| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023819
Identifier: 238023819
GI number: 238023819
Start: 422906
End: 423793
Strand: Reverse
Name: 238023819
Synonym: bglu_2g03570
Alternate gene names: NA
Gene position: 423793-422906 (Counterclockwise)
Preceding gene: 238023821
Following gene: 238023814
Centisome position: 14.99
GC content: 68.58
Gene sequence:
>888_bases ATGGTCGAGCGGCGCGCAAGGCCGCGCGCCGGCCGCGCGCCGGGCGCGTTTCACCGCATCGCGTCGGCCGCCTGTTCGCT GATCGCCTCGCTGCTGGTGACGAGCGGCGGCGTCCAAGCGGCCGACCTCGTGGTGCCGGCGTATTTCTATCCGTCCGGCT CCGGCGCGACCGCCTGGAACACGCTCGCGACCAATGCCGCCTCGGTGCCGCTCACGGCCATCGTCAACCCGAACAGCGGC CCGGGCACGGCGGCCGATCCGGCCTATACCGGCGCGATCGCGAAGCTGCGCGCCGCGGGCGGCAAGGTGATCGCCTACGT CCACACCTCGTATGGCGCCCGCCCGCTGTCCGACGTGACGGCCGACATCAACAAATACCTGGCGTTCTACGCGGTGGACG GCTTCTTCATCGACGAAATGGCCAACGACGCCACGACCGCCCACGTCCAGTACTACCAGTCGCTCTACAACTACATCAAG GGGCTCTCGCCGAACTATCAGGTGGTCAACAACCCCGGCACCACCCTGCCCGAGATCTACGCGAGCCTGCCGGTGGCGGA CCGCTTCGTCGTCTACGAGAACAAGCAGGCCAACTATGCCGGCTTCGTGCCGAACGCCTGGCAGGCCGCCTACGGCGCGG ACCGCTTCGTCCACATCGTCTACAACGCGAGCGCGTCGCAATTGACCGGGGTCTTGCAGCTCGCCGTGACGAACGGCGCG GGCGGCATCTATGTCACCTCGCTGAAACTGCCGAATCCGTACAACGGGCTGCCGTCGTACTGGTCGCAGGAAGTGTTGGC CGTCGCGGCGCTCAATCCGGCGCCCGTCAGCGCGCTCGGCAAGAACGGCCGGGCGGCGGCGGTGCGGCCCGGCGGCAAGA GACGCTGA
Upstream 100 bases:
>100_bases ATTACCAGACGCGACGGGCGCGAGCCCGCGGCGGCCAGACCCGCAAGCGAGACCAGCCATGACTCATTCGTATGCTTCGA CGTCCATTTCTCCGTCACTC
Downstream 100 bases:
>100_bases GGCAGCGGGCCGGGCGGCTGGGCGGGCTCGCCCCTGCGCCATGCCGGCCGCCGCCCCTCGGCCGAGGCCGACCGGCCCCC GCGCCTGCCGCGAGCGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MVERRARPRAGRAPGAFHRIASAACSLIASLLVTSGGVQAADLVVPAYFYPSGSGATAWNTLATNAASVPLTAIVNPNSG PGTAADPAYTGAIAKLRAAGGKVIAYVHTSYGARPLSDVTADINKYLAFYAVDGFFIDEMANDATTAHVQYYQSLYNYIK GLSPNYQVVNNPGTTLPEIYASLPVADRFVVYENKQANYAGFVPNAWQAAYGADRFVHIVYNASASQLTGVLQLAVTNGA GGIYVTSLKLPNPYNGLPSYWSQEVLAVAALNPAPVSALGKNGRAAAVRPGGKRR
Sequences:
>Translated_295_residues MVERRARPRAGRAPGAFHRIASAACSLIASLLVTSGGVQAADLVVPAYFYPSGSGATAWNTLATNAASVPLTAIVNPNSG PGTAADPAYTGAIAKLRAAGGKVIAYVHTSYGARPLSDVTADINKYLAFYAVDGFFIDEMANDATTAHVQYYQSLYNYIK GLSPNYQVVNNPGTTLPEIYASLPVADRFVVYENKQANYAGFVPNAWQAAYGADRFVHIVYNASASQLTGVLQLAVTNGA GGIYVTSLKLPNPYNGLPSYWSQEVLAVAALNPAPVSALGKNGRAAAVRPGGKRR >Mature_295_residues MVERRARPRAGRAPGAFHRIASAACSLIASLLVTSGGVQAADLVVPAYFYPSGSGATAWNTLATNAASVPLTAIVNPNSG PGTAADPAYTGAIAKLRAAGGKVIAYVHTSYGARPLSDVTADINKYLAFYAVDGFFIDEMANDATTAHVQYYQSLYNYIK GLSPNYQVVNNPGTTLPEIYASLPVADRFVVYENKQANYAGFVPNAWQAAYGADRFVHIVYNASASQLTGVLQLAVTNGA GGIYVTSLKLPNPYNGLPSYWSQEVLAVAALNPAPVSALGKNGRAAAVRPGGKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30951; Mature: 30951
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERRARPRAGRAPGAFHRIASAACSLIASLLVTSGGVQAADLVVPAYFYPSGSGATAWN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEEEEEECCCCCCCHHH TLATNAASVPLTAIVNPNSGPGTAADPAYTGAIAKLRAAGGKVIAYVHTSYGARPLSDVT HHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH ADINKYLAFYAVDGFFIDEMANDATTAHVQYYQSLYNYIKGLSPNYQVVNNPGTTLPEIY HHHHHHEEEEEECCEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH ASLPVADRFVVYENKQANYAGFVPNAWQAAYGADRFVHIVYNASASQLTGVLQLAVTNGA HCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEEECCHHHHHEEEEEEEECCC GGIYVTSLKLPNPYNGLPSYWSQEVLAVAALNPAPVSALGKNGRAAAVRPGGKRR CCEEEEEEECCCCCCCCCCHHHHHEEEEEECCCCCHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure MVERRARPRAGRAPGAFHRIASAACSLIASLLVTSGGVQAADLVVPAYFYPSGSGATAWN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEEEEEECCCCCCCHHH TLATNAASVPLTAIVNPNSGPGTAADPAYTGAIAKLRAAGGKVIAYVHTSYGARPLSDVT HHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH ADINKYLAFYAVDGFFIDEMANDATTAHVQYYQSLYNYIKGLSPNYQVVNNPGTTLPEIY HHHHHHEEEEEECCEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH ASLPVADRFVVYENKQANYAGFVPNAWQAAYGADRFVHIVYNASASQLTGVLQLAVTNGA HCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEEECCHHHHHEEEEEEEECCC GGIYVTSLKLPNPYNGLPSYWSQEVLAVAALNPAPVSALGKNGRAAAVRPGGKRR CCEEEEEEECCCCCCCCCCHHHHHEEEEEECCCCCHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA