Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is lhr [C]

Identifier: 238024153

GI number: 238024153

Start: 869100

End: 871892

Strand: Direct

Name: lhr [C]

Synonym: bglu_2g07310

Alternate gene names: 238024153

Gene position: 869100-871892 (Clockwise)

Preceding gene: 238024152

Following gene: 238024154

Centisome position: 30.74

GC content: 74.79

Gene sequence:

>2793_bases
ATGAGCGGGGCGCGCGGCACCGGCGAGCGGCACGGCCGTGAACACGATGGCGCCGCTGCCGGCGGCGATCCCGCCGCGTC
GCGCGACGCCGCGGATGCGGCGGATGCGCAGCGCCGCCGGCCGCGCGGGCGCCGCATGCCGCGCACGCGCGCGGCGCAGG
CCAAGCTCGATGCGGCCGCCCAGGCGTTTCGGCCCGCGCCGTTCGCCTTCGACGCGGCCGCCGCGCGCCGGCCGATCGGG
CCGCGCATCGCGGCGTGGCTGGCGGCGCAGGACCGGCAGCCGTTCGCGTTCCAGGAGGAGGTCTGGCGCGAGATCGCACG
CGGCGCGAGCGGGCTGCTGCATGCCACCACGGGGGCCGGCAAGACCTGGGCGGTCTGGCTCGGCGCGCTGGCCGCCTATG
CGGGCGACGAGGGGGGCGGCGCCGCCGCTGCCGACGGCGCGGATCTCGACGGCGCGGATCTCGACGGCGCGCGCGCGGCC
CCTGCGGAGCCGTGCGCGCCGGCCGCCGTGCGCGCGGGCCGCCTGCCGGCGCCGCTGACCGTGCTCTGGGTCACGCCGAT
GCGCGCGCTCGCGGCCGACACGGCGCGTGCCCTGCAAGCGGCCGTGTCGGGCCTCGGCGTGCCGTGGACGGTGGGGCTGC
GCACCGGCGACACGCCATCGGCCGAGCGCAGCCGGCAGAACCGCCGCCTGCCGTCGGCGCTCGTCACCACGCCCGAGAGC
CTGTCGCTGCTGCTCACGCGCGCCGACGCGCGCGAGACGCTCGCGCGGCTGCGGCTGGTGGTGGTGGACGAGTGGCACGA
ACTGCTCGGCAACAAGCGCGGCACCCAGACCCAGCTCGCCCTCGCGCGGCTCGCCGGCTGGCGCCCGGCATTGCAGGTAT
GGGGGCTGTCGGCCACGCTCGGCAATCTCGCGCTCGCGCACGACGCGCTGCTGCACGCGGTGCGCACGCCGCGCGTGATG
GTGCGCGGCGCGCAGCCGAAGCCGCTGGTGGTCGATACGCTGATACCCGAGACCATCGAGCGCTTCCCGTGGGCCGGCCA
TCTCGGCATGCGGCAGGTGGGCGCCGTGGCCGACCAGATCGACGCCGCGCGCAGCTCGCTGGTGTTCACCAACACGCGCT
CGCAGGCGGAAGGCTGGTATCAGGCGCTGCTTGAACGGCGGCCCGACTGGGCCGGGCTGATCGCGCTGCATCACGGCTCG
CTCGACCAGTCGGTGCGCGACTGGGTCGAACTCGGCCTCAAGAACGGCAAGCTCAAGGCCGTGGTCTGCACCTCGAGCCT
CGACCTCGGGGTCGATTTCCTGCCGGTCGAGCGCGTGTTCCAGATCGGCTCGCCGAAGGGCGTGGCGCGCCTGATGCAGC
GCGCCGGCCGCTCGGGCCACGCGCCCGGCCGCACCTCGCGCGTGACCATCGTGCCGACCCATGCGCTGGAGCTGGTGGAG
GCCGCCGCCGCGCGCTGGGCCATCGGCGCGGGCCGCATCGAGGGGCGCGAGATGCCGCTCAAGCCGCTCGACGTGCTGGT
GCAGCATCTGGTGACGGTGGCGATCGGCGGCGGCTTCAGGCCGCGCGCGCTCTACGACGAGGTGCGCACGGCCTACGCCT
ATCGCGATCTCGCGCAGGCCGAGTTCGACTGGGCACTGGCCTTCGTCGAGCGCGGCGGCGCCTCGCTGTCGGCCTATCCC
GACTATCACCGCGTGGCGGCCGATGCCGACGGCGTCTATCGCGTGCCGCGCGAGGACCTGGCGCGGCGGCATCGCAACAA
CGTCGGCACGATCGTGGCCAATGCCAGCATCAACGTGGCCTGGCTGACGGGCGGGCGCATCGGCACGATCGAGGAGGCAT
TCGTCTCGCGCCTGAAGCCCGGCGACGTCTTCACCTTCGCCGGCCGCGCGCTCGAACTCGTGCGCGTGCGCGACATGACG
GCCTACGTGCGGCGCGCGGCCCGCTCGCGCGGCGCGCTCGCGCAATGGGCGGGCAGCCGGATGCCGCTGTCGTCGGAACT
GGCCGACGCGGTGCTGGTGATGCTCGCGCGCGCGCGCGACGGCGCGGCCGACGGCGAACCGGAGCTGCGCGCGGTGGCGC
CGCTGCTGGCGCTGCAGGCACGCTGGTCGGCGCTGCCGGGCCCCGGCGTGCTGGTGGTCGAGTGCCTGCGCACGCGCGAG
GGCCATCACCTGTTCTGCTATCCGTTCGCCGGCCGCATGGCGCATGTCGGGCTCGGCGCGCTGATCGCGTGGCGCGTCGC
GCGCGAGCAGCCCAGCACGTTCTCGATCTCGGTGAACGACTACGGCTTCGAACTGCTGTCGGCGCAGCCTTTCGACTGGC
CGGCGCTGATCGACGGCGGCCTGTTTTCGCCGGACCGGCTGGAGCAGGACATGCTCGCGAGCCTCAACGCCTCCGAGCTG
GCCGCGCGCCGGTTCCGGGAGATCGCGCGCGTCTCGGGGCTGGTGTTCCAGGGCCATCCCGGGCAGCAGAAGAGCGCGCG
CCAGCTGCAGGCGTCGAGCAGCCTGTTCTACGAGGTGTTCCGCCAGCACGACCGCGAGAACCTGCTGCTCGCGCAGGCCG
AGCGCGAGGTCATGCTGGAGGAGCTCGAGGCGCGGCGCATCCGGGACGCGCTCTCGCGCATGCGCGAGAGCCGGCTGGTG
CTGACGCAGCCGGCCCGGCCCACGCCGTTCGCGTTTCCGCTGATCGTCGCGCGCCTGCGCGAGAAGGTCAGCACCGAGCA
ACTGGCCGATCGCGTCGAGCGCATGCTGGCGGCGCTCGAGAATACGGCGCGGCGCGAGGCGGCGCATGACTGA

Upstream 100 bases:

>100_bases
CCGTGCGGTTCCCGCGCATGCTGCGCTGGCGCACCGACAAGTCGATCGACGAGGCGGACACGCTGGAGATGCTCAAGGGC
TTTCTGAACGGAGCGCCGGC

Downstream 100 bases:

>100_bases
GGAGACCCTGACGATCGAGCTGGCCGGGCATGCGCTGCAGCTGTCGGCCGGGCGCGCGGCGTTCGATCCGGCGCGGCGCA
GCCTGTTCGTGGCGGACGCG

Product: putative DEAD/DEAH box helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 930; Mature: 929

Protein sequence:

>930_residues
MSGARGTGERHGREHDGAAAGGDPAASRDAADAADAQRRRPRGRRMPRTRAAQAKLDAAAQAFRPAPFAFDAAAARRPIG
PRIAAWLAAQDRQPFAFQEEVWREIARGASGLLHATTGAGKTWAVWLGALAAYAGDEGGGAAAADGADLDGADLDGARAA
PAEPCAPAAVRAGRLPAPLTVLWVTPMRALAADTARALQAAVSGLGVPWTVGLRTGDTPSAERSRQNRRLPSALVTTPES
LSLLLTRADARETLARLRLVVVDEWHELLGNKRGTQTQLALARLAGWRPALQVWGLSATLGNLALAHDALLHAVRTPRVM
VRGAQPKPLVVDTLIPETIERFPWAGHLGMRQVGAVADQIDAARSSLVFTNTRSQAEGWYQALLERRPDWAGLIALHHGS
LDQSVRDWVELGLKNGKLKAVVCTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGRTSRVTIVPTHALELVE
AAAARWAIGAGRIEGREMPLKPLDVLVQHLVTVAIGGGFRPRALYDEVRTAYAYRDLAQAEFDWALAFVERGGASLSAYP
DYHRVAADADGVYRVPREDLARRHRNNVGTIVANASINVAWLTGGRIGTIEEAFVSRLKPGDVFTFAGRALELVRVRDMT
AYVRRAARSRGALAQWAGSRMPLSSELADAVLVMLARARDGAADGEPELRAVAPLLALQARWSALPGPGVLVVECLRTRE
GHHLFCYPFAGRMAHVGLGALIAWRVAREQPSTFSISVNDYGFELLSAQPFDWPALIDGGLFSPDRLEQDMLASLNASEL
AARRFREIARVSGLVFQGHPGQQKSARQLQASSSLFYEVFRQHDRENLLLAQAEREVMLEELEARRIRDALSRMRESRLV
LTQPARPTPFAFPLIVARLREKVSTEQLADRVERMLAALENTARREAAHD

Sequences:

>Translated_930_residues
MSGARGTGERHGREHDGAAAGGDPAASRDAADAADAQRRRPRGRRMPRTRAAQAKLDAAAQAFRPAPFAFDAAAARRPIG
PRIAAWLAAQDRQPFAFQEEVWREIARGASGLLHATTGAGKTWAVWLGALAAYAGDEGGGAAAADGADLDGADLDGARAA
PAEPCAPAAVRAGRLPAPLTVLWVTPMRALAADTARALQAAVSGLGVPWTVGLRTGDTPSAERSRQNRRLPSALVTTPES
LSLLLTRADARETLARLRLVVVDEWHELLGNKRGTQTQLALARLAGWRPALQVWGLSATLGNLALAHDALLHAVRTPRVM
VRGAQPKPLVVDTLIPETIERFPWAGHLGMRQVGAVADQIDAARSSLVFTNTRSQAEGWYQALLERRPDWAGLIALHHGS
LDQSVRDWVELGLKNGKLKAVVCTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGRTSRVTIVPTHALELVE
AAAARWAIGAGRIEGREMPLKPLDVLVQHLVTVAIGGGFRPRALYDEVRTAYAYRDLAQAEFDWALAFVERGGASLSAYP
DYHRVAADADGVYRVPREDLARRHRNNVGTIVANASINVAWLTGGRIGTIEEAFVSRLKPGDVFTFAGRALELVRVRDMT
AYVRRAARSRGALAQWAGSRMPLSSELADAVLVMLARARDGAADGEPELRAVAPLLALQARWSALPGPGVLVVECLRTRE
GHHLFCYPFAGRMAHVGLGALIAWRVAREQPSTFSISVNDYGFELLSAQPFDWPALIDGGLFSPDRLEQDMLASLNASEL
AARRFREIARVSGLVFQGHPGQQKSARQLQASSSLFYEVFRQHDRENLLLAQAEREVMLEELEARRIRDALSRMRESRLV
LTQPARPTPFAFPLIVARLREKVSTEQLADRVERMLAALENTARREAAHD
>Mature_929_residues
SGARGTGERHGREHDGAAAGGDPAASRDAADAADAQRRRPRGRRMPRTRAAQAKLDAAAQAFRPAPFAFDAAAARRPIGP
RIAAWLAAQDRQPFAFQEEVWREIARGASGLLHATTGAGKTWAVWLGALAAYAGDEGGGAAAADGADLDGADLDGARAAP
AEPCAPAAVRAGRLPAPLTVLWVTPMRALAADTARALQAAVSGLGVPWTVGLRTGDTPSAERSRQNRRLPSALVTTPESL
SLLLTRADARETLARLRLVVVDEWHELLGNKRGTQTQLALARLAGWRPALQVWGLSATLGNLALAHDALLHAVRTPRVMV
RGAQPKPLVVDTLIPETIERFPWAGHLGMRQVGAVADQIDAARSSLVFTNTRSQAEGWYQALLERRPDWAGLIALHHGSL
DQSVRDWVELGLKNGKLKAVVCTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGRTSRVTIVPTHALELVEA
AAARWAIGAGRIEGREMPLKPLDVLVQHLVTVAIGGGFRPRALYDEVRTAYAYRDLAQAEFDWALAFVERGGASLSAYPD
YHRVAADADGVYRVPREDLARRHRNNVGTIVANASINVAWLTGGRIGTIEEAFVSRLKPGDVFTFAGRALELVRVRDMTA
YVRRAARSRGALAQWAGSRMPLSSELADAVLVMLARARDGAADGEPELRAVAPLLALQARWSALPGPGVLVVECLRTREG
HHLFCYPFAGRMAHVGLGALIAWRVAREQPSTFSISVNDYGFELLSAQPFDWPALIDGGLFSPDRLEQDMLASLNASELA
ARRFREIARVSGLVFQGHPGQQKSARQLQASSSLFYEVFRQHDRENLLLAQAEREVMLEELEARRIRDALSRMRESRLVL
TQPARPTPFAFPLIVARLREKVSTEQLADRVERMLAALENTARREAAHD

Specific function: Unknown

COG id: COG1201

COG function: function code R; Lhr-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787942, Length=903, Percent_Identity=27.4640088593577, Blast_Score=199, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR013701
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR017170 [H]

Pfam domain/function: PF00270 DEAD; PF08494 DEAD_assoc; PF00271 Helicase_C [H]

EC number: 3.6.1.-

Molecular weight: Translated: 100823; Mature: 100692

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGARGTGERHGREHDGAAAGGDPAASRDAADAADAQRRRPRGRRMPRTRAAQAKLDAAA
CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QAFRPAPFAFDAAAARRPIGPRIAAWLAAQDRQPFAFQEEVWREIARGASGLLHATTGAG
HHCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCC
KTWAVWLGALAAYAGDEGGGAAAADGADLDGADLDGARAAPAEPCAPAAVRAGRLPAPLT
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE
VLWVTPMRALAADTARALQAAVSGLGVPWTVGLRTGDTPSAERSRQNRRLPSALVTTPES
EEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHCCCHH
LSLLLTRADARETLARLRLVVVDEWHELLGNKRGTQTQLALARLAGWRPALQVWGLSATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCHHHHH
GNLALAHDALLHAVRTPRVMVRGAQPKPLVVDTLIPETIERFPWAGHLGMRQVGAVADQI
HHHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
DAARSSLVFTNTRSQAEGWYQALLERRPDWAGLIALHHGSLDQSVRDWVELGLKNGKLKA
HHHHHCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEE
VVCTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGRTSRVTIVPTHALELVE
EEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHH
AAAARWAIGAGRIEGREMPLKPLDVLVQHLVTVAIGGGFRPRALYDEVRTAYAYRDLAQA
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
EFDWALAFVERGGASLSAYPDYHRVAADADGVYRVPREDLARRHRNNVGTIVANASINVA
HHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEECCHHHHHHHHCCCCEEEEEECEEEEE
WLTGGRIGTIEEAFVSRLKPGDVFTFAGRALELVRVRDMTAYVRRAARSRGALAQWAGSR
EEECCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
MPLSSELADAVLVMLARARDGAADGEPELRAVAPLLALQARWSALPGPGVLVVECLRTRE
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
GHHLFCYPFAGRMAHVGLGALIAWRVAREQPSTFSISVNDYGFELLSAQPFDWPALIDGG
CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCHHHHCCC
LFSPDRLEQDMLASLNASELAARRFREIARVSGLVFQGHPGQQKSARQLQASSSLFYEVF
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHH
RQHDRENLLLAQAEREVMLEELEARRIRDALSRMRESRLVLTQPARPTPFAFPLIVARLR
HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH
EKVSTEQLADRVERMLAALENTARREAAHD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SGARGTGERHGREHDGAAAGGDPAASRDAADAADAQRRRPRGRRMPRTRAAQAKLDAAA
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QAFRPAPFAFDAAAARRPIGPRIAAWLAAQDRQPFAFQEEVWREIARGASGLLHATTGAG
HHCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCC
KTWAVWLGALAAYAGDEGGGAAAADGADLDGADLDGARAAPAEPCAPAAVRAGRLPAPLT
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE
VLWVTPMRALAADTARALQAAVSGLGVPWTVGLRTGDTPSAERSRQNRRLPSALVTTPES
EEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHCCCHH
LSLLLTRADARETLARLRLVVVDEWHELLGNKRGTQTQLALARLAGWRPALQVWGLSATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCHHHHH
GNLALAHDALLHAVRTPRVMVRGAQPKPLVVDTLIPETIERFPWAGHLGMRQVGAVADQI
HHHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
DAARSSLVFTNTRSQAEGWYQALLERRPDWAGLIALHHGSLDQSVRDWVELGLKNGKLKA
HHHHHCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEE
VVCTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGRTSRVTIVPTHALELVE
EEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHH
AAAARWAIGAGRIEGREMPLKPLDVLVQHLVTVAIGGGFRPRALYDEVRTAYAYRDLAQA
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
EFDWALAFVERGGASLSAYPDYHRVAADADGVYRVPREDLARRHRNNVGTIVANASINVA
HHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEECCHHHHHHHHCCCCEEEEEECEEEEE
WLTGGRIGTIEEAFVSRLKPGDVFTFAGRALELVRVRDMTAYVRRAARSRGALAQWAGSR
EEECCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
MPLSSELADAVLVMLARARDGAADGEPELRAVAPLLALQARWSALPGPGVLVVECLRTRE
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
GHHLFCYPFAGRMAHVGLGALIAWRVAREQPSTFSISVNDYGFELLSAQPFDWPALIDGG
CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCHHHHCCC
LFSPDRLEQDMLASLNASELAARRFREIARVSGLVFQGHPGQQKSARQLQASSSLFYEVF
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHH
RQHDRENLLLAQAEREVMLEELEARRIRDALSRMRESRLVLTQPARPTPFAFPLIVARLR
HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH
EKVSTEQLADRVERMLAALENTARREAAHD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]