| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is mhpE [H]
Identifier: 238024018
GI number: 238024018
Start: 689229
End: 690146
Strand: Direct
Name: mhpE [H]
Synonym: bglu_2g05720
Alternate gene names: 238024018
Gene position: 689229-690146 (Clockwise)
Preceding gene: 238024017
Following gene: 238024019
Centisome position: 24.38
GC content: 67.86
Gene sequence:
>918_bases ATGACCTTGCTGTCGAATCAGGCGCATTGCGCGCGCGCCGTCACGCTGCTCGACTGCACCCTGCGGGACGGCGGTTACCT CAATGGCCATGATTTTTCCGCGCCGCAGATCGACGCGATCCTGACGCGGCTGCTCGCCTCGGGCGTGGATGTGATCGAGG TCGGCTATTTCCGGCGGCGCAACGTCGAACGGCACCCGTCCACGGTTATCGCACGCTGCCCGCCCGCCTTCCTCGCTTCG CTGGCGCGCACGCAAGCTGTCCGCTATGCGGTGATGGTGCCGCCCGGCGACGCCGAGCCGGCCGATCTCGACGAACTCGC CGAGTTGCCGGTCTCGGTGGTCCGCTTCACCTGCACCGACCAGAACCTGCCGAAGGTGCTCGCGCTCGGCGAGCGCGCCG CGCGGCTCGGTCTCGTGGTCTGCGCCAACATCACGCGGGTGAGCGAGCGCTCGCACTCGCAGCTCGCCGCGCTCACGCGC GCCCTGGCCGAGGCCGGCTTCGACACGGTCTACGCGGCCGATTCGAACGGCGCGCTCTACCCGGACGAGGTCGCCGCGAT CGTCGGCGAGATGCGCCGTCATTTCACCGGCCAGATCGGCTTTCATGCGCACGACTCGCTGCATCTGGCGTTCGCGAACG CCCTGGCCGCGATGCGCGCGGGCGCGTCGTGGGTCGACGGCACGATCGGCGGAGTCGGCAAGGGTGGCGGCAACGCGGCG ATCGAGGTGCTGCTCTCGGAGCTCGCGAAGGCCGATTCACGGCCGATCGACATCGCCGGATTCTCGCAGATGCCGGCGAG CTTTCCGCACGACTTCTTTCCGGTGCGTTTCAAGGAGCGCCTCGACAACGTCTTTTACGGCCGCAACAACCTGAACATCG ACAAGATCAAGTCCCTCGAGTCCCGACCCTCCCACTGA
Upstream 100 bases:
>100_bases GCTCAACTTTCCGTCTGTTTGCGGCCGGCGAGTGAGGTATTGCACTCGGCATGCATGATGATGCGCGTAATACGCGCGTT CGAATCGTGGAGTTCAGGCT
Downstream 100 bases:
>100_bases CAGGAACCGCACCATGAGCGAATTCGTTCAATCCCTGCGCGACAAGATCAACAGCCGAAAGAAGATGACCAGCCGGCTCT ACCAGACGGTGCTGGCCGGC
Product: MhpE-like protein
Products: NA
Alternate protein names: HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTLLSNQAHCARAVTLLDCTLRDGGYLNGHDFSAPQIDAILTRLLASGVDVIEVGYFRRRNVERHPSTVIARCPPAFLAS LARTQAVRYAVMVPPGDAEPADLDELAELPVSVVRFTCTDQNLPKVLALGERAARLGLVVCANITRVSERSHSQLAALTR ALAEAGFDTVYAADSNGALYPDEVAAIVGEMRRHFTGQIGFHAHDSLHLAFANALAAMRAGASWVDGTIGGVGKGGGNAA IEVLLSELAKADSRPIDIAGFSQMPASFPHDFFPVRFKERLDNVFYGRNNLNIDKIKSLESRPSH
Sequences:
>Translated_305_residues MTLLSNQAHCARAVTLLDCTLRDGGYLNGHDFSAPQIDAILTRLLASGVDVIEVGYFRRRNVERHPSTVIARCPPAFLAS LARTQAVRYAVMVPPGDAEPADLDELAELPVSVVRFTCTDQNLPKVLALGERAARLGLVVCANITRVSERSHSQLAALTR ALAEAGFDTVYAADSNGALYPDEVAAIVGEMRRHFTGQIGFHAHDSLHLAFANALAAMRAGASWVDGTIGGVGKGGGNAA IEVLLSELAKADSRPIDIAGFSQMPASFPHDFFPVRFKERLDNVFYGRNNLNIDKIKSLESRPSH >Mature_304_residues TLLSNQAHCARAVTLLDCTLRDGGYLNGHDFSAPQIDAILTRLLASGVDVIEVGYFRRRNVERHPSTVIARCPPAFLASL ARTQAVRYAVMVPPGDAEPADLDELAELPVSVVRFTCTDQNLPKVLALGERAARLGLVVCANITRVSERSHSQLAALTRA LAEAGFDTVYAADSNGALYPDEVAAIVGEMRRHFTGQIGFHAHDSLHLAFANALAAMRAGASWVDGTIGGVGKGGGNAAI EVLLSELAKADSRPIDIAGFSQMPASFPHDFFPVRFKERLDNVFYGRNNLNIDKIKSLESRPSH
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1786261, Length=270, Percent_Identity=26.6666666666667, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - ProDom: PD005364 [H]
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like [H]
EC number: =4.1.3.39 [H]
Molecular weight: Translated: 32831; Mature: 32699
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS50991 PYR_CT ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSNQAHCARAVTLLDCTLRDGGYLNGHDFSAPQIDAILTRLLASGVDVIEVGYFRRR CCCCCCCHHHHHHHHHHEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHC NVERHPSTVIARCPPAFLASLARTQAVRYAVMVPPGDAEPADLDELAELPVSVVRFTCTD CCCCCCCEEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHCCHHHEEEEECC QNLPKVLALGERAARLGLVVCANITRVSERSHSQLAALTRALAEAGFDTVYAADSNGALY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PDEVAAIVGEMRRHFTGQIGFHAHDSLHLAFANALAAMRAGASWVDGTIGGVGKGGGNAA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH IEVLLSELAKADSRPIDIAGFSQMPASFPHDFFPVRFKERLDNVFYGRNNLNIDKIKSLE HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHH SRPSH CCCCC >Mature Secondary Structure TLLSNQAHCARAVTLLDCTLRDGGYLNGHDFSAPQIDAILTRLLASGVDVIEVGYFRRR CCCCCCHHHHHHHHHHEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHC NVERHPSTVIARCPPAFLASLARTQAVRYAVMVPPGDAEPADLDELAELPVSVVRFTCTD CCCCCCCEEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHCCHHHEEEEECC QNLPKVLALGERAARLGLVVCANITRVSERSHSQLAALTRALAEAGFDTVYAADSNGALY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PDEVAAIVGEMRRHFTGQIGFHAHDSLHLAFANALAAMRAGASWVDGTIGGVGKGGGNAA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH IEVLLSELAKADSRPIDIAGFSQMPASFPHDFFPVRFKERLDNVFYGRNNLNIDKIKSLE HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHH SRPSH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA