Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023994

Identifier: 238023994

GI number: 238023994

Start: 659257

End: 660132

Strand: Reverse

Name: 238023994

Synonym: bglu_2g05480

Alternate gene names: NA

Gene position: 660132-659257 (Counterclockwise)

Preceding gene: 238023998

Following gene: 238023993

Centisome position: 23.35

GC content: 68.15

Gene sequence:

>876_bases
ATGCTGCGCAAGCTGCTGGTCACTGCCGCGGTGGTCGCGAGCGCCCTCGGCGCCCGCGCGCAGGCCGCCGACACCAATAC
CGTGAACGTGCTGTACGCAGGCTCGCTCGTCAACCTGATGGAGCGCAGCGTCGGCCCGGCGTTCGAGAAGGAGACCGGCC
TGCAGTTCCGCGGCTATGCGGCCGGTTCGAACAAGCTGGCCAACGAGATCAAGGGCAAGCTGCGCCGCGGCGACGTGTTC
GTCAGCGCGAGCCCGAAGGTCAACGCCGGCCTGATGGGCGAGGCGAACGGCAACTTCGTGACATGGTATGTCAACTTCGC
CGAATCGCCGCTGATGATCGGCTACAACCCGCAGAGCCGCTTCGCGACGGCGTTCAAGACGAAGCGCTGGGACCAGGTGC
TGCAGGAGCCGGGCATCCGGATCGGCCGCACCGATCCGAAGCTCGATCCGAAGGGCGCGTTCACGGTGGAAATGATGACC
CGGGCGGCGAGCTTCTATCACGAGCCCGATCTGGTCCAGAAGACGCTCGGCGCGCCCGGCAACCCGGATCAGGTGCTGCC
GGAGGAAGCGCTGGTGGGCCGCCTGCAGTCGGGCCAGCTCGACGCCGGCTTCTTCTACTCGACCGAGACCTCGGACCTGA
AGATCCCGGCCGTGGCGCCCGCGCCGGAGTTGCAGGCCAAGGCGAGCTACACGCTGACGATCCTCTCGGACGCGCCGAAC
CGGGACGGCGCGGCGCGCTTCGCGAACTTCCTGCTCAGCGCGAAGGGGCGTGCGCTGCTGAAGGAACACGGCGTGGACGT
GGTCAGGCCGAAGGTGTCCGGCAATGCGCAGGCGCTGCCGCCGTCGCTGCAGGCCGTCATTGACGCCGCGCAGTAA

Upstream 100 bases:

>100_bases
AGTGTAAACATGACGCATGATCGATGCGAGCGCATGCGATCTCCCGAATTGCGCCGGACCACCGTAATATACCGACCTTT
ACAACGCTACGGAGAACACC

Downstream 100 bases:

>100_bases
ATGACGCGACGCGTCGCCGGACCGCTGCGGCTGCTCGCGCTGCTGTTGGCCGCGTACCTGTGCGCGCCGTTCATCGCGAG
CCTGCCGCAGATCGGGCGGG

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MLRKLLVTAAVVASALGARAQAADTNTVNVLYAGSLVNLMERSVGPAFEKETGLQFRGYAAGSNKLANEIKGKLRRGDVF
VSASPKVNAGLMGEANGNFVTWYVNFAESPLMIGYNPQSRFATAFKTKRWDQVLQEPGIRIGRTDPKLDPKGAFTVEMMT
RAASFYHEPDLVQKTLGAPGNPDQVLPEEALVGRLQSGQLDAGFFYSTETSDLKIPAVAPAPELQAKASYTLTILSDAPN
RDGAARFANFLLSAKGRALLKEHGVDVVRPKVSGNAQALPPSLQAVIDAAQ

Sequences:

>Translated_291_residues
MLRKLLVTAAVVASALGARAQAADTNTVNVLYAGSLVNLMERSVGPAFEKETGLQFRGYAAGSNKLANEIKGKLRRGDVF
VSASPKVNAGLMGEANGNFVTWYVNFAESPLMIGYNPQSRFATAFKTKRWDQVLQEPGIRIGRTDPKLDPKGAFTVEMMT
RAASFYHEPDLVQKTLGAPGNPDQVLPEEALVGRLQSGQLDAGFFYSTETSDLKIPAVAPAPELQAKASYTLTILSDAPN
RDGAARFANFLLSAKGRALLKEHGVDVVRPKVSGNAQALPPSLQAVIDAAQ
>Mature_291_residues
MLRKLLVTAAVVASALGARAQAADTNTVNVLYAGSLVNLMERSVGPAFEKETGLQFRGYAAGSNKLANEIKGKLRRGDVF
VSASPKVNAGLMGEANGNFVTWYVNFAESPLMIGYNPQSRFATAFKTKRWDQVLQEPGIRIGRTDPKLDPKGAFTVEMMT
RAASFYHEPDLVQKTLGAPGNPDQVLPEEALVGRLQSGQLDAGFFYSTETSDLKIPAVAPAPELQAKASYTLTILSDAPN
RDGAARFANFLLSAKGRALLKEHGVDVVRPKVSGNAQALPPSLQAVIDAAQ

Specific function: Unknown

COG id: COG0725

COG function: function code P; ABC-type molybdate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family. WtpA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022498
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 31120; Mature: 31120

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKLLVTAAVVASALGARAQAADTNTVNVLYAGSLVNLMERSVGPAFEKETGLQFRGYA
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHCCCCEEEEEE
AGSNKLANEIKGKLRRGDVFVSASPKVNAGLMGEANGNFVTWYVNFAESPLMIGYNPQSR
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCHHH
FATAFKTKRWDQVLQEPGIRIGRTDPKLDPKGAFTVEMMTRAASFYHEPDLVQKTLGAPG
HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCC
NPDQVLPEEALVGRLQSGQLDAGFFYSTETSDLKIPAVAPAPELQAKASYTLTILSDAPN
CCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCC
RDGAARFANFLLSAKGRALLKEHGVDVVRPKVSGNAQALPPSLQAVIDAAQ
CCHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLRKLLVTAAVVASALGARAQAADTNTVNVLYAGSLVNLMERSVGPAFEKETGLQFRGYA
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHCCCCEEEEEE
AGSNKLANEIKGKLRRGDVFVSASPKVNAGLMGEANGNFVTWYVNFAESPLMIGYNPQSR
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCHHH
FATAFKTKRWDQVLQEPGIRIGRTDPKLDPKGAFTVEMMTRAASFYHEPDLVQKTLGAPG
HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCC
NPDQVLPEEALVGRLQSGQLDAGFFYSTETSDLKIPAVAPAPELQAKASYTLTILSDAPN
CCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCC
RDGAARFANFLLSAKGRALLKEHGVDVVRPKVSGNAQALPPSLQAVIDAAQ
CCHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA