| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023967
Identifier: 238023967
GI number: 238023967
Start: 621829
End: 622236
Strand: Direct
Name: 238023967
Synonym: bglu_2g05170
Alternate gene names: NA
Gene position: 621829-622236 (Clockwise)
Preceding gene: 238023966
Following gene: 238023968
Centisome position: 21.99
GC content: 72.06
Gene sequence:
>408_bases TTGGGGGCGGGCCGCCTCGATACCACCGCCGCGGCGCTGCTGTTCCTGCGGGTGGCCGCGAGCCTGCTGCTGCTGTTCGT GCATGGGCTGCCGAAGGCACTGCATCCGAGCGCGCAGCTGGCCGTGATCGAGGATCCGCTGCATCTGGGCGCGCCGTTGA CGCTCGGGTTCGCGATCTTCGCCGAGGTGCTGTGCCCGCTGCTGATGATGGCCGGCATCGCCGCGCGGCTCGCGGCCCTG CCGATCCTGGTGATCACGGTGGTCGCGCTGACGCTGGTCCATCCCGACTGGTCGCTCGGGCAGGGGCAGTTCGCCTGGAT GCTGCTGATCCTGTTCGGCACGGTGGCGATCGGCGGGCCGGGGCGCTACCGCATCGCGCTGCCGTGGGGCAGGCGCCGGG TGCGCTGA
Upstream 100 bases:
>100_bases GTTCTGGGGCGCGCTCGGTTGCAGCTGCTTCGCGTTCTGACGGGGCGCCGCGATGAAGTCCGACGCGCCGCGTGGCGCCC ACGCTTCGCCCGCTGTCGCC
Downstream 100 bases:
>100_bases CGCCCGCGGCGTGCGGCAAGGTCCCGCGCGCCGCAGGCGTGGCGCACACCACACGGACATCGCGGGGGAAGGGCATGCGA GCAGCGGGGTCGAGCGTGGG
Product: DoxX family protein
Products: NA
Alternate protein names: Transmembrane Protein; DoxX Protein
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGAGRLDTTAAALLFLRVAASLLLLFVHGLPKALHPSAQLAVIEDPLHLGAPLTLGFAIFAEVLCPLLMMAGIAARLAAL PILVITVVALTLVHPDWSLGQGQFAWMLLILFGTVAIGGPGRYRIALPWGRRRVR
Sequences:
>Translated_135_residues MGAGRLDTTAAALLFLRVAASLLLLFVHGLPKALHPSAQLAVIEDPLHLGAPLTLGFAIFAEVLCPLLMMAGIAARLAAL PILVITVVALTLVHPDWSLGQGQFAWMLLILFGTVAIGGPGRYRIALPWGRRRVR >Mature_134_residues GAGRLDTTAAALLFLRVAASLLLLFVHGLPKALHPSAQLAVIEDPLHLGAPLTLGFAIFAEVLCPLLMMAGIAARLAALP ILVITVVALTLVHPDWSLGQGQFAWMLLILFGTVAIGGPGRYRIALPWGRRRVR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14363; Mature: 14231
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGRLDTTAAALLFLRVAASLLLLFVHGLPKALHPSAQLAVIEDPLHLGAPLTLGFAIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCHHHCCHHHHHHHHH AEVLCPLLMMAGIAARLAALPILVITVVALTLVHPDWSLGQGQFAWMLLILFGTVAIGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC GRYRIALPWGRRRVR CCEEEECCCCCCCCC >Mature Secondary Structure GAGRLDTTAAALLFLRVAASLLLLFVHGLPKALHPSAQLAVIEDPLHLGAPLTLGFAIF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCHHHCCHHHHHHHHH AEVLCPLLMMAGIAARLAALPILVITVVALTLVHPDWSLGQGQFAWMLLILFGTVAIGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC GRYRIALPWGRRRVR CCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA