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The map label for this gene is rbsC [H]

Identifier: 238023897

GI number: 238023897

Start: 524966

End: 526003

Strand: Reverse

Name: rbsC [H]

Synonym: bglu_2g04360

Alternate gene names: 238023897

Gene position: 526003-524966 (Counterclockwise)

Preceding gene: 238023898

Following gene: 238023896

Centisome position: 18.6

GC content: 69.75

Gene sequence:

>1038_bases
ATGATCAACCCGACCAAGCAGCGGAACCTCGCTTCCGCGACGGCCCATTCGGTGGCCGACCGTACGCCCCCGACGCGCGG
CGCCGACCGCCGCGCGCGCATGCAGTCGCTGATGCGCACCGCCGGCATGCTGCCGGTGCTGCTGGTGCTCTGCCTCGGCT
TCGGCTTGCTGACCGACGGCTTCTTCACGCTGCAGAACCTGTCGATCGTCACGCAGCAGGCCTCGATCAACATCGTGCTG
GCCGCCGGCATGACCTTCGTGATCCTGACGGGCGGCATCGACCTGTCGGTCGGCTCGGTGCTGGCCGCGTCGGCCGTCGC
CGCCCTGCTGGCCTCGACGATTCCAGGCTGGGGCTGGCTGGGCGTGCCGATCGCGCTCGGCGTCGGCCTCGCGTTCGGCG
CGGCCAACGGCGTGCTGATCGCGTTCCTGCGCCTGCCGCCCTTCATCGTCACGCTCGGCGCGATGACCGCGGTGCGCGGC
GTGGCCCGCCTGATCGGCAACGACACGACCGTGTTCAATCCGCAGCTGCCGTTCGCCTTCATCGGCAACGGCACGGTGTT
CGGCCTGCCGTGGCTGGTGGTGATCGCGTGCGCCGTCATTGCGCTGTCGTGGTTCATCCTGCGCCGCACCGTGCTCGGCA
TGCGCATCTACTCGGTGGGCGGCAATCCCGAAGCGGCCCGGCTGTCCGGCATCAACGTGCGGGCCATCAACCTGTTCGTC
TATGCCGCGTCGGGGCTGCTCGCCGGGCTCGGCGCGGTGATGTCGGCCGCCCGGCTCTACGCCGCCAACGGCCTGCAGCT
CGGCCAGTCCTACGAACTCGATGCGATCGCCGCGGTGATTCTCGGCGGCACCAGCTTCGTCGGCGGCGTCGGCTCGATCG
TCGGCACGCTGATCGGCGCACTCATCATCGCGGTGCTGACCAACGGCCTGGTGCTGCTCGGCGTGTCGGACGTCTGGCAG
TACATCATCAAGGGGCTCGTCATCATCGGCGCGGTCGCGCTCGACCGCTACCGCCAACGCGAATCGGCCCGCACCTGA

Upstream 100 bases:

>100_bases
CAGGAAGCGATCATCGCCCTCGCCGCCGGCTCCCAGGCCGAGCCGGCCGAGGCGCATTGATCGCGCCTGCTCCCTCTTCC
CCTTGCCTTCAGATACCGAC

Downstream 100 bases:

>100_bases
GCGGCCGCCACCGCTCCACGCAAGGGTGCGGGCAGGTCCTCCCGCACCCCGCCGCCAACGGACCTTCCGGAGACACAACG
ACATGTTCAAGCAAAACGCC

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MINPTKQRNLASATAHSVADRTPPTRGADRRARMQSLMRTAGMLPVLLVLCLGFGLLTDGFFTLQNLSIVTQQASINIVL
AAGMTFVILTGGIDLSVGSVLAASAVAALLASTIPGWGWLGVPIALGVGLAFGAANGVLIAFLRLPPFIVTLGAMTAVRG
VARLIGNDTTVFNPQLPFAFIGNGTVFGLPWLVVIACAVIALSWFILRRTVLGMRIYSVGGNPEAARLSGINVRAINLFV
YAASGLLAGLGAVMSAARLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDVWQ
YIIKGLVIIGAVALDRYRQRESART

Sequences:

>Translated_345_residues
MINPTKQRNLASATAHSVADRTPPTRGADRRARMQSLMRTAGMLPVLLVLCLGFGLLTDGFFTLQNLSIVTQQASINIVL
AAGMTFVILTGGIDLSVGSVLAASAVAALLASTIPGWGWLGVPIALGVGLAFGAANGVLIAFLRLPPFIVTLGAMTAVRG
VARLIGNDTTVFNPQLPFAFIGNGTVFGLPWLVVIACAVIALSWFILRRTVLGMRIYSVGGNPEAARLSGINVRAINLFV
YAASGLLAGLGAVMSAARLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDVWQ
YIIKGLVIIGAVALDRYRQRESART
>Mature_345_residues
MINPTKQRNLASATAHSVADRTPPTRGADRRARMQSLMRTAGMLPVLLVLCLGFGLLTDGFFTLQNLSIVTQQASINIVL
AAGMTFVILTGGIDLSVGSVLAASAVAALLASTIPGWGWLGVPIALGVGLAFGAANGVLIAFLRLPPFIVTLGAMTAVRG
VARLIGNDTTVFNPQLPFAFIGNGTVFGLPWLVVIACAVIALSWFILRRTVLGMRIYSVGGNPEAARLSGINVRAINLFV
YAASGLLAGLGAVMSAARLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGALIIAVLTNGLVLLGVSDVWQ
YIIKGLVIIGAVALDRYRQRESART

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4158

COG function: function code R; Predicted ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=315, Percent_Identity=45.7142857142857, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI1790524, Length=300, Percent_Identity=38.3333333333333, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1788896, Length=330, Percent_Identity=35.1515151515151, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI145693152, Length=302, Percent_Identity=34.4370860927152, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI145693214, Length=265, Percent_Identity=40.7547169811321, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI87082395, Length=296, Percent_Identity=36.1486486486487, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1788471, Length=340, Percent_Identity=37.0588235294118, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789992, Length=138, Percent_Identity=47.1014492753623, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787793, Length=289, Percent_Identity=31.8339100346021, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787794, Length=313, Percent_Identity=30.3514376996805, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35698; Mature: 35698

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPTKQRNLASATAHSVADRTPPTRGADRRARMQSLMRTAGMLPVLLVLCLGFGLLTDG
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
FFTLQNLSIVTQQASINIVLAAGMTFVILTGGIDLSVGSVLAASAVAALLASTIPGWGWL
HHHHHHHHHEEECCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
GVPIALGVGLAFGAANGVLIAFLRLPPFIVTLGAMTAVRGVARLIGNDTTVFNPQLPFAF
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
IGNGTVFGLPWLVVIACAVIALSWFILRRTVLGMRIYSVGGNPEAARLSGINVRAINLFV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCEEEEEEEHH
YAASGLLAGLGAVMSAARLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LIIAVLTNGLVLLGVSDVWQYIIKGLVIIGAVALDRYRQRESART
HHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINPTKQRNLASATAHSVADRTPPTRGADRRARMQSLMRTAGMLPVLLVLCLGFGLLTDG
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
FFTLQNLSIVTQQASINIVLAAGMTFVILTGGIDLSVGSVLAASAVAALLASTIPGWGWL
HHHHHHHHHEEECCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
GVPIALGVGLAFGAANGVLIAFLRLPPFIVTLGAMTAVRGVARLIGNDTTVFNPQLPFAF
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE
IGNGTVFGLPWLVVIACAVIALSWFILRRTVLGMRIYSVGGNPEAARLSGINVRAINLFV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEECCCEEEEEEEHH
YAASGLLAGLGAVMSAARLYAANGLQLGQSYELDAIAAVILGGTSFVGGVGSIVGTLIGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LIIAVLTNGLVLLGVSDVWQYIIKGLVIIGAVALDRYRQRESART
HHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]