Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023931

Identifier: 238023931

GI number: 238023931

Start: 576775

End: 577725

Strand: Direct

Name: 238023931

Synonym: bglu_2g04800

Alternate gene names: NA

Gene position: 576775-577725 (Clockwise)

Preceding gene: 238023930

Following gene: 238023933

Centisome position: 20.4

GC content: 66.14

Gene sequence:

>951_bases
ATGAAACGATTCCTGATCGCGGCGGCTTGCGGGCTCGGGCTGGCCGCGGCACCGTGGACGGCCGCGCGGGCGGCCGATCC
GCAGGCCTGCAAGACGGTGCGCTTCGCCGACGTCGGCTGGAGCGATATCGCGGCCACCACCGGGCTCGCCTCGACGGTGC
TGGCCGGGCTCGGCTACACGCCGACCAAGACCATCGCCTCGGTGCCGATCACGTTCGCGGGGATCAAGAGCAAGCAGATC
GACGTGTTCCTCGGCTACTGGTCGCCGACCATGGACCCGATCATCGCGCCCTTCACGAAGGCCGGCACGATCAAGGTGCT
CGCCACGCCGAACCTGACCGGCGCGAAATACACGCTGGCGGTGCCCGACTACGTCTACCAGGGCGGCCTGAAGTCGTTCT
CCGACATTCAGAAGTACGCCGACAAGCTGGACGGCAAGATCTACGGCATCGAACCCGGCAACGACGGCAACGCGCTGATC
CGCAAGATGATCGACGGCAACCAGTACGGGCTCGGCAAGTTCAAGCTGGTGGAATCGAGCGAGGCGGGCATGCTGGTGGA
GGTGAACCGCGCGATCCGCAACAAGCAGTGGATCGTGTTCCTCGGCTGGGAGCCGCACCCGATGAACGTGCAGTTCAAGA
TGGATTACCTAACGGGCGGCGACGCCGTGTTCGGCCCGAACTACGGCGAGGCGCGCGTGCTGACGGCCACGCCGCCCGAT
TACGCGGCGCGCTGCCCGAACGCGGCGAAGTTCGTGTCGAACCTGCAGTTCACCACCGAGATCGAGAACCGCGTGATGGT
GCCGATCATGAGCAAGGAAGATCCGAACAAGGCCGCGAGCGCCTGGCTGAAGGCCAATCCGCAGGTGCTCGACAAGTGGC
TGGCCGGCGTCACGACGTTCGACGGCAAGCCGGGGCTGCCGGCCGTGAGGCGCTATCTGGGCCTGCCTTGA

Upstream 100 bases:

>100_bases
ACGCACGCAGCCGGCCCGGGTAAAGCAGGGCGCTGACGCCGCGCCGCTTCGTACCGAACCCTGTCTCATATCGAACCCAC
AGCTGAGAGGAGAGAAGCAC

Downstream 100 bases:

>100_bases
GCGCGAGGCCTGGCCCGTCTCGCCCGGCGCGCGAGTCAGACCGGAATCGAGCCGCCGCGCAGCCGGATGCCGAGCCGGAT
CAGTTGCACGATGCCGGCCG

Product: glycine betaine/L-proline ABC transporter periplasmic glycine betaine/L-proline-binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYTPTKTIASVPITFAGIKSKQI
DVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLAVPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALI
RKMIDGNQYGLGKFKLVESSEAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD
YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTFDGKPGLPAVRRYLGLP

Sequences:

>Translated_316_residues
MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYTPTKTIASVPITFAGIKSKQI
DVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLAVPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALI
RKMIDGNQYGLGKFKLVESSEAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD
YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTFDGKPGLPAVRRYLGLP
>Mature_316_residues
MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYTPTKTIASVPITFAGIKSKQI
DVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLAVPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALI
RKMIDGNQYGLGKFKLVESSEAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD
YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTFDGKPGLPAVRRYLGLP

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34075; Mature: 34075

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYT
CCCEEEEEHHCCCCCCCCCCHHCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
PTKTIASVPITFAGIKSKQIDVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLA
CCHHHHCCCEEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEE
VPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALIRKMIDGNQYGLGKFKLVESS
CCHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC
EAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD
CCCEEEEEHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCEEECCCCCCEEEEEECCCH
YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTF
HHHHCCCHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCEEEC
DGKPGLPAVRRYLGLP
CCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKRFLIAAACGLGLAAAPWTAARAADPQACKTVRFADVGWSDIAATTGLASTVLAGLGYT
CCCEEEEEHHCCCCCCCCCCHHCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
PTKTIASVPITFAGIKSKQIDVFLGYWSPTMDPIIAPFTKAGTIKVLATPNLTGAKYTLA
CCHHHHCCCEEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCCCEEEEE
VPDYVYQGGLKSFSDIQKYADKLDGKIYGIEPGNDGNALIRKMIDGNQYGLGKFKLVESS
CCHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC
EAGMLVEVNRAIRNKQWIVFLGWEPHPMNVQFKMDYLTGGDAVFGPNYGEARVLTATPPD
CCCEEEEEHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCEEECCCCCCEEEEEECCCH
YAARCPNAAKFVSNLQFTTEIENRVMVPIMSKEDPNKAASAWLKANPQVLDKWLAGVTTF
HHHHCCCHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCEEEC
DGKPGLPAVRRYLGLP
CCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]