| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023829
Identifier: 238023829
GI number: 238023829
Start: 434790
End: 436055
Strand: Reverse
Name: 238023829
Synonym: bglu_2g03670
Alternate gene names: NA
Gene position: 436055-434790 (Counterclockwise)
Preceding gene: 238023830
Following gene: 238023828
Centisome position: 15.42
GC content: 73.14
Gene sequence:
>1266_bases ATGCAGGGGCTGCGCTCGTGGACGCGCGGCCAGGCCGGCCGCGCCTTCTCCATGTCGCTCGCCGTCGGCGCCGCGATCGT GCTGAGCGACGCGGCGCGCCACCACCCGCCCGTGATCGTCGCGCTCGGCCATGCGCTCGCGACGGCCGCGAGCCTCTGCG CCGGGTTCGGCATCGTCTACACGCTGATCGCGGCCGTCCTGACCGGGCGCTTTTTCGCGCGCGCGCCGGCGCTGCCCACC CAGTACCCGCCCGTCACGCTGATGAAGCCGCTGCACGGCGACGAGTGGCAGCTCGTCGAGCACCTGGCCAGCTTCTTCGA TCAGGACTATCCGGGCCCGGTGCAATACCTGTTCGGCGTCCACGACGCCAACGACGCCGCGCTGCGCGCCGTCGCGACGC TGCGCGAGCGTTATCCGCAGGCACACGTCACGGTGGTGGCCGACGCGCGGCTGTACGGCCCGAACCGCAAGATCTGCAAT CTCGTCAACATGCTGGAGCAGGCCGAGCACGCGCTGCTCTGCTTCGCCGACAGCGACGTGCGCGTGGGCCGCGATTATCT GCGGCGCGTCGTCGGCGCGCTGGAGCAACCCGGCGTCGGGCTCGTGACGAGCGCCTATCGCGGCATCAGCGCGCCCGGCC GGTGGCCGCGCGCGGCGGCGGCGGCCACCAACTACCAGTTCTTCCCCGGCGTGGTCACCGGTCTCGCAACCCGGCTCGCG CGGCCCTGCTTCGGTCAGACCATCGCGATGCGACGCGCCACGCTCGAGGCGATCGGCGGGCTCGCCGCGTTCGCGCACCA CCTCGCCGAGGACCACGCGATCGGCGAGGCCGTGCGCGGCATCGGCGCGACGGTGGCGGTTCCGCCGCTGCTCGTCGATC ACGCCTGCATCGAATCGACCTTCCGTGCCCTGTTCGCGCACGAGCTGCGCTGGAGCCGGACCATCCGCGCGGCCGACCCG CTGGGCCATCTCGGCTCGGCGCTGATGCATCCGCTGCCGTTCGCGCTGCTCGCCTTGCTCGCCTCCGGCGGCGCGCTCGG CGCCGGGTGGCTGGTGGCCGCGGCGCTCGCCGCGCGCTTCGCGCTGAAGTGGCGCGTCGATCGCGCGTTCGGCCAGCCGT TCGCCGATCTGGCGCTGCTGCCGCTCAACGACTTGCTGCAGTTCGGCATCTTCGTGGCGAGCTTCGCGATGTCCGACGTG GTGTGGCGCGGCCGCCGGCTGCGCGTCGACCCGTCGGGCCGGCTGGTGCCCCGCCTCGACGAATGA
Upstream 100 bases:
>100_bases GGGAGATCGTGCGCGAGATGCTGTCGAGCTGGGACATGACGAAGCGCCGCCTGCGCGAAGGCGTCGAGTTCTTCCGCTTC CTGCGCGCGCACGAGGCGTG
Downstream 100 bases:
>100_bases GCGCGCGCGACCCCCTGCCCGCCGTCACGAGCCGACCCATCGTCATGCCCACGACCGCGTCGCGCCTCGCCAAACCGCGC CGGAGCCGCGCATGAAATCG
Product: hopanoid biosynthesis associated glycosyl transferase protein HpnI
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyltransferase Family; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MQGLRSWTRGQAGRAFSMSLAVGAAIVLSDAARHHPPVIVALGHALATAASLCAGFGIVYTLIAAVLTGRFFARAPALPT QYPPVTLMKPLHGDEWQLVEHLASFFDQDYPGPVQYLFGVHDANDAALRAVATLRERYPQAHVTVVADARLYGPNRKICN LVNMLEQAEHALLCFADSDVRVGRDYLRRVVGALEQPGVGLVTSAYRGISAPGRWPRAAAAATNYQFFPGVVTGLATRLA RPCFGQTIAMRRATLEAIGGLAAFAHHLAEDHAIGEAVRGIGATVAVPPLLVDHACIESTFRALFAHELRWSRTIRAADP LGHLGSALMHPLPFALLALLASGGALGAGWLVAAALAARFALKWRVDRAFGQPFADLALLPLNDLLQFGIFVASFAMSDV VWRGRRLRVDPSGRLVPRLDE
Sequences:
>Translated_421_residues MQGLRSWTRGQAGRAFSMSLAVGAAIVLSDAARHHPPVIVALGHALATAASLCAGFGIVYTLIAAVLTGRFFARAPALPT QYPPVTLMKPLHGDEWQLVEHLASFFDQDYPGPVQYLFGVHDANDAALRAVATLRERYPQAHVTVVADARLYGPNRKICN LVNMLEQAEHALLCFADSDVRVGRDYLRRVVGALEQPGVGLVTSAYRGISAPGRWPRAAAAATNYQFFPGVVTGLATRLA RPCFGQTIAMRRATLEAIGGLAAFAHHLAEDHAIGEAVRGIGATVAVPPLLVDHACIESTFRALFAHELRWSRTIRAADP LGHLGSALMHPLPFALLALLASGGALGAGWLVAAALAARFALKWRVDRAFGQPFADLALLPLNDLLQFGIFVASFAMSDV VWRGRRLRVDPSGRLVPRLDE >Mature_421_residues MQGLRSWTRGQAGRAFSMSLAVGAAIVLSDAARHHPPVIVALGHALATAASLCAGFGIVYTLIAAVLTGRFFARAPALPT QYPPVTLMKPLHGDEWQLVEHLASFFDQDYPGPVQYLFGVHDANDAALRAVATLRERYPQAHVTVVADARLYGPNRKICN LVNMLEQAEHALLCFADSDVRVGRDYLRRVVGALEQPGVGLVTSAYRGISAPGRWPRAAAAATNYQFFPGVVTGLATRLA RPCFGQTIAMRRATLEAIGGLAAFAHHLAEDHAIGEAVRGIGATVAVPPLLVDHACIESTFRALFAHELRWSRTIRAADP LGHLGSALMHPLPFALLALLASGGALGAGWLVAAALAARFALKWRVDRAFGQPFADLALLPLNDLLQFGIFVASFAMSDV VWRGRRLRVDPSGRLVPRLDE
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=244, Percent_Identity=28.6885245901639, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI25147526, Length=300, Percent_Identity=25.3333333333333, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25149574, Length=220, Percent_Identity=26.3636363636364, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI32564728, Length=218, Percent_Identity=26.605504587156, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25149577, Length=218, Percent_Identity=26.605504587156, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24657569, Length=283, Percent_Identity=28.2685512367491, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45201; Mature: 45201
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLRSWTRGQAGRAFSMSLAVGAAIVLSDAARHHPPVIVALGHALATAASLCAGFGIVY CCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH TLIAAVLTGRFFARAPALPTQYPPVTLMKPLHGDEWQLVEHLASFFDQDYPGPVQYLFGV HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCC HDANDAALRAVATLRERYPQAHVTVVADARLYGPNRKICNLVNMLEQAEHALLCFADSDV CCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHCCCEEEEEECCCC RVGRDYLRRVVGALEQPGVGLVTSAYRGISAPGRWPRAAAAATNYQFFPGVVTGLATRLA HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH RPCFGQTIAMRRATLEAIGGLAAFAHHLAEDHAIGEAVRGIGATVAVPPLLVDHACIEST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH FRALFAHELRWSRTIRAADPLGHLGSALMHPLPFALLALLASGGALGAGWLVAAALAARF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALKWRVDRAFGQPFADLALLPLNDLLQFGIFVASFAMSDVVWRGRRLRVDPSGRLVPRLD HHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC E C >Mature Secondary Structure MQGLRSWTRGQAGRAFSMSLAVGAAIVLSDAARHHPPVIVALGHALATAASLCAGFGIVY CCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH TLIAAVLTGRFFARAPALPTQYPPVTLMKPLHGDEWQLVEHLASFFDQDYPGPVQYLFGV HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCC HDANDAALRAVATLRERYPQAHVTVVADARLYGPNRKICNLVNMLEQAEHALLCFADSDV CCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHCCCEEEEEECCCC RVGRDYLRRVVGALEQPGVGLVTSAYRGISAPGRWPRAAAAATNYQFFPGVVTGLATRLA HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH RPCFGQTIAMRRATLEAIGGLAAFAHHLAEDHAIGEAVRGIGATVAVPPLLVDHACIEST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH FRALFAHELRWSRTIRAADPLGHLGSALMHPLPFALLALLASGGALGAGWLVAAALAARF HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALKWRVDRAFGQPFADLALLPLNDLLQFGIFVASFAMSDVVWRGRRLRVDPSGRLVPRLD HHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA