| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023955
Identifier: 238023955
GI number: 238023955
Start: 604575
End: 605150
Strand: Reverse
Name: 238023955
Synonym: bglu_2g05050
Alternate gene names: NA
Gene position: 605150-604575 (Counterclockwise)
Preceding gene: 238023956
Following gene: 238023954
Centisome position: 21.4
GC content: 66.32
Gene sequence:
>576_bases ATGACCCACAGCACGAAACTGACCGATGTCCAGACCCTGCGCGAGCGCGCCCGCAAGCATGTCGATGACGGCGCCGTGAC GGCCGGCTATGGCGCCGACCGCGACACCGTCCTGCGGCTGCTCAACGAGGCGCTCGCCACCGAAATCGTCTGCATGCTGC GCTACCGGCGCCATCACTACATGGCCAAGGGCATACAGTCGTCGGCGATCGCCGACGAGTTCCTCGCGCACTCGAACGAG GAGCAGAGCCACGCCGACATGATCGCCGCGCGCATCGTGCAGCTCGGCGGCAGCCCCGATCTCGCGCCGGACGGGCTCAC CGCGCGCAGCCACGCGGAATACGTGGAGGGCTCGTCGCTGGTCGACATGATCGTCGAGAACCTGGTGGCCGAGCGGATCG CGATCGACAGCTATCGCGACGCGATCCAGTACCTCGGCGACAAGGATCCGACCACGCGCCGCCTGTTCGAAACCATCCTG GCGGTGGAAGAGGAACACGCCGACGACATGTCCGACCTGATGCAGGGCCTGCCGCCCGAGCTCAAGAAGCAAGGCGCGAA CGGCAAGATGAACTGA
Upstream 100 bases:
>100_bases GGCGCCGCCCGCACGCCGCGCGCGGCGGCACACGATGCCGCCGCGGCCGCGCCGGCCGCCGGCCCGATTCTTCTTCGACG AACGAATAAAGAGGATTGCG
Downstream 100 bases:
>100_bases GCACCGCGCGCGCAGCATCACGGCGCGCGGCGCGCACCGCACTGCATCGTCAGGCGGCACCGGCCGGCATGGCGTGTGCC GCGAGGCGAGGCGTTCCCGT
Product: bacterioferritin (cytochrome b1)
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Bacterioferritin-Like Domain-Containing Protein; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTHSTKLTDVQTLRERARKHVDDGAVTAGYGADRDTVLRLLNEALATEIVCMLRYRRHHYMAKGIQSSAIADEFLAHSNE EQSHADMIAARIVQLGGSPDLAPDGLTARSHAEYVEGSSLVDMIVENLVAERIAIDSYRDAIQYLGDKDPTTRRLFETIL AVEEEHADDMSDLMQGLPPELKKQGANGKMN
Sequences:
>Translated_191_residues MTHSTKLTDVQTLRERARKHVDDGAVTAGYGADRDTVLRLLNEALATEIVCMLRYRRHHYMAKGIQSSAIADEFLAHSNE EQSHADMIAARIVQLGGSPDLAPDGLTARSHAEYVEGSSLVDMIVENLVAERIAIDSYRDAIQYLGDKDPTTRRLFETIL AVEEEHADDMSDLMQGLPPELKKQGANGKMN >Mature_190_residues THSTKLTDVQTLRERARKHVDDGAVTAGYGADRDTVLRLLNEALATEIVCMLRYRRHHYMAKGIQSSAIADEFLAHSNEE QSHADMIAARIVQLGGSPDLAPDGLTARSHAEYVEGSSLVDMIVENLVAERIAIDSYRDAIQYLGDKDPTTRRLFETILA VEEEHADDMSDLMQGLPPELKKQGANGKMN
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21162; Mature: 21031
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSTKLTDVQTLRERARKHVDDGAVTAGYGADRDTVLRLLNEALATEIVCMLRYRRHHY CCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKGIQSSAIADEFLAHSNEEQSHADMIAARIVQLGGSPDLAPDGLTARSHAEYVEGSSL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHH VDMIVENLVAERIAIDSYRDAIQYLGDKDPTTRRLFETILAVEEEHADDMSDLMQGLPPE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHH LKKQGANGKMN HHHCCCCCCCC >Mature Secondary Structure THSTKLTDVQTLRERARKHVDDGAVTAGYGADRDTVLRLLNEALATEIVCMLRYRRHHY CCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MAKGIQSSAIADEFLAHSNEEQSHADMIAARIVQLGGSPDLAPDGLTARSHAEYVEGSSL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHH VDMIVENLVAERIAIDSYRDAIQYLGDKDPTTRRLFETILAVEEEHADDMSDLMQGLPPE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHH LKKQGANGKMN HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA