Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024156

Identifier: 238024156

GI number: 238024156

Start: 878998

End: 880143

Strand: Reverse

Name: 238024156

Synonym: bglu_2g07340

Alternate gene names: NA

Gene position: 880143-878998 (Counterclockwise)

Preceding gene: 238024157

Following gene: 238024150

Centisome position: 31.13

GC content: 70.07

Gene sequence:

>1146_bases
ATGAATCCATCGCTTCTTGCCGACGCCCGGCAGCATTTCGAACAGACCCTGCGGATTTCCTTCGACGCGCTGCTCGCGCC
GGTCGAGATGTACCCGCCGTGCGGACGGCCGGCGCGCGAGTGCCGCAGCTACAGCCAGATCAACCAGGAGCGGCGCCATG
ACGACCCGAGCCTGCCGCTCGGGGCCTGGCAGCGCGACCTGAAGCGCACCGACTGGCTCAAGGTCAGCCATCTGGTCGCG
GACATGCTGCTCCACGACAGCAAGGACATGCAGCTGCTGGCCTGGCTCTACGAGGCGCAGATCAAGCAATACGGCTTCGC
CGGCATCGCGCCGACGCTGGTGCTGCTGCGCGAGATGGTCTCGCGCTACTGGAACGAGATCCACCCGTTCGGGAGCGAGG
GCGATTTCGAGCATCGCGCCAACCTGATCCGCTCGATCTCCGACAAGCATCTCGCGGCGCTGCGGCTCACGCCGCTGCTG
CGCCTGGAGGGCGGCAAGACCTATTGCTGGGCCGACTGGGAGCGCGCGCATCGCCATGAGCGCATGCGCGCCGGCGGCCA
TGCCGAGCTGCCCGCCGAGGGCGCCACGCTGGAGGAGCTGCAGGGGGCGCTGAACGCCACCGCGAGCGCCGATTTCCTGA
CGCTGCGCGCGCGGCTCTGCGACGCGCTGCAGGCGATCGCCGAGATGAGCGCGGCGCTCGATCCGCGCTTCGGCAACGAG
GCGCCGAGCATGGGCAAGACCATCGAGCTGCTGGAGACGATCCGCTCGCTGGTCGACGGCGAACTGCACACGCGCGGCGT
GCGCACCGAGCCTGAAGCGCCGCTGCAGGCCGATGCCACGGCCGATGACGCCGCGCCCGCTGCAACCGAGCCGCACGACA
CGCCGGGCGCGGCCGCCGCCGCGCCTGGGGGCGGCCCGATCGCGAGCCGCGCCGACGCCTACGCGCGCCTCGAGGAAATC
GCCGAGTACCTGATGCGCCAGGAGCCGCACAGCCCGGTGCCGTACCTGGTGCGGCGCGCCACGCTGTGGGGCCGCATGAA
CACGGCCGAGCTGTATCAGGAGCTGTTCCTGAGGCTCGGCGGGCAGCTGAACATCTTCGAGATGGTGGGGATCGAGAATC
CCGGCAGCCCCGAACGGCAGGCATAA

Upstream 100 bases:

>100_bases
TCCTCGGTATCCGGCTGTCGAACGTCAACGCGAAAACCCCGACGCCGCTGAAATTGCCGGCGGTATTCCCGATCTCGGTT
CCTCCCTTGACGCCACGACC

Downstream 100 bases:

>100_bases
GCGAAGCGGGCACGACGCGAGGGCACCGACATGCAGAACCCCATCCTGACCATCGACACCGGAGATTCGGCGCGAGGCCG
CGAGCCGTCTGCCGGCGACG

Product: type VI secretion system protein EvpK

Products: NA

Alternate protein names: ImpA N-Terminal; ImpA Family Type VI Secretion-Associated Protein; ImpA Domain-Containing Protein; ImpA-Like; ImpA-Like N-Terminal Family Protein; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Protein TssA; Type VI Secretion System Protein EvpK; ImpA Domain Protein; ImpA-Related N-Terminal Domain-Containing; ImpA-Related Protein; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPLGAWQRDLKRTDWLKVSHLVA
DMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMVSRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLL
RLEGGKTYCWADWERAHRHERMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE
APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAAAPGGGPIASRADAYARLEEI
AEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLGGQLNIFEMVGIENPGSPERQA

Sequences:

>Translated_381_residues
MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPLGAWQRDLKRTDWLKVSHLVA
DMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMVSRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLL
RLEGGKTYCWADWERAHRHERMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE
APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAAAPGGGPIASRADAYARLEEI
AEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLGGQLNIFEMVGIENPGSPERQA
>Mature_381_residues
MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPLGAWQRDLKRTDWLKVSHLVA
DMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMVSRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLL
RLEGGKTYCWADWERAHRHERMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE
APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAAAPGGGPIASRADAYARLEEI
AEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLGGQLNIFEMVGIENPGSPERQA

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42439; Mature: 42439

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
GAWQRDLKRTDWLKVSHLVADMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLLRLEGGKTYCWADWERAHRHE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCHHHHHHHH
RMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAA
CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APGGGPIASRADAYARLEEIAEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GQLNIFEMVGIENPGSPERQA
CCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNPSLLADARQHFEQTLRISFDALLAPVEMYPPCGRPARECRSYSQINQERRHDDPSLPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
GAWQRDLKRTDWLKVSHLVADMLLHDSKDMQLLAWLYEAQIKQYGFAGIAPTLVLLREMV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SRYWNEIHPFGSEGDFEHRANLIRSISDKHLAALRLTPLLRLEGGKTYCWADWERAHRHE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCHHHHHHHH
RMRAGGHAELPAEGATLEELQGALNATASADFLTLRARLCDALQAIAEMSAALDPRFGNE
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APSMGKTIELLETIRSLVDGELHTRGVRTEPEAPLQADATADDAAPAATEPHDTPGAAAA
CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APGGGPIASRADAYARLEEIAEYLMRQEPHSPVPYLVRRATLWGRMNTAELYQELFLRLG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
GQLNIFEMVGIENPGSPERQA
CCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA