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The map label for this gene is soxB [H]

Identifier: 238023949

GI number: 238023949

Start: 598171

End: 599415

Strand: Direct

Name: soxB [H]

Synonym: bglu_2g04990

Alternate gene names: 238023949

Gene position: 598171-599415 (Clockwise)

Preceding gene: 339717968

Following gene: 238023950

Centisome position: 21.16

GC content: 67.39

Gene sequence:

>1245_bases
ATGAGCCGCTACTCGATATTCAGCCTGTTCCGCAACGGCCTGTCGTACCACGAGAACTGGGAACGACAGTGGAAGAGCCC
CGAGCCGAAGAAGGAGTACGACGTCGTGATCGTCGGCGGCGGCGGGCACGGGCTGGCCACCGCCTACTACCTCGCCAAGG
AGCACGGCATCACCAACGTGGCGATCCTCGAGAAGGGCTGGATCGGCGGCGGCAACACCGCGCGCAACACCACCATCGTG
CGCTCGAACTACCTGTGGGACGAGTCGGCCGGGCTCTACGAGAAGGCGATGAAGCTCTGGGAAGGGCTCTCGCAGGAACT
CAACTACAACGTGATGTTCAGCCAGCGCGGCGTGATGAACCTCGCGCACACGCTGCAGGACGTGCGCGACACGCAGCGCC
GCGTCAACGCCAACCGCCTGAACGGGGTGGATGCCGAATTCCTCACGCCGGCGCAGATCAAGGAGATCGAGCCGACCATC
AACCTCAACAGCCGCTATCCGGTGCTCGGCGCCTCGATCCAGCGGCGCGGCGGCGTGGCGCGCCACGACGCGGTGGCCTG
GGGCTTCGCGCGCGGCGCCGACCGCGCCGGCGTGGACATCATCCAGAACTGCCAGGTGATCGGCATCCGCCGCGACGGCG
GCGCCGTGACCGGCGTGGATACCGTGAAGGGCTTCATCAAGGCGAAGAAGGTGGCGGTGGTGGCGGCCGGCAACACCTCG
ACGCTGGCCGACATGGCCGGCGTGCGGCTGCCGATCGAGAGCCATCCGCTGCAGGCGCTGGTGTCCGAGCCGATCAAGCC
GGTGGTCAACACGGTGGTGATGTCGAACGCGGTGCATGCCTACATCAGCCAGTCCGACAAGGGCGACCTCGTGATCGGCG
CGGGCATCGATCAATACACGGGGTTCGGCCAGCGCGGCAGCTTCCAGATCATCGAGGGCACGCTGGAGGCGATCGTCGAG
ATGTTCCCGGTGTTCTCGCGCGTGCGCATGAACCGCCAGTGGGGCGGCATCGTCGACGTCTCGCCCGACGCCTGCCCGAT
CATCAGCAAGACCGACGTGAAGGGCCTGTACTTCAACTGCGGCTGGGGCACGGGCGGCTTCAAGGCCACTCCGGGCTCGG
GCTGGACCTACGCGCACACCATCGCGCGCGACGAGCCGCATCCGCTGAACGCGCCGTTCGCGCTCGACCGCTTCTACAGC
GGCCACCTGATCGACGAGCACGGCGCCGCCGCCGTCGCCCACTGA

Upstream 100 bases:

>100_bases
ATGCGCGAGACCGGCGCCGACATGAAGACGAAATACAAGGAGACGTCGCGCGGTGGCCTCGCCGTGAACGTCATCGAATG
CTAAACCAAGGTAATCGCAC

Downstream 100 bases:

>100_bases
CCCACGCCACGAGGAACCCCAACATGCTGCTGATCGAATGCCCGTGGTGCGGGCCGCGCGCCGAATCCGAATTTTCCTGC
GGCGGGGAAGCCGACATCAT

Product: sarcosine oxidase subunit beta

Products: NA

Alternate protein names: Sarcosine oxidase subunit B [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSRYSIFSLFRNGLSYHENWERQWKSPEPKKEYDVVIVGGGGHGLATAYYLAKEHGITNVAILEKGWIGGGNTARNTTIV
RSNYLWDESAGLYEKAMKLWEGLSQELNYNVMFSQRGVMNLAHTLQDVRDTQRRVNANRLNGVDAEFLTPAQIKEIEPTI
NLNSRYPVLGASIQRRGGVARHDAVAWGFARGADRAGVDIIQNCQVIGIRRDGGAVTGVDTVKGFIKAKKVAVVAAGNTS
TLADMAGVRLPIESHPLQALVSEPIKPVVNTVVMSNAVHAYISQSDKGDLVIGAGIDQYTGFGQRGSFQIIEGTLEAIVE
MFPVFSRVRMNRQWGGIVDVSPDACPIISKTDVKGLYFNCGWGTGGFKATPGSGWTYAHTIARDEPHPLNAPFALDRFYS
GHLIDEHGAAAVAH

Sequences:

>Translated_414_residues
MSRYSIFSLFRNGLSYHENWERQWKSPEPKKEYDVVIVGGGGHGLATAYYLAKEHGITNVAILEKGWIGGGNTARNTTIV
RSNYLWDESAGLYEKAMKLWEGLSQELNYNVMFSQRGVMNLAHTLQDVRDTQRRVNANRLNGVDAEFLTPAQIKEIEPTI
NLNSRYPVLGASIQRRGGVARHDAVAWGFARGADRAGVDIIQNCQVIGIRRDGGAVTGVDTVKGFIKAKKVAVVAAGNTS
TLADMAGVRLPIESHPLQALVSEPIKPVVNTVVMSNAVHAYISQSDKGDLVIGAGIDQYTGFGQRGSFQIIEGTLEAIVE
MFPVFSRVRMNRQWGGIVDVSPDACPIISKTDVKGLYFNCGWGTGGFKATPGSGWTYAHTIARDEPHPLNAPFALDRFYS
GHLIDEHGAAAVAH
>Mature_413_residues
SRYSIFSLFRNGLSYHENWERQWKSPEPKKEYDVVIVGGGGHGLATAYYLAKEHGITNVAILEKGWIGGGNTARNTTIVR
SNYLWDESAGLYEKAMKLWEGLSQELNYNVMFSQRGVMNLAHTLQDVRDTQRRVNANRLNGVDAEFLTPAQIKEIEPTIN
LNSRYPVLGASIQRRGGVARHDAVAWGFARGADRAGVDIIQNCQVIGIRRDGGAVTGVDTVKGFIKAKKVAVVAAGNTST
LADMAGVRLPIESHPLQALVSEPIKPVVNTVVMSNAVHAYISQSDKGDLVIGAGIDQYTGFGQRGSFQIIEGTLEAIVEM
FPVFSRVRMNRQWGGIVDVSPDACPIISKTDVKGLYFNCGWGTGGFKATPGSGWTYAHTIARDEPHPLNAPFALDRFYSG
HLIDEHGAAAVAH

Specific function: Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10- methylenetetrahydrofolate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the soxB family [H]

Homologues:

Organism=Homo sapiens, GI197927446, Length=393, Percent_Identity=24.1730279898219, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI21361378, Length=393, Percent_Identity=24.1730279898219, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI24797151, Length=397, Percent_Identity=23.4256926952141, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI194306651, Length=384, Percent_Identity=23.9583333333333, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20130091, Length=383, Percent_Identity=23.2375979112272, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR006278 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 45157; Mature: 45025

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYSIFSLFRNGLSYHENWERQWKSPEPKKEYDVVIVGGGGHGLATAYYLAKEHGITNV
CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEE
AILEKGWIGGGNTARNTTIVRSNYLWDESAGLYEKAMKLWEGLSQELNYNVMFSQRGVMN
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHH
LAHTLQDVRDTQRRVNANRLNGVDAEFLTPAQIKEIEPTINLNSRYPVLGASIQRRGGVA
HHHHHHHHHHHHHHCCHHHCCCCCCHHCCCHHHHHCCCCEECCCCCCCCCCCHHHCCCCC
RHDAVAWGFARGADRAGVDIIQNCQVIGIRRDGGAVTGVDTVKGFIKAKKVAVVAAGNTS
HHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCEECHHHHHHHHHEEEEEEEECCCCH
TLADMAGVRLPIESHPLQALVSEPIKPVVNTVVMSNAVHAYISQSDKGDLVIGAGIDQYT
HHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCHHHC
GFGQRGSFQIIEGTLEAIVEMFPVFSRVRMNRQWGGIVDVSPDACPIISKTDVKGLYFNC
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEEEEC
GWGTGGFKATPGSGWTYAHTIARDEPHPLNAPFALDRFYSGHLIDEHGAAAVAH
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCEECCC
>Mature Secondary Structure 
SRYSIFSLFRNGLSYHENWERQWKSPEPKKEYDVVIVGGGGHGLATAYYLAKEHGITNV
CCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEE
AILEKGWIGGGNTARNTTIVRSNYLWDESAGLYEKAMKLWEGLSQELNYNVMFSQRGVMN
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHH
LAHTLQDVRDTQRRVNANRLNGVDAEFLTPAQIKEIEPTINLNSRYPVLGASIQRRGGVA
HHHHHHHHHHHHHHCCHHHCCCCCCHHCCCHHHHHCCCCEECCCCCCCCCCCHHHCCCCC
RHDAVAWGFARGADRAGVDIIQNCQVIGIRRDGGAVTGVDTVKGFIKAKKVAVVAAGNTS
HHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCEECHHHHHHHHHEEEEEEEECCCCH
TLADMAGVRLPIESHPLQALVSEPIKPVVNTVVMSNAVHAYISQSDKGDLVIGAGIDQYT
HHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCHHHC
GFGQRGSFQIIEGTLEAIVEMFPVFSRVRMNRQWGGIVDVSPDACPIISKTDVKGLYFNC
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEEEEEC
GWGTGGFKATPGSGWTYAHTIARDEPHPLNAPFALDRFYSGHLIDEHGAAAVAH
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7543100; 1939012; 3202887; 7692961 [H]