| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023998
Identifier: 238023998
GI number: 238023998
Start: 661990
End: 662610
Strand: Reverse
Name: 238023998
Synonym: bglu_2g05520
Alternate gene names: NA
Gene position: 662610-661990 (Counterclockwise)
Preceding gene: 238024002
Following gene: 238023994
Centisome position: 23.44
GC content: 75.85
Gene sequence:
>621_bases ATGAACAAGTCAATCCCATGGATGGACGATGCGGTCCGGCACGGCGAACTGGCGGCACGCATCGTGCCGGTGCGGCGCCG CGAGGACACCGAACGGGCGATGCTGATCGTCGACGTGGTGGAGGCGTATGCGCGCCTGCGCGGCAGCCTCGTGCGCTTCG TCGCGCTGTTCGCGGACGGCTCGGCCGCGGGCCATGCCGCACTGTCGCCGTGCGCGCTCGACACGCGGCGCCTCGACGTG CTGCTGGCCGCACTCGCGGCCGGCGCCGAGCGCGCGCGCTTTCACCGCCTGCCGGATCTGCGCCGGCTGATCGAGCGCGT CGCGCACGCGGAAACGCTTCGCGAGATGATCTTCGCGCCGCCCCCGGCGGCCGGCCCGGCCGCGCTGCGCGAAGCGGCGC GGTCGCTGGAGCGGCTCGACGCCGAGCTGATCGGGATCTGCGTCGAGCACGTGCTGGAGCGCCGCGCGCTAGCCGCGCCC GCCGCCGCATGTCCAACGGCGGCGGCCGAGCATGGCGCCCGCGTCGAACCGCCCCGCCGGCCCGTGCGGCGCAGCCCGGC CCGCACCGCGGACCTCGATCCGGACCGCGAGATTCGCGTCGCCGCCGGACCGCCGCGCTGA
Upstream 100 bases:
>100_bases TTGCGGCATTCATCGAGATTCGTTCGGCAACCCGACTCACAGGATGGCGAGGCCGACGCGGCGGCCCCGGGCCATCGCGC CGGCGCGGGCCAACAGGCGT
Downstream 100 bases:
>100_bases ACCCGCCATGACGCCCGCCGCCCCGCTTTCCCCCTCGGACGAACCGGCCCGGCGGCGGCGCGCGCGGGATCGAACTGGAG TGAGAGTGCGGGCCGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNKSIPWMDDAVRHGELAARIVPVRRREDTERAMLIVDVVEAYARLRGSLVRFVALFADGSAAGHAALSPCALDTRRLDV LLAALAAGAERARFHRLPDLRRLIERVAHAETLREMIFAPPPAAGPAALREAARSLERLDAELIGICVEHVLERRALAAP AAACPTAAAEHGARVEPPRRPVRRSPARTADLDPDREIRVAAGPPR
Sequences:
>Translated_206_residues MNKSIPWMDDAVRHGELAARIVPVRRREDTERAMLIVDVVEAYARLRGSLVRFVALFADGSAAGHAALSPCALDTRRLDV LLAALAAGAERARFHRLPDLRRLIERVAHAETLREMIFAPPPAAGPAALREAARSLERLDAELIGICVEHVLERRALAAP AAACPTAAAEHGARVEPPRRPVRRSPARTADLDPDREIRVAAGPPR >Mature_206_residues MNKSIPWMDDAVRHGELAARIVPVRRREDTERAMLIVDVVEAYARLRGSLVRFVALFADGSAAGHAALSPCALDTRRLDV LLAALAAGAERARFHRLPDLRRLIERVAHAETLREMIFAPPPAAGPAALREAARSLERLDAELIGICVEHVLERRALAAP AAACPTAAAEHGARVEPPRRPVRRSPARTADLDPDREIRVAAGPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22431; Mature: 22431
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSIPWMDDAVRHGELAARIVPVRRREDTERAMLIVDVVEAYARLRGSLVRFVALFADG CCCCCCCHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SAAGHAALSPCALDTRRLDVLLAALAAGAERARFHRLPDLRRLIERVAHAETLREMIFAP CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PPAAGPAALREAARSLERLDAELIGICVEHVLERRALAAPAAACPTAAAEHGARVEPPRR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCCCCCCC PVRRSPARTADLDPDREIRVAAGPPR CHHCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure MNKSIPWMDDAVRHGELAARIVPVRRREDTERAMLIVDVVEAYARLRGSLVRFVALFADG CCCCCCCHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SAAGHAALSPCALDTRRLDVLLAALAAGAERARFHRLPDLRRLIERVAHAETLREMIFAP CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC PPAAGPAALREAARSLERLDAELIGICVEHVLERRALAAPAAACPTAAAEHGARVEPPRR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCCCCCCC PVRRSPARTADLDPDREIRVAAGPPR CHHCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA