| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023890
Identifier: 238023890
GI number: 238023890
Start: 516977
End: 518947
Strand: Reverse
Name: 238023890
Synonym: bglu_2g04290
Alternate gene names: NA
Gene position: 518947-516977 (Counterclockwise)
Preceding gene: 238023891
Following gene: 238023884
Centisome position: 18.35
GC content: 70.83
Gene sequence:
>1971_bases GTGTTCGCGTCCGTGCCTCGTTTCGTCCGTCTTCACGCCATCGCGTCCGCCGTCACGATGTCGTTCCTGCTGACCGCCTG CGGCGGCGGCGACGACACCAGCAATAGCTCGCCCGCGGTGGTCTCGCAGGTGCCCGCGCCGCCCGCCGATCCCGGCTATA CCGACAGCGCGCCGGTGCCCTCGGTTGCGGCCTTCGTCGACACGGCCTATACCAACCAGCGCGGCGACGCCCGCTATGCC ACGATGAGCACCAATGCCGGGGTGCGCGTGCTGGCCGGCTTCCGCGGCCTCTGGCAACCGCTCAGCGAGATCGTCGACGC CGGGGTGAACGCGCCGGCGGCAGGCGGCTTCCCGGCGGTGGTCGCCTCGACCTGGACCGGCCTGCCGACCGACGGCACGC CCAACGGCACGGCGCTGAATCCGGCCGTGCTCAGTGCCAACGTGCAGTACGTGGTATCGGCCACCACCGCGCGCTCCGCC GCGCAGGCCGACGCCGCCTACTACGACGACCGCCGGGGCAAGGGCTACAGCGTCACCGACGGCCTGGGCCCCTTGACGGC GGCCTGGCGCAACGCGGCCCAGCAAACCACCTCCATCACCTCGGTCCCGGCGGACGCCACCGTCACGCTCTACAACGACA GCGGCAACAACACCGGGGTGGGCGGCACGGCCAATCCGACCTTCGGCAGCGTGGTGGATTTCGTCAACGCGATGGGCAAC AACGCATCGACGGAGCCGGCCAAGCGCTTCTACAAATACGAACGGCCGTTCCGCTGGAGCAGCAGCGTCGTCGTCGTCCC TGCGCTGGTGCCGGCCGAAAGCGCCACGCCGGCCACCGACGGCGGCTTTCCCAGCGGCCACTCGGCCGAGGCGATGCGCG ATGCCATCGCCATGGCTTATGTCGTGCCGGAGCGCTTCCAGGAAATGCTGGCCCGTGGCCTCGAACTCGGCGAAAACCGG ATTCTGGCCGGCATGCACTCGCCGCTCGACGTGATGGGCGGGCGCATCCTCGGCGAAGCCGCGGTGGCGGCCAACCTCGC GGACCCGGCCAACGCCGCGCTGAAGGCAGCGGCCTTCGCCCAGGCCCACGCCGCGCTGTACGCCGCGACCAATACCAATG CAGCGAGCTTCCCGGCGCTCGCCCATTCCGCGCCCGCCTCGAGCGACCGCTTCGCGGACTACGCGACCAATAAGGCGAAC TTCCTGCGCCGCCTCACCTTCGGTTTCGGCCAGATCAACCCGGCAACCGCCCCTGCCGTGGTGCCCAAGGGCGCCGAGGC GCTGCTCGAGACGCGCCTGCCGTACCTGAGCGCAGAGCAGCGCCGCGTGGTGCTGAAGACCACGGCGCTGGCGTCGGGCT ATCCGGTGCTGGACGACGCCGAAGGATGGGGCAGGCTGAACCTGTTCTCCGCGGCCGACGGCTACGGCCAGTTCAACGGC AACGTGGTGATCTCGATGGATGCGTCCAAGGGCGGCTTCAGCGCGTCCGATACCTGGCGCAACGACATCGGCGGCAGCGG AAAGCTCAGCTTCGCCGGCACCGGCACCCTGACGCTGGCGGGCAACAACACGTATGGCGGCGGCACCCAGGTGACGGGCG GCACCCTGGCGGCCGCGGCCCCGAACGCGTTCGGCAGCGGCGACGTCTACCTGGGCGCGGGCACGGTGGTGATCGCGGCG CCGTCGCGCGCGGTCATTGCCGGCAGGTTCACCCAACTGGCGGGCAGCACGCTGGAACTCGATCGCGGCACCGGCGACGC CGGCCGCGTCGCGGTGGGCGGCCCCGTCGCGATCGTCGGCGGCACCCTGCATGTGAAGTTCGCGCAAGGCTATGCTCCCA GGCCCGGCGACACGATCAGCCTGATCGACAGCGGCAGCTTCGCGGGCCGCTTCGACGCCGTCACGGTCGACGGCTACAAG GTGACGCCCCTGTACGGCACCTCCGGGGTCCAGGTCCACATCGACGGCTGA
Upstream 100 bases:
>100_bases CGGATCGATCCGCGACGGCTCGAACGCCTCAATCTCGACGTAAGCCTGTAACAAAACAAACGTATGGTTCAGTCTCCGAA AAATACAGGGAAACACTCAA
Downstream 100 bases:
>100_bases ACCGCGGCAGGCCCGTGGGCGGGCTCGCCCACGGCGCTCGAAGCCGCCGGCTCGGCCCGCGGCGTCCGCCGCCGGCCGGC CTGGCACGCGGCGGCGCCAT
Product: PAP2 superfamily protein
Products: NA
Alternate protein names: Beta Strand Repeat-Containing Protein; Serine Protease; Membrane-Associated Phospholipid Phosphatase; Phosphoesterase; Phosphatase Protein; Autotransporter; Phosphoesterase PA-Phosphatase ; Outer Membrane Autotransporter Barrel; Phosphoesterase PA-Phosphatase-Like Protein; Autotransporter-Associated Beta Strand Repeat Protein; Phosphatase Domain-Containing Protein; Outer Membrane Autotransporter Barrel Domain Protein; Outer Membrane Autotransporter; PAP2 Superfamily Protein; Secreted Protein; Outer Membrane Autotransporter Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MFASVPRFVRLHAIASAVTMSFLLTACGGGDDTSNSSPAVVSQVPAPPADPGYTDSAPVPSVAAFVDTAYTNQRGDARYA TMSTNAGVRVLAGFRGLWQPLSEIVDAGVNAPAAGGFPAVVASTWTGLPTDGTPNGTALNPAVLSANVQYVVSATTARSA AQADAAYYDDRRGKGYSVTDGLGPLTAAWRNAAQQTTSITSVPADATVTLYNDSGNNTGVGGTANPTFGSVVDFVNAMGN NASTEPAKRFYKYERPFRWSSSVVVVPALVPAESATPATDGGFPSGHSAEAMRDAIAMAYVVPERFQEMLARGLELGENR ILAGMHSPLDVMGGRILGEAAVAANLADPANAALKAAAFAQAHAALYAATNTNAASFPALAHSAPASSDRFADYATNKAN FLRRLTFGFGQINPATAPAVVPKGAEALLETRLPYLSAEQRRVVLKTTALASGYPVLDDAEGWGRLNLFSAADGYGQFNG NVVISMDASKGGFSASDTWRNDIGGSGKLSFAGTGTLTLAGNNTYGGGTQVTGGTLAAAAPNAFGSGDVYLGAGTVVIAA PSRAVIAGRFTQLAGSTLELDRGTGDAGRVAVGGPVAIVGGTLHVKFAQGYAPRPGDTISLIDSGSFAGRFDAVTVDGYK VTPLYGTSGVQVHIDG
Sequences:
>Translated_656_residues MFASVPRFVRLHAIASAVTMSFLLTACGGGDDTSNSSPAVVSQVPAPPADPGYTDSAPVPSVAAFVDTAYTNQRGDARYA TMSTNAGVRVLAGFRGLWQPLSEIVDAGVNAPAAGGFPAVVASTWTGLPTDGTPNGTALNPAVLSANVQYVVSATTARSA AQADAAYYDDRRGKGYSVTDGLGPLTAAWRNAAQQTTSITSVPADATVTLYNDSGNNTGVGGTANPTFGSVVDFVNAMGN NASTEPAKRFYKYERPFRWSSSVVVVPALVPAESATPATDGGFPSGHSAEAMRDAIAMAYVVPERFQEMLARGLELGENR ILAGMHSPLDVMGGRILGEAAVAANLADPANAALKAAAFAQAHAALYAATNTNAASFPALAHSAPASSDRFADYATNKAN FLRRLTFGFGQINPATAPAVVPKGAEALLETRLPYLSAEQRRVVLKTTALASGYPVLDDAEGWGRLNLFSAADGYGQFNG NVVISMDASKGGFSASDTWRNDIGGSGKLSFAGTGTLTLAGNNTYGGGTQVTGGTLAAAAPNAFGSGDVYLGAGTVVIAA PSRAVIAGRFTQLAGSTLELDRGTGDAGRVAVGGPVAIVGGTLHVKFAQGYAPRPGDTISLIDSGSFAGRFDAVTVDGYK VTPLYGTSGVQVHIDG >Mature_656_residues MFASVPRFVRLHAIASAVTMSFLLTACGGGDDTSNSSPAVVSQVPAPPADPGYTDSAPVPSVAAFVDTAYTNQRGDARYA TMSTNAGVRVLAGFRGLWQPLSEIVDAGVNAPAAGGFPAVVASTWTGLPTDGTPNGTALNPAVLSANVQYVVSATTARSA AQADAAYYDDRRGKGYSVTDGLGPLTAAWRNAAQQTTSITSVPADATVTLYNDSGNNTGVGGTANPTFGSVVDFVNAMGN NASTEPAKRFYKYERPFRWSSSVVVVPALVPAESATPATDGGFPSGHSAEAMRDAIAMAYVVPERFQEMLARGLELGENR ILAGMHSPLDVMGGRILGEAAVAANLADPANAALKAAAFAQAHAALYAATNTNAASFPALAHSAPASSDRFADYATNKAN FLRRLTFGFGQINPATAPAVVPKGAEALLETRLPYLSAEQRRVVLKTTALASGYPVLDDAEGWGRLNLFSAADGYGQFNG NVVISMDASKGGFSASDTWRNDIGGSGKLSFAGTGTLTLAGNNTYGGGTQVTGGTLAAAAPNAFGSGDVYLGAGTVVIAA PSRAVIAGRFTQLAGSTLELDRGTGDAGRVAVGGPVAIVGGTLHVKFAQGYAPRPGDTISLIDSGSFAGRFDAVTVDGYK VTPLYGTSGVQVHIDG
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66820; Mature: 66820
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFASVPRFVRLHAIASAVTMSFLLTACGGGDDTSNSSPAVVSQVPAPPADPGYTDSAPVP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC SVAAFVDTAYTNQRGDARYATMSTNAGVRVLAGFRGLWQPLSEIVDAGVNAPAAGGFPAV HHHHHHHHHHCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHH VASTWTGLPTDGTPNGTALNPAVLSANVQYVVSATTARSAAQADAAYYDDRRGKGYSVTD HHHCCCCCCCCCCCCCCCCCHHEEECCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCEECC GLGPLTAAWRNAAQQTTSITSVPADATVTLYNDSGNNTGVGGTANPTFGSVVDFVNAMGN CCCHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC NASTEPAKRFYKYERPFRWSSSVVVVPALVPAESATPATDGGFPSGHSAEAMRDAIAMAY CCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VVPERFQEMLARGLELGENRILAGMHSPLDVMGGRILGEAAVAANLADPANAALKAAAFA HHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHH QAHAALYAATNTNAASFPALAHSAPASSDRFADYATNKANFLRRLTFGFGQINPATAPAV HHHEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC VPKGAEALLETRLPYLSAEQRRVVLKTTALASGYPVLDDAEGWGRLNLFSAADGYGQFNG CCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEECC NVVISMDASKGGFSASDTWRNDIGGSGKLSFAGTGTLTLAGNNTYGGGTQVTGGTLAAAA CEEEEEECCCCCCCCCCCHHHCCCCCCEEEEECCEEEEEECCCCCCCCCEECCCEEEECC PNAFGSGDVYLGAGTVVIAAPSRAVIAGRFTQLAGSTLELDRGTGDAGRVAVGGPVAIVG CCCCCCCCEEEECCEEEEECCCCEEEEHHHHHHCCCEEEEECCCCCCCEEEECCCEEEEC GTLHVKFAQGYAPRPGDTISLIDSGSFAGRFDAVTVDGYKVTPLYGTSGVQVHIDG CEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEEEECC >Mature Secondary Structure MFASVPRFVRLHAIASAVTMSFLLTACGGGDDTSNSSPAVVSQVPAPPADPGYTDSAPVP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC SVAAFVDTAYTNQRGDARYATMSTNAGVRVLAGFRGLWQPLSEIVDAGVNAPAAGGFPAV HHHHHHHHHHCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHH VASTWTGLPTDGTPNGTALNPAVLSANVQYVVSATTARSAAQADAAYYDDRRGKGYSVTD HHHCCCCCCCCCCCCCCCCCHHEEECCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCEECC GLGPLTAAWRNAAQQTTSITSVPADATVTLYNDSGNNTGVGGTANPTFGSVVDFVNAMGN CCCHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC NASTEPAKRFYKYERPFRWSSSVVVVPALVPAESATPATDGGFPSGHSAEAMRDAIAMAY CCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VVPERFQEMLARGLELGENRILAGMHSPLDVMGGRILGEAAVAANLADPANAALKAAAFA HHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHH QAHAALYAATNTNAASFPALAHSAPASSDRFADYATNKANFLRRLTFGFGQINPATAPAV HHHEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC VPKGAEALLETRLPYLSAEQRRVVLKTTALASGYPVLDDAEGWGRLNLFSAADGYGQFNG CCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEECC NVVISMDASKGGFSASDTWRNDIGGSGKLSFAGTGTLTLAGNNTYGGGTQVTGGTLAAAA CEEEEEECCCCCCCCCCCHHHCCCCCCEEEEECCEEEEEECCCCCCCCCEECCCEEEECC PNAFGSGDVYLGAGTVVIAAPSRAVIAGRFTQLAGSTLELDRGTGDAGRVAVGGPVAIVG CCCCCCCCEEEECCEEEEECCCCEEEEHHHHHHCCCEEEEECCCCCCCEEEECCCEEEEC GTLHVKFAQGYAPRPGDTISLIDSGSFAGRFDAVTVDGYKVTPLYGTSGVQVHIDG CEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA