| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is vllY [H]
Identifier: 238023846
GI number: 238023846
Start: 455300
End: 457192
Strand: Reverse
Name: vllY [H]
Synonym: bglu_2g03850
Alternate gene names: 238023846
Gene position: 457192-455300 (Counterclockwise)
Preceding gene: 238023850
Following gene: 238023845
Centisome position: 16.17
GC content: 71.32
Gene sequence:
>1893_bases ATGAAGCGTTCGATCGCCACGGTGTCGCTGTCCGGCACGCTCGTCGAAAAACTCAACGCGATCGCCGCGGCCGGCTTCGA CGGCGTGGAGATCTTCGAAAACGACCTGCTCTATTTCGACGGCTCGCCCGCCGACGTGCGCCGGATCGCGGCCGATCTCG GCCTCGAGATCGTGCTGTTCCAGCCGTTCCGCGATTTCGAGGGCGTCGATGCCGCCCAGCTCGCGCGCAATCTCGAGCGC GCGCGGCGCAAGTTCGACCTGATGCACGCGCTCGGCACCGACCGGATCCTGGTGTGCAGCAGCGTCTCGCCGCAGACCAT CGCCGACGACGCGCTGCTGACCGAGCAGCTCGGCGCGCTGGCCGAGGCCGCGCGCGGCGCGGGCGTGATCGCCGCCTACG AGGCACTGGCCTGGGGCCGCGTGGTGAAGACCTACGGCCACGCGTGGCGGCTGGTGGACGCCGTGAACAGCCCGCACCTG GGCCTCGCGCTCGACAGCTTCCACACGCTGTCGCTCGACGACGATCCCGACGGCATCGCCGCGATCCCCGGCGAGCGGAT CGCGTTCGTGCAGATCGCCGACGCGCCGAAGCTCGCGATGGACGTGCTCGAATGGAGCCGCCACTACCGCTCGTTCCCGG GCCAGGGCGACTTCGACCTCGCGCGCTTCACGGCGCGCGTGATCGAGTCGGGCTTCACGGGGCCGCTGTCGCTGGAGATC TTCAACGACGGCTTCCGCGCCGCGCCGACCGCGATCACGGCGGCCGACGGCCTGCGCTCGCTGCGGCACCTGGAGGACGT CACGCGCACGCGGCTGGCCGCCGAGGGCCGCGCGCCGGCGGCCGGCCAGCCGCTGTTCGCGCCGCCCGCCGCGCCCGCGC ACGTCGGCTTCAAGTTCATCGAGTTCGCGGTGGACGCGGCGGCGGCGGAGAACGTGGCAGGCTGGCTCGGCCGGCTGCGC TTCCGGCTGGCGGGCCGGCACCGCTCCAAGCACGTCACGCTCTATCAGCACGGCGCCGCCTCGATCGTGCTGAACGCCGA GCCCGATTCGTTCGCGGACGCGTTCTTCCAGCGGCACGGGCTGTCGCTGTGCGCCTCGGCGTTCCAGGTGGACGACGCGA AGCGCGCCTTCGAGCGCGCGGCGAGCTTCGGCTTCGCGCCGTTCTCGGGACGCGTCGGGCCCAACGAGCGCGTGGTGCCG GGCGTGCAGGCGCCGGACGGCAGCCTGCATTACCTCGTCGACGAGCGGCCCGACGCGCCGACGCTCTACGAATCGGATTT CGTGCTGACCGAGATGGACGGGCCGAGCGAACCGGGGCCGCTGACCGGCATCGACCATGTCTGCCTTGCGCTGCCGGCCG ACGCGCTCGACACCTGGGTGCTGTACCTGCGCACCGCGTTCGGCTTCGAGGCGGAAAAGAGCTGGCTGGTACCGGACCCG TATGGGCTGATGCGCAGCCGCGCCGTGCGCAGCCCGGACGGCAGCGTGCGGATCGCGCTGAACGCCTCGGTGGACCGCCA CACGGCGGTGTTCGAATCGCTGGCCCGCTATCACGGCTCGGGGCTCAACCACGTCGCGTTCCGCACCGACGACATCGTCA AGGCAGTGGCCGAGGCGAGCGCCGACGGCGTGACGTTCCTGGCGATTCCGGGCAACTACTACGACGACCTGGCCGCGCGC TACGCGCTCTCGGACGCCTTCGTCGAGCTGCTGCGCCGCCATCACCTGCTGTACGACCGCGACGAACACGGTGGCGAATT CCTGCATGCCTACACGGAGCTGGTGGACGAGCGCTTCTCGTTCGAGATCGTCGAGCGCCGCGGCGGCTACGACGGCTACG GCGCCGCCAACACCGCGGTGCGGCTGGCCGCGCAGGCGCAGCGCAGGAAGTGA
Upstream 100 bases:
>100_bases ATGTTGCGCGATCAGCGAACGCGGCCGGATTAACCCGCTGGTTCGCGGCCGGCTCGCCGGCGGGCTCGCCGCCGCCTCGA TTCCTCGCAGGAATTCATCC
Downstream 100 bases:
>100_bases GGCTCACGGCACCGGGGCCGCCGAGCGGCGAAGCACGGCAATGCCGGCCGTGCGGCCGGCGTCCGCCCCGCCGTTACAAG CCGTAACTTCGCGGCTCGCC
Product: 4-hydroxyphenylpyruvate dioxygenase
Products: homogentisate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MKRSIATVSLSGTLVEKLNAIAAAGFDGVEIFENDLLYFDGSPADVRRIAADLGLEIVLFQPFRDFEGVDAAQLARNLER ARRKFDLMHALGTDRILVCSSVSPQTIADDALLTEQLGALAEAARGAGVIAAYEALAWGRVVKTYGHAWRLVDAVNSPHL GLALDSFHTLSLDDDPDGIAAIPGERIAFVQIADAPKLAMDVLEWSRHYRSFPGQGDFDLARFTARVIESGFTGPLSLEI FNDGFRAAPTAITAADGLRSLRHLEDVTRTRLAAEGRAPAAGQPLFAPPAAPAHVGFKFIEFAVDAAAAENVAGWLGRLR FRLAGRHRSKHVTLYQHGAASIVLNAEPDSFADAFFQRHGLSLCASAFQVDDAKRAFERAASFGFAPFSGRVGPNERVVP GVQAPDGSLHYLVDERPDAPTLYESDFVLTEMDGPSEPGPLTGIDHVCLALPADALDTWVLYLRTAFGFEAEKSWLVPDP YGLMRSRAVRSPDGSVRIALNASVDRHTAVFESLARYHGSGLNHVAFRTDDIVKAVAEASADGVTFLAIPGNYYDDLAAR YALSDAFVELLRRHHLLYDRDEHGGEFLHAYTELVDERFSFEIVERRGGYDGYGAANTAVRLAAQAQRRK
Sequences:
>Translated_630_residues MKRSIATVSLSGTLVEKLNAIAAAGFDGVEIFENDLLYFDGSPADVRRIAADLGLEIVLFQPFRDFEGVDAAQLARNLER ARRKFDLMHALGTDRILVCSSVSPQTIADDALLTEQLGALAEAARGAGVIAAYEALAWGRVVKTYGHAWRLVDAVNSPHL GLALDSFHTLSLDDDPDGIAAIPGERIAFVQIADAPKLAMDVLEWSRHYRSFPGQGDFDLARFTARVIESGFTGPLSLEI FNDGFRAAPTAITAADGLRSLRHLEDVTRTRLAAEGRAPAAGQPLFAPPAAPAHVGFKFIEFAVDAAAAENVAGWLGRLR FRLAGRHRSKHVTLYQHGAASIVLNAEPDSFADAFFQRHGLSLCASAFQVDDAKRAFERAASFGFAPFSGRVGPNERVVP GVQAPDGSLHYLVDERPDAPTLYESDFVLTEMDGPSEPGPLTGIDHVCLALPADALDTWVLYLRTAFGFEAEKSWLVPDP YGLMRSRAVRSPDGSVRIALNASVDRHTAVFESLARYHGSGLNHVAFRTDDIVKAVAEASADGVTFLAIPGNYYDDLAAR YALSDAFVELLRRHHLLYDRDEHGGEFLHAYTELVDERFSFEIVERRGGYDGYGAANTAVRLAAQAQRRK >Mature_630_residues MKRSIATVSLSGTLVEKLNAIAAAGFDGVEIFENDLLYFDGSPADVRRIAADLGLEIVLFQPFRDFEGVDAAQLARNLER ARRKFDLMHALGTDRILVCSSVSPQTIADDALLTEQLGALAEAARGAGVIAAYEALAWGRVVKTYGHAWRLVDAVNSPHL GLALDSFHTLSLDDDPDGIAAIPGERIAFVQIADAPKLAMDVLEWSRHYRSFPGQGDFDLARFTARVIESGFTGPLSLEI FNDGFRAAPTAITAADGLRSLRHLEDVTRTRLAAEGRAPAAGQPLFAPPAAPAHVGFKFIEFAVDAAAAENVAGWLGRLR FRLAGRHRSKHVTLYQHGAASIVLNAEPDSFADAFFQRHGLSLCASAFQVDDAKRAFERAASFGFAPFSGRVGPNERVVP GVQAPDGSLHYLVDERPDAPTLYESDFVLTEMDGPSEPGPLTGIDHVCLALPADALDTWVLYLRTAFGFEAEKSWLVPDP YGLMRSRAVRSPDGSVRIALNASVDRHTAVFESLARYHGSGLNHVAFRTDDIVKAVAEASADGVTFLAIPGNYYDDLAAR YALSDAFVELLRRHHLLYDRDEHGGEFLHAYTELVDERFSFEIVERRGGYDGYGAANTAVRLAAQAQRRK
Specific function: Unknown
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
Organism=Homo sapiens, GI14249394, Length=239, Percent_Identity=28.0334728033473, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555220, Length=192, Percent_Identity=30.2083333333333, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356105, Length=206, Percent_Identity=28.6407766990291, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24667510, Length=206, Percent_Identity=28.6407766990291, Blast_Score=77, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 1.13.11.27
Molecular weight: Translated: 68506; Mature: 68506
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSIATVSLSGTLVEKLNAIAAAGFDGVEIFENDLLYFDGSPADVRRIAADLGLEIVLF CCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHCCCEEEECCCHHHHHHHHHHCCCEEEEE QPFRDFEGVDAAQLARNLERARRKFDLMHALGTDRILVCSSVSPQTIADDALLTEQLGAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHH AEAARGAGVIAAYEALAWGRVVKTYGHAWRLVDAVNSPHLGLALDSFHTLSLDDDPDGIA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCCEE AIPGERIAFVQIADAPKLAMDVLEWSRHYRSFPGQGDFDLARFTARVIESGFTGPLSLEI ECCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE FNDGFRAAPTAITAADGLRSLRHLEDVTRTRLAAEGRAPAAGQPLFAPPAAPAHVGFKFI ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH EFAVDAAAAENVAGWLGRLRFRLAGRHRSKHVTLYQHGAASIVLNAEPDSFADAFFQRHG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHH LSLCASAFQVDDAKRAFERAASFGFAPFSGRVGPNERVVPGVQAPDGSLHYLVDERPDAP HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC TLYESDFVLTEMDGPSEPGPLTGIDHVCLALPADALDTWVLYLRTAFGFEAEKSWLVPDP CEECCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC YGLMRSRAVRSPDGSVRIALNASVDRHTAVFESLARYHGSGLNHVAFRTDDIVKAVAEAS HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCC ADGVTFLAIPGNYYDDLAARYALSDAFVELLRRHHLLYDRDEHGGEFLHAYTELVDERFS CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH FEIVERRGGYDGYGAANTAVRLAAQAQRRK HHHHHHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKRSIATVSLSGTLVEKLNAIAAAGFDGVEIFENDLLYFDGSPADVRRIAADLGLEIVLF CCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHCCCEEEECCCHHHHHHHHHHCCCEEEEE QPFRDFEGVDAAQLARNLERARRKFDLMHALGTDRILVCSSVSPQTIADDALLTEQLGAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHH AEAARGAGVIAAYEALAWGRVVKTYGHAWRLVDAVNSPHLGLALDSFHTLSLDDDPDGIA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCCEE AIPGERIAFVQIADAPKLAMDVLEWSRHYRSFPGQGDFDLARFTARVIESGFTGPLSLEI ECCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE FNDGFRAAPTAITAADGLRSLRHLEDVTRTRLAAEGRAPAAGQPLFAPPAAPAHVGFKFI ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH EFAVDAAAAENVAGWLGRLRFRLAGRHRSKHVTLYQHGAASIVLNAEPDSFADAFFQRHG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHH LSLCASAFQVDDAKRAFERAASFGFAPFSGRVGPNERVVPGVQAPDGSLHYLVDERPDAP HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC TLYESDFVLTEMDGPSEPGPLTGIDHVCLALPADALDTWVLYLRTAFGFEAEKSWLVPDP CEECCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC YGLMRSRAVRSPDGSVRIALNASVDRHTAVFESLARYHGSGLNHVAFRTDDIVKAVAEAS HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCC ADGVTFLAIPGNYYDDLAARYALSDAFVELLRRHHLLYDRDEHGGEFLHAYTELVDERFS CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH FEIVERRGGYDGYGAANTAVRLAAQAQRRK HHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxyphenylpyruvate; O2
Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA