| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is phnW [H]
Identifier: 238023850
GI number: 238023850
Start: 460312
End: 461424
Strand: Reverse
Name: phnW [H]
Synonym: bglu_2g03890
Alternate gene names: 238023850
Gene position: 461424-460312 (Counterclockwise)
Preceding gene: 238023859
Following gene: 238023846
Centisome position: 16.32
GC content: 72.24
Gene sequence:
>1113_bases ATGCGTTCCGACCACGACCCGATTCTCCTGACGCCCGGCCCGCTGACGACCTCGCCGGCCACGCGCCGCGCCATGCAACG CGACTGGGGCTCGTGGGACGCCGCCTTCAATCGTCTGACGCAGCAGGTCTGCGCCGACCTGCTGCGCATCGCCGGTGGCG ACCACACCTATTGCTGCGTGCCGCTGCAGGGCAGCGGCACGTTCGCCGTCGAGGCCGCGCTCGGTACGCTGGTGCCGCGC GACGGCGTGGTGCTGGTGCCGAATCACGGCGCCTACTGCGCACGCATCGTCAGGATTCTCGACCGGCTCGGCATCGAGAC CGTCGAGCTGCCGTTCGCCGAACACCAAGCCGTGAACGCCGCGCAGATCGAGGCACGGCTCGCCGCCGAGCCGCGCATCA CGCACCTCGCGCTGGTGCACCTGGAAACCAGCGCCGGCATCCTCAATCCGCTCGCGGACGTCGCCGCGGCCTGCGCGCGG CACGGCACGCGGCTGATCGTCGATGCGATGAGTTCGTTCGGCGCGCTGCCGGTGGAGGTGGCCGCCCACGGCATCGACGC GCTCGTCTCGGCGAGCGGCAAATGCCTGGAAGGCGTACCGGGGATGGGTTTCGTGATCGTGCGGCGCGCCTTGCTGGCGC AGTGCGCGGGCCGCTCGCCGTCGCTCGCGCTCGACTTGCACGACCAGCAGGCCTACCTGCAGCGCACCGGGCAATGGCGC TTCACGCCGCCGACGCACGTGGTGGCCGCGCTGCACGAGGCGCTCGCGCAGTTCCACGCGCAAGGCGGCCAGCCGGCGCG CGGCGCGCGCTACGCGGCGAACTGCACCGCGCTGCTCGACGCCATGCGCGCGCTCGGCTTCGAACCGTTCCTGGCCGCCG AGGTGCAGGCCCCCGTGATCGTCACGTTCCATGCGCCGCGCGACCCCGCTTACGCGTTCGCGCCGTTCTACGCGGCCGTG CGCGAGGCCGGCTTCGTCCTGTATCCGGGCAAGCTCACGCAGGTGGAGACGTTTCGCGTGGGCTGCATCGGCGCGATCGA CGCGCCGCAGATCCGCCGCGCCGTCGCGGCGATCGACGGCGCGCTGCGCGGGCTCGGAATCGCGATACGCTGA
Upstream 100 bases:
>100_bases ACACCACTTGACTCCACAAAATGACATATTTTGCCACTACGATGCGCGCATCCGGTGCGCCGACCGCCGCGCATCGCCCT TGCACCGCCCCGGAGGCAGC
Downstream 100 bases:
>100_bases GGCCGCCGCAACCGCGCGTCGCGCCGGCCCCTGCTCACGAAAAAAGCCCGGCGCCGCCGAAGCGGAGCCGGGCCAGCCGG GCGGGTGGAGAATCTGCTAC
Product: 2-aminoethylphosphonate--pyruvate transaminase
Products: NA
Alternate protein names: 2-aminoethylphosphonate aminotransferase; AEP transaminase; AEPT [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MRSDHDPILLTPGPLTTSPATRRAMQRDWGSWDAAFNRLTQQVCADLLRIAGGDHTYCCVPLQGSGTFAVEAALGTLVPR DGVVLVPNHGAYCARIVRILDRLGIETVELPFAEHQAVNAAQIEARLAAEPRITHLALVHLETSAGILNPLADVAAACAR HGTRLIVDAMSSFGALPVEVAAHGIDALVSASGKCLEGVPGMGFVIVRRALLAQCAGRSPSLALDLHDQQAYLQRTGQWR FTPPTHVVAALHEALAQFHAQGGQPARGARYAANCTALLDAMRALGFEPFLAAEVQAPVIVTFHAPRDPAYAFAPFYAAV REAGFVLYPGKLTQVETFRVGCIGAIDAPQIRRAVAAIDGALRGLGIAIR
Sequences:
>Translated_370_residues MRSDHDPILLTPGPLTTSPATRRAMQRDWGSWDAAFNRLTQQVCADLLRIAGGDHTYCCVPLQGSGTFAVEAALGTLVPR DGVVLVPNHGAYCARIVRILDRLGIETVELPFAEHQAVNAAQIEARLAAEPRITHLALVHLETSAGILNPLADVAAACAR HGTRLIVDAMSSFGALPVEVAAHGIDALVSASGKCLEGVPGMGFVIVRRALLAQCAGRSPSLALDLHDQQAYLQRTGQWR FTPPTHVVAALHEALAQFHAQGGQPARGARYAANCTALLDAMRALGFEPFLAAEVQAPVIVTFHAPRDPAYAFAPFYAAV REAGFVLYPGKLTQVETFRVGCIGAIDAPQIRRAVAAIDGALRGLGIAIR >Mature_370_residues MRSDHDPILLTPGPLTTSPATRRAMQRDWGSWDAAFNRLTQQVCADLLRIAGGDHTYCCVPLQGSGTFAVEAALGTLVPR DGVVLVPNHGAYCARIVRILDRLGIETVELPFAEHQAVNAAQIEARLAAEPRITHLALVHLETSAGILNPLADVAAACAR HGTRLIVDAMSSFGALPVEVAAHGIDALVSASGKCLEGVPGMGFVIVRRALLAQCAGRSPSLALDLHDQQAYLQRTGQWR FTPPTHVVAALHEALAQFHAQGGQPARGARYAANCTALLDAMRALGFEPFLAAEVQAPVIVTFHAPRDPAYAFAPFYAAV REAGFVLYPGKLTQVETFRVGCIGAIDAPQIRRAVAAIDGALRGLGIAIR
Specific function: Involved in phosphonate degradation [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=253, Percent_Identity=28.4584980237154, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536281, Length=308, Percent_Identity=24.3506493506494, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017688 - InterPro: IPR000192 - InterPro: IPR012703 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.37 [H]
Molecular weight: Translated: 39272; Mature: 39272
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDHDPILLTPGPLTTSPATRRAMQRDWGSWDAAFNRLTQQVCADLLRIAGGDHTYCCV CCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PLQGSGTFAVEAALGTLVPRDGVVLVPNHGAYCARIVRILDRLGIETVELPFAEHQAVNA EECCCCCEEEEEHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCHHHHCCCH AQIEARLAAEPRITHLALVHLETSAGILNPLADVAAACARHGTRLIVDAMSSFGALPVEV HHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCHHHH AAHGIDALVSASGKCLEGVPGMGFVIVRRALLAQCAGRSPSLALDLHDQQAYLQRTGQWR HHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCC FTPPTHVVAALHEALAQFHAQGGQPARGARYAANCTALLDAMRALGFEPFLAAEVQAPVI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEE VTFHAPRDPAYAFAPFYAAVREAGFVLYPGKLTQVETFRVGCIGAIDAPQIRRAVAAIDG EEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHH ALRGLGIAIR HHHCCCEECC >Mature Secondary Structure MRSDHDPILLTPGPLTTSPATRRAMQRDWGSWDAAFNRLTQQVCADLLRIAGGDHTYCCV CCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE PLQGSGTFAVEAALGTLVPRDGVVLVPNHGAYCARIVRILDRLGIETVELPFAEHQAVNA EECCCCCEEEEEHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCHHHHCCCH AQIEARLAAEPRITHLALVHLETSAGILNPLADVAAACARHGTRLIVDAMSSFGALPVEV HHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCHHHH AAHGIDALVSASGKCLEGVPGMGFVIVRRALLAQCAGRSPSLALDLHDQQAYLQRTGQWR HHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCC FTPPTHVVAALHEALAQFHAQGGQPARGARYAANCTALLDAMRALGFEPFLAAEVQAPVI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEE VTFHAPRDPAYAFAPFYAAVREAGFVLYPGKLTQVETFRVGCIGAIDAPQIRRAVAAIDG EEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHH ALRGLGIAIR HHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA