| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023976
Identifier: 238023976
GI number: 238023976
Start: 633474
End: 634223
Strand: Reverse
Name: 238023976
Synonym: bglu_2g05260
Alternate gene names: NA
Gene position: 634223-633474 (Counterclockwise)
Preceding gene: 238023977
Following gene: 238023974
Centisome position: 22.43
GC content: 72.0
Gene sequence:
>750_bases ATGAGTCACCGGCCCCCCGTCATCCTCATCCAGGGCTTCATCGGCAGCCTCGATGCGATCGCCTCCGGCCACCCCGACCT CCTCCGGGCCGCGCCGGACCTGCTCGGCTACGGCGCCTATCGGCATGTCCCGTTCGAGGCCATCTCGCTGCCCGAGCAGG TCGAGCACATTCGCGCCTTCATCGCCGCGCGCACCGATGCGCCCACCGTGGACCTGGTCGGCCATTCGACCGGCGGCGCG ATCGCGATGCTGTTCGCGCATGCCTACCCCGACCGCGTGCGCCGGATCGTCAATGTCGAAGGCAACTTCACGCTCGACGA CGCGTTCTGGTCGGCGCCGATGGCGCACCTGACGCCGGCCGAGGCGGACGCGCGGCTCGCGTCGCTGCGCGCCCAACCGG CTGCCTGGCTGCGCTGCGTGGTCCGCGACGTGACGCCGGCGATGGCCGACACGGCCGCGCGCTGGCTCGACCGTCAGCCG GCCTCGACGCTGCGCGCGATGGGGCAGTCGGTGATCGCGGTGACCGGCAACGCCGGCTATGCCGGCAAGCTCAGGCAGGT GTTCCAGCGCCATCCGGTGTACCTGCTATCGGGCGAGCGCTCGCACGACAACTGGCACCTGCCGGGCTGGGCCGTCGAGC TGTGCGCGGGCCGCGAAGTGCTCGCGGACTGCGGGCACCTGATGATGCTCGAGGCTCCCGCCGCCTTCTCGGCCGCGATC GAGGGCTTCCTGAGCCGGCCCGAGGCCTGA
Upstream 100 bases:
>100_bases GTGCCAAGCGAGCGCGGCCCGCGCTCGCCGAACCGGCCGCCGAAACCGGCGCCGGGCTCGCCGCGTCCCTGCCTCTCCAT TCACCCGCGAGACGATCCGC
Downstream 100 bases:
>100_bases GGCGCCGCGGCCGGGCGCGCCCGCAAGCCGAACGGGTCGGGAGGCCCCCCGTCGAATCGGGTGGGCGGAGCGGAAATCAC CGCGCCGCTTGCCGATCGCG
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSHRPPVILIQGFIGSLDAIASGHPDLLRAAPDLLGYGAYRHVPFEAISLPEQVEHIRAFIAARTDAPTVDLVGHSTGGA IAMLFAHAYPDRVRRIVNVEGNFTLDDAFWSAPMAHLTPAEADARLASLRAQPAAWLRCVVRDVTPAMADTAARWLDRQP ASTLRAMGQSVIAVTGNAGYAGKLRQVFQRHPVYLLSGERSHDNWHLPGWAVELCAGREVLADCGHLMMLEAPAAFSAAI EGFLSRPEA
Sequences:
>Translated_249_residues MSHRPPVILIQGFIGSLDAIASGHPDLLRAAPDLLGYGAYRHVPFEAISLPEQVEHIRAFIAARTDAPTVDLVGHSTGGA IAMLFAHAYPDRVRRIVNVEGNFTLDDAFWSAPMAHLTPAEADARLASLRAQPAAWLRCVVRDVTPAMADTAARWLDRQP ASTLRAMGQSVIAVTGNAGYAGKLRQVFQRHPVYLLSGERSHDNWHLPGWAVELCAGREVLADCGHLMMLEAPAAFSAAI EGFLSRPEA >Mature_248_residues SHRPPVILIQGFIGSLDAIASGHPDLLRAAPDLLGYGAYRHVPFEAISLPEQVEHIRAFIAARTDAPTVDLVGHSTGGAI AMLFAHAYPDRVRRIVNVEGNFTLDDAFWSAPMAHLTPAEADARLASLRAQPAAWLRCVVRDVTPAMADTAARWLDRQPA STLRAMGQSVIAVTGNAGYAGKLRQVFQRHPVYLLSGERSHDNWHLPGWAVELCAGREVLADCGHLMMLEAPAAFSAAIE GFLSRPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.-
Molecular weight: Translated: 26927; Mature: 26796
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRPPVILIQGFIGSLDAIASGHPDLLRAAPDLLGYGAYRHVPFEAISLPEQVEHIRAF CCCCCCEEEEECHHCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHH IAARTDAPTVDLVGHSTGGAIAMLFAHAYPDRVRRIVNVEGNFTLDDAFWSAPMAHLTPA HHHCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHCCCCCCEEECHHHHCCCHHHCCCC EADARLASLRAQPAAWLRCVVRDVTPAMADTAARWLDRQPASTLRAMGQSVIAVTGNAGY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCC AGKLRQVFQRHPVYLLSGERSHDNWHLPGWAVELCAGREVLADCGHLMMLEAPAAFSAAI HHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHH EGFLSRPEA HHHHCCCCC >Mature Secondary Structure SHRPPVILIQGFIGSLDAIASGHPDLLRAAPDLLGYGAYRHVPFEAISLPEQVEHIRAF CCCCCEEEEECHHCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHH IAARTDAPTVDLVGHSTGGAIAMLFAHAYPDRVRRIVNVEGNFTLDDAFWSAPMAHLTPA HHHCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHCCCCCCEEECHHHHCCCHHHCCCC EADARLASLRAQPAAWLRCVVRDVTPAMADTAARWLDRQPASTLRAMGQSVIAVTGNAGY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCC AGKLRQVFQRHPVYLLSGERSHDNWHLPGWAVELCAGREVLADCGHLMMLEAPAAFSAAI HHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHCCCCEEEEECCHHHHHHH EGFLSRPEA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA