| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024054
Identifier: 238024054
GI number: 238024054
Start: 739217
End: 739735
Strand: Direct
Name: 238024054
Synonym: bglu_2g06140
Alternate gene names: NA
Gene position: 739217-739735 (Clockwise)
Preceding gene: 238024053
Following gene: 238024060
Centisome position: 26.15
GC content: 72.83
Gene sequence:
>519_bases CTGACGATGGCCACCGGCACCCCCGACGCGCCCGTTATCGGCCCGACGCTCCATCGCGACGTCGTGCGCGCCGAATGGGT CGACTACAACGGGCACCTGCGCGACGCGTTCTATCTGCTGATCTTCAGCTTCGCGACCGATGCGCTGATCGAGCGGATCG GCCTGGACGGCGCGGCGCGGCTCGCTCGGCAGCGTTCCGTCTACACCCTGGAGGCACACGTGAGCTACCTGCGCGAGATC CGGCTCGGCACGGCCGTGCGCGTCGACGCGAGGGTCCTGGCCGTGGATGCGAAGCGCGTGCATCTGTACCTGGAGATGTT CGCGGACGGCTGCGGCGGCGCCGTCGCCGCGAGCGAGCAGATGCTGATGCATATCGACACGCGCGTGTCGCGCGGCGCGC CGTTCGACGCCGACGTGGCCGCGCGGCTGGCCGGCCTGGTGGCCGCGCAGCGCAACCGGCCGGCGCCCGCTCATGCCGGC CGCGTGATCGGCCTGCCGCCGCCGCGCGCGGTGCGCTGA
Upstream 100 bases:
>100_bases GCAGCATCAAGGCACTCGAACGCTATCGCGACGACTGCATCACCGAGGTGATCGCCGCGGTCGCGCGCGTGAAGGCGCGC CACGGCATGCGCGACGAGGA
Downstream 100 bases:
>100_bases GGGCGGCGATGGCCCGCGGGGCGCAGCCCGCCGGCTTCGTGGCGCGCACTCGACCTCGGGCAGAGGTTCGGGCGTGCCGG CGTAGCGTGCCTGGACCGGA
Product: thioesterase-like protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; Thioesterase-Like Protein; 3-Hydroxyacyl-CoA Dehydrogenase C-Terminal Domain Family; 3-Hydroxyacyl-CoA Dehydrogenase Protein; Thioesterase-Like; Lipolytic G-D-S-L; 3-Hydroxybutyryl-CoA Dehydrogenase; Thioesterase Family Protein; 4-Hydroxybenzoyl-CoA Thioesterase
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTMATGTPDAPVIGPTLHRDVVRAEWVDYNGHLRDAFYLLIFSFATDALIERIGLDGAARLARQRSVYTLEAHVSYLREI RLGTAVRVDARVLAVDAKRVHLYLEMFADGCGGAVAASEQMLMHIDTRVSRGAPFDADVAARLAGLVAAQRNRPAPAHAG RVIGLPPPRAVR
Sequences:
>Translated_172_residues MTMATGTPDAPVIGPTLHRDVVRAEWVDYNGHLRDAFYLLIFSFATDALIERIGLDGAARLARQRSVYTLEAHVSYLREI RLGTAVRVDARVLAVDAKRVHLYLEMFADGCGGAVAASEQMLMHIDTRVSRGAPFDADVAARLAGLVAAQRNRPAPAHAG RVIGLPPPRAVR >Mature_171_residues TMATGTPDAPVIGPTLHRDVVRAEWVDYNGHLRDAFYLLIFSFATDALIERIGLDGAARLARQRSVYTLEAHVSYLREIR LGTAVRVDARVLAVDAKRVHLYLEMFADGCGGAVAASEQMLMHIDTRVSRGAPFDADVAARLAGLVAAQRNRPAPAHAGR VIGLPPPRAVR
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18681; Mature: 18550
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMATGTPDAPVIGPTLHRDVVRAEWVDYNGHLRDAFYLLIFSFATDALIERIGLDGAAR CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH LARQRSVYTLEAHVSYLREIRLGTAVRVDARVLAVDAKRVHLYLEMFADGCGGAVAASEQ HHHHCCEEEHHHHHHHHHHHHCCCEEEECEEEEEECHHHHHHHHHHHHCCCCCCHHHHHH MLMHIDTRVSRGAPFDADVAARLAGLVAAQRNRPAPAHAGRVIGLPPPRAVR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure TMATGTPDAPVIGPTLHRDVVRAEWVDYNGHLRDAFYLLIFSFATDALIERIGLDGAAR CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH LARQRSVYTLEAHVSYLREIRLGTAVRVDARVLAVDAKRVHLYLEMFADGCGGAVAASEQ HHHHCCEEEHHHHHHHHHHHHCCCEEEECEEEEEECHHHHHHHHHHHHCCCCCCHHHHHH MLMHIDTRVSRGAPFDADVAARLAGLVAAQRNRPAPAHAGRVIGLPPPRAVR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA