Regulatory Protein; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator SyrR
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MAVQAHHPLPDSAPIPLSFQTLGQVIESVGSPEFVPRLTVLLNEIVPVSVVHIERSRADTAMPTGFRCEWVGSGGVGMDS RTIAEVMTLYYDRFYDRDPLFAGIRGEVGTLLVVRDIGAIPPGEFRQRLYDEVQIAHECVLARGTRHAQHSIALERDTRQ PAFSLAEMQRFRTVSDCLFPLLELHASTTAAKRIGIAQVTPHLHPLALFDARLARDQPRLSRREYEICTHLIGGKTVPEA ADILGVRVATAESYVKRAFAKLGVRTKRDLILWGQAGA
Sequences:
>Translated_278_residues MAVQAHHPLPDSAPIPLSFQTLGQVIESVGSPEFVPRLTVLLNEIVPVSVVHIERSRADTAMPTGFRCEWVGSGGVGMDS RTIAEVMTLYYDRFYDRDPLFAGIRGEVGTLLVVRDIGAIPPGEFRQRLYDEVQIAHECVLARGTRHAQHSIALERDTRQ PAFSLAEMQRFRTVSDCLFPLLELHASTTAAKRIGIAQVTPHLHPLALFDARLARDQPRLSRREYEICTHLIGGKTVPEA ADILGVRVATAESYVKRAFAKLGVRTKRDLILWGQAGA >Mature_277_residues AVQAHHPLPDSAPIPLSFQTLGQVIESVGSPEFVPRLTVLLNEIVPVSVVHIERSRADTAMPTGFRCEWVGSGGVGMDSR TIAEVMTLYYDRFYDRDPLFAGIRGEVGTLLVVRDIGAIPPGEFRQRLYDEVQIAHECVLARGTRHAQHSIALERDTRQP AFSLAEMQRFRTVSDCLFPLLELHASTTAAKRIGIAQVTPHLHPLALFDARLARDQPRLSRREYEICTHLIGGKTVPEAA DILGVRVATAESYVKRAFAKLGVRTKRDLILWGQAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30766; Mature: 30635
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQAHHPLPDSAPIPLSFQTLGQVIESVGSPEFVPRLTVLLNEIVPVSVVHIERSRADT CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEHHCCCC AMPTGFRCEWVGSGGVGMDSRTIAEVMTLYYDRFYDRDPLFAGIRGEVGTLLVVRDIGAI CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCC PPGEFRQRLYDEVQIAHECVLARGTRHAQHSIALERDTRQPAFSLAEMQRFRTVSDCLFP CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH LLELHASTTAAKRIGIAQVTPHLHPLALFDARLARDQPRLSRREYEICTHLIGGKTVPEA HHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCH ADILGVRVATAESYVKRAFAKLGVRTKRDLILWGQAGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC >Mature Secondary Structure AVQAHHPLPDSAPIPLSFQTLGQVIESVGSPEFVPRLTVLLNEIVPVSVVHIERSRADT CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEHHCCCC AMPTGFRCEWVGSGGVGMDSRTIAEVMTLYYDRFYDRDPLFAGIRGEVGTLLVVRDIGAI CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCC PPGEFRQRLYDEVQIAHECVLARGTRHAQHSIALERDTRQPAFSLAEMQRFRTVSDCLFP CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH LLELHASTTAAKRIGIAQVTPHLHPLALFDARLARDQPRLSRREYEICTHLIGGKTVPEA HHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCH ADILGVRVATAESYVKRAFAKLGVRTKRDLILWGQAGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA