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The map label for this gene is yjhH [C]

Identifier: 238023834

GI number: 238023834

Start: 442539

End: 443456

Strand: Reverse

Name: yjhH [C]

Synonym: bglu_2g03730

Alternate gene names: 238023834

Gene position: 443456-442539 (Counterclockwise)

Preceding gene: 238023836

Following gene: 238023832

Centisome position: 15.68

GC content: 67.86

Gene sequence:

>918_bases
ATGACCACGCCTCAGGAACTCAAGCAGATCATTTCGGAAGGGCTGCTGTCCTTCCCCGTCACCGACTTCGACGCCGAGGG
CAACTTCCGCCCGGGCACCTATGTCGAACGCCTCGAATGGCTCGCGCCCTACGGCGCCTCGGCCCTGTTCGTGGCCGGCG
GCACCGGCGAGTTCTTCTCGCTCACGCGTGAGGACTACTCGAACGTGGTGCGCACCGCCACCGCAACCTGCAAGGGCAAG
GTGCCGATCCTGGCCGGTGCCGGCGGCCCCACGCGCGTGGCCATCGAGTACGCCAAGGAAGCCCAGCGCCTGGGCGCCAA
CGGCATCCTGCTGATGCCGCACTACCTGACCGAAGCCTCGCAGGAAGGCATCGCCGCGCACGCCGAGGAAGTCTGCAAGG
CCGTGCCCGACATCGGCGTGATCATCTACAACCGCGCCAACTCCAAGCTCAACGCCGACATGCTCGAGCGGCTGGCCGAG
CGCTGCCCGAACCTGATCGGCTTCAAGGACGGCGTGGGCGAGATCGAGGCAATGGTCACCATCCGCCGCCGCCTGGGCGA
GCGCTTCGCCTACCTCGGCGGCCTGCCCACCGCGGAAGTCTATGCCGCGGCCTACAAGGCGCTGGGCGTGCCGGTGTACT
CCTCGGCGGTGTTCAACTTCATCCCGAAGACGGCGATGGACTTCTACCGCGCGATCGCGGCCGACGACCACGCCACGGTC
GGCAAGCTGATCGACGACTTCTTCCTGCCGTACCTGAAGATCCGCAACCGCCGCGCCGGCTACGCGGTCAGCATCGTGAA
GGCCGGCGCGAAGCTGGTCGGCCACGACGCCGGCCCGGTGCGCGCTCCGCTCACCGACCTGGACGAAGCCGAACTGGCCC
AGCTCGACGCGCTGATCAAGCAGCTCGGCGCGCAGTAA

Upstream 100 bases:

>100_bases
GCGGAGGCTTGCGCCGGTCCCATTGATGTTGTACGATGACATACAACACATTCCTCGTTACCGAATGAACCCGCGCCCGG
CGCACCTAGGACGATCCAAC

Downstream 100 bases:

>100_bases
GCGCGGCAGGCCGGCGCGCCTGCGGCCACCGCTCTCGACAACCCCTCGCCTCCCCCCGGGAGCGGGGGGTTTGGCTTTCT
GGCCGCCGCTGCATGCCCGA

Product: 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTTPQELKQIISEGLLSFPVTDFDAEGNFRPGTYVERLEWLAPYGASALFVAGGTGEFFSLTREDYSNVVRTATATCKGK
VPILAGAGGPTRVAIEYAKEAQRLGANGILLMPHYLTEASQEGIAAHAEEVCKAVPDIGVIIYNRANSKLNADMLERLAE
RCPNLIGFKDGVGEIEAMVTIRRRLGERFAYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYRAIAADDHATV
GKLIDDFFLPYLKIRNRRAGYAVSIVKAGAKLVGHDAGPVRAPLTDLDEAELAQLDALIKQLGAQ

Sequences:

>Translated_305_residues
MTTPQELKQIISEGLLSFPVTDFDAEGNFRPGTYVERLEWLAPYGASALFVAGGTGEFFSLTREDYSNVVRTATATCKGK
VPILAGAGGPTRVAIEYAKEAQRLGANGILLMPHYLTEASQEGIAAHAEEVCKAVPDIGVIIYNRANSKLNADMLERLAE
RCPNLIGFKDGVGEIEAMVTIRRRLGERFAYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYRAIAADDHATV
GKLIDDFFLPYLKIRNRRAGYAVSIVKAGAKLVGHDAGPVRAPLTDLDEAELAQLDALIKQLGAQ
>Mature_304_residues
TTPQELKQIISEGLLSFPVTDFDAEGNFRPGTYVERLEWLAPYGASALFVAGGTGEFFSLTREDYSNVVRTATATCKGKV
PILAGAGGPTRVAIEYAKEAQRLGANGILLMPHYLTEASQEGIAAHAEEVCKAVPDIGVIIYNRANSKLNADMLERLAER
CPNLIGFKDGVGEIEAMVTIRRRLGERFAYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYRAIAADDHATVG
KLIDDFFLPYLKIRNRRAGYAVSIVKAGAKLVGHDAGPVRAPLTDLDEAELAQLDALIKQLGAQ

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI87082415, Length=233, Percent_Identity=26.6094420600858, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788823, Length=235, Percent_Identity=25.531914893617, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786463, Length=219, Percent_Identity=28.7671232876712, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.41 [H]

Molecular weight: Translated: 32904; Mature: 32773

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPQELKQIISEGLLSFPVTDFDAEGNFRPGTYVERLEWLAPYGASALFVAGGTGEFFS
CCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHH
LTREDYSNVVRTATATCKGKVPILAGAGGPTRVAIEYAKEAQRLGANGILLMPHYLTEAS
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHH
QEGIAAHAEEVCKAVPDIGVIIYNRANSKLNADMLERLAERCPNLIGFKDGVGEIEAMVT
HCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IRRRLGERFAYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYRAIAADDHATV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GKLIDDFFLPYLKIRNRRAGYAVSIVKAGAKLVGHDAGPVRAPLTDLDEAELAQLDALIK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
QLGAQ
HHCCC
>Mature Secondary Structure 
TTPQELKQIISEGLLSFPVTDFDAEGNFRPGTYVERLEWLAPYGASALFVAGGTGEFFS
CCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHH
LTREDYSNVVRTATATCKGKVPILAGAGGPTRVAIEYAKEAQRLGANGILLMPHYLTEAS
HHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHH
QEGIAAHAEEVCKAVPDIGVIIYNRANSKLNADMLERLAERCPNLIGFKDGVGEIEAMVT
HCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IRRRLGERFAYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYRAIAADDHATV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GKLIDDFFLPYLKIRNRRAGYAVSIVKAGAKLVGHDAGPVRAPLTDLDEAELAQLDALIK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
QLGAQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA