| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024019
Identifier: 238024019
GI number: 238024019
Start: 690160
End: 690924
Strand: Direct
Name: 238024019
Synonym: bglu_2g05730
Alternate gene names: NA
Gene position: 690160-690924 (Clockwise)
Preceding gene: 238024018
Following gene: 238024020
Centisome position: 24.41
GC content: 63.4
Gene sequence:
>765_bases ATGAGCGAATTCGTTCAATCCCTGCGCGACAAGATCAACAGCCGAAAGAAGATGACCAGCCGGCTCTACCAGACGGTGCT GGCCGGCAAGGCGAGCAAGCACCTGCTGCAGAATTTCGTGATTCACCGCTTCCCGATCAAGAACCACTGGACGCGCAACA TTCTCGGCATCGCGTCGCGCATTCCCGACCACCAGTTGCGCGTCGAACTGGTGGAGAACGTATTCGAGGAGGAGACCGGC CATTTCAGCCACTCGAAACGTCACCTCGAAACTTTCGTCGACTTCGGCAAGGCGCTCGGCGTGACGCAGCGCGACATCGA CACCGCGCCGATGCTGCCGCAGACGCAGGCCGTGATCGACCACAACGTCGAGGCCTGCAACACCACGGTCCACTTCACGG CCGGGGTGGCCTCGGTGCTGCTGCTGATGGAAGGCCAGCCGCCCGTCGTGTCGGCCGGCAACCAGTCGATGCTGTCGGTG ATGCGCGACGTTTACCGCTTGCCGCCCGAGGGCTACGAGTTCTTCGTTCACCATGCGAGCGCGGTCGAACGTGCGGGCGG CGACCACACGGCCGTCAGCGACCTCGAGGAGGATCATGCCGAGACGGCCGAGATCTTGCTCGATACCTACTGCACGACCG ACGAGCTGCGCATCCAGGCGCATCGCTATCTCGATCGCGCGATCGACCGGCGCCACGCGCACTTCGACGCGATCTACGAG CAGTTCCATGATCCGGCGGCCGAGCCGTTCCGCTACGCAGCCTGA
Upstream 100 bases:
>100_bases AAGGAGCGCCTCGACAACGTCTTTTACGGCCGCAACAACCTGAACATCGACAAGATCAAGTCCCTCGAGTCCCGACCCTC CCACTGACAGGAACCGCACC
Downstream 100 bases:
>100_bases GCCAGGACGAGGAGATTCGGTTTGGCAAAAATCATCTTCCATGCCGGCGATTACGTCGACGCATCGCAGGCGACGGTGCG CGTCTCGTCGCTGGCGATGC
Product: putative coenzyme PQQ synthesis protein c
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSEFVQSLRDKINSRKKMTSRLYQTVLAGKASKHLLQNFVIHRFPIKNHWTRNILGIASRIPDHQLRVELVENVFEEETG HFSHSKRHLETFVDFGKALGVTQRDIDTAPMLPQTQAVIDHNVEACNTTVHFTAGVASVLLLMEGQPPVVSAGNQSMLSV MRDVYRLPPEGYEFFVHHASAVERAGGDHTAVSDLEEDHAETAEILLDTYCTTDELRIQAHRYLDRAIDRRHAHFDAIYE QFHDPAAEPFRYAA
Sequences:
>Translated_254_residues MSEFVQSLRDKINSRKKMTSRLYQTVLAGKASKHLLQNFVIHRFPIKNHWTRNILGIASRIPDHQLRVELVENVFEEETG HFSHSKRHLETFVDFGKALGVTQRDIDTAPMLPQTQAVIDHNVEACNTTVHFTAGVASVLLLMEGQPPVVSAGNQSMLSV MRDVYRLPPEGYEFFVHHASAVERAGGDHTAVSDLEEDHAETAEILLDTYCTTDELRIQAHRYLDRAIDRRHAHFDAIYE QFHDPAAEPFRYAA >Mature_253_residues SEFVQSLRDKINSRKKMTSRLYQTVLAGKASKHLLQNFVIHRFPIKNHWTRNILGIASRIPDHQLRVELVENVFEEETGH FSHSKRHLETFVDFGKALGVTQRDIDTAPMLPQTQAVIDHNVEACNTTVHFTAGVASVLLLMEGQPPVVSAGNQSMLSVM RDVYRLPPEGYEFFVHHASAVERAGGDHTAVSDLEEDHAETAEILLDTYCTTDELRIQAHRYLDRAIDRRHAHFDAIYEQ FHDPAAEPFRYAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28897; Mature: 28766
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFVQSLRDKINSRKKMTSRLYQTVLAGKASKHLLQNFVIHRFPIKNHWTRNILGIASR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IPDHQLRVELVENVFEEETGHFSHSKRHLETFVDFGKALGVTQRDIDTAPMLPQTQAVID CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHH HNVEACNTTVHFTAGVASVLLLMEGQPPVVSAGNQSMLSVMRDVYRLPPEGYEFFVHHAS CCHHHHCCCEEHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHH AVERAGGDHTAVSDLEEDHAETAEILLDTYCTTDELRIQAHRYLDRAIDRRHAHFDAIYE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QFHDPAAEPFRYAA HHCCCCCCCCCCCC >Mature Secondary Structure SEFVQSLRDKINSRKKMTSRLYQTVLAGKASKHLLQNFVIHRFPIKNHWTRNILGIASR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IPDHQLRVELVENVFEEETGHFSHSKRHLETFVDFGKALGVTQRDIDTAPMLPQTQAVID CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHH HNVEACNTTVHFTAGVASVLLLMEGQPPVVSAGNQSMLSVMRDVYRLPPEGYEFFVHHAS CCHHHHCCCEEHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHH AVERAGGDHTAVSDLEEDHAETAEILLDTYCTTDELRIQAHRYLDRAIDRRHAHFDAIYE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QFHDPAAEPFRYAA HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA