Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is soxG [H]

Identifier: 238023952

GI number: 238023952

Start: 602739

End: 603374

Strand: Direct

Name: soxG [H]

Synonym: bglu_2g05020

Alternate gene names: 238023952

Gene position: 602739-603374 (Clockwise)

Preceding gene: 238023951

Following gene: 238023953

Centisome position: 21.32

GC content: 69.97

Gene sequence:

>636_bases
ATGTGGAATGAAACGAGAAATCAGCCTTCGGTGGCCGTGCAGGGCGCGGGACTGCGGCTCGAATCGCCGCTGGTGGGCGC
GCAGGACGTGCTGAAGCCGCATCAGGGCCGCGCCTCGCAGAAGTTTCAGCTGCGCGAGCGGCCGTTCCTCGATCTCGTCA
ACGTGCGCGGCGAGGCGGCCGATCCGGCCTTCGTCGCCGCGTTCGAGCAGGTGGTCGGCTGCCGGCCGCCCGTTAAGCCG
AACACGGTGGCGCGCGGCGCCGAATACGACGTGCTGTGGCTCGGCCCCGACGAGTGGCTGGTGCGCTCGCATGGCCCGGT
GGCGGCCGGGCAGCTCGAAGGCCGGCTCGTGCCGGCGCTGGCCGGGCTCTATGCGGCGGCGGTGGATGTCGGCAGCGGCT
ACACCGTGCTCGAGATCAGCGGCGAGCGGGTGCGCGACGTGATCGCGCGCGGCTGCCCGCTCGACCTGCATCCACGCGGC
TTCGGCGTGGGCCAATGCGCGCAGAGCCATTACTTCAAGGCTTCGCTGACGCTGGTGCCCACCGGCGAGCAATGCTACGA
ACTGGTGATCCGCCGCAGCTTCGCCGACTATTTCGTGCGCATCATGCTCGACGCCGCGGCGCCGCTCCAGTCATGA

Upstream 100 bases:

>100_bases
AAGATGGGGCAGCCGGTGGCGATCTCGCTCGCGAACGGCAAGCGCGTGGTCGCGAAGATCACGAGCCCGGTTTTCTACGA
CACCGAAGGGGTACGTCAGA

Downstream 100 bases:

>100_bases
AGCCCGTCGATGGTCCGTTCGCGCCGCTCGAGCCGCCGCGCGGGCGCGGCTGGAGCGTGTTCATCGACGCGCTGCAGGTG
CCGGCGCGCATCGGCATCCA

Product: sarcosine oxidase subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAADPAFVAAFEQVVGCRPPVKP
NTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPALAGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRG
FGVGQCAQSHYFKASLTLVPTGEQCYELVIRRSFADYFVRIMLDAAAPLQS

Sequences:

>Translated_211_residues
MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAADPAFVAAFEQVVGCRPPVKP
NTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPALAGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRG
FGVGQCAQSHYFKASLTLVPTGEQCYELVIRRSFADYFVRIMLDAAAPLQS
>Mature_211_residues
MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAADPAFVAAFEQVVGCRPPVKP
NTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPALAGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRG
FGVGQCAQSHYFKASLTLVPTGEQCYELVIRRSFADYFVRIMLDAAAPLQS

Specific function: Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate [H]

COG id: COG4583

COG function: function code E; Sarcosine oxidase gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007375
- InterPro:   IPR006280 [H]

Pfam domain/function: PF04268 SoxG [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 22891; Mature: 22891

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAA
CCCCCCCCCCEEEECCCEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCCEEHHCCCCCC
DPAFVAAFEQVVGCRPPVKPNTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPAL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHEEECCCCEECCCCCCCHHHHH
AGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRGFGVGQCAQSHYFKASLTLVP
HHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEE
TGEQCYELVIRRSFADYFVRIMLDAAAPLQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWNETRNQPSVAVQGAGLRLESPLVGAQDVLKPHQGRASQKFQLRERPFLDLVNVRGEAA
CCCCCCCCCCEEEECCCEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCCEEHHCCCCCC
DPAFVAAFEQVVGCRPPVKPNTVARGAEYDVLWLGPDEWLVRSHGPVAAGQLEGRLVPAL
CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHEEECCCCEECCCCCCCHHHHH
AGLYAAAVDVGSGYTVLEISGERVRDVIARGCPLDLHPRGFGVGQCAQSHYFKASLTLVP
HHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEEEEEEEEE
TGEQCYELVIRRSFADYFVRIMLDAAAPLQS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7543100 [H]