| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yqhA [C]
Identifier: 238023804
GI number: 238023804
Start: 403196
End: 403741
Strand: Direct
Name: yqhA [C]
Synonym: bglu_2g03400
Alternate gene names: 238023804
Gene position: 403196-403741 (Clockwise)
Preceding gene: 238023803
Following gene: 339717965
Centisome position: 14.26
GC content: 59.52
Gene sequence:
>546_bases ATGCGACCCACGGAAGAAACGAAAGGCCATGCGTCGAATGCCGCCGAGAGACTGTTCGAACACGGTCTGTTTGCGAGCCG CTGGGTGTTGGCGCCGATCTATGCGGGGCTGGCGCTCGGGATGCTCATGTTGCTGATCAAGTTCTGCCAGGAGTTCTGGC ATCTGGCCGTCACGCTGCTCGATAGTGAAGTGGAGGACGTCATCCTCGGGGTGCTGTCGCTCGTCGACCTCTCGCTGATG GCCAATCTTCTGCTCATGATCATATTCGGCGGCTATCAGAATTTTGTCTCGCGGCTCAAGCTCGGCGGTCACGAGGACAC GCCGGAATGGATCGGACACGTCGGATTCACCGACATCAAGCTGAAGCTGATGGCGTCGATCGTGGCGATATCGGCCATCG AGGTGCTGCGTGGATTTCTGTCGCTCGACAAGGTCGGTCTGACGACGATCATCTGGGGGATCGCGGTGCACATGACCTTT GTGCTGTCGGCGGTCCTGCTCGCGGGGATGGACTGGATCAGCGCCAAGACCCGGGCGATCAAGTGA
Upstream 100 bases:
>100_bases CGTCCCGGTCGAACGGCACCAGCCGGCGGGCCGGCGCAAGCAAATGTGTCGGCATGCCGACGACGATGACACAGCCGGCA CGCCGGTATCGAGGAAGATG
Downstream 100 bases:
>100_bases GCCAACCGGCCCGCGCGCCTGCGCGGGCCGGTTGGCTGCCGGGCGTCAGCGCTTGGCCGTGACGTCGGCGCGCGAGCGCG CCAGATAGGCGTCGGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLLDSEVEDVILGVLSLVDLSLM ANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIKLKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTF VLSAVLLAGMDWISAKTRAIK
Sequences:
>Translated_181_residues MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLLDSEVEDVILGVLSLVDLSLM ANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIKLKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTF VLSAVLLAGMDWISAKTRAIK >Mature_181_residues MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLLDSEVEDVILGVLSLVDLSLM ANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIKLKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTF VLSAVLLAGMDWISAKTRAIK
Specific function: Unknown
COG id: COG2862
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0114 family [H]
Homologues:
Organism=Escherichia coli, GI1789376, Length=156, Percent_Identity=42.3076923076923, Blast_Score=128, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005134 - InterPro: IPR020761 - InterPro: IPR020765 [H]
Pfam domain/function: PF03350 UPF0114 [H]
EC number: NA
Molecular weight: Translated: 19937; Mature: 19937
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLL CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSEVEDVILGVLSLVDLSLMANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHH LKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTFVLSAVLLAGMDWISAKTRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC K C >Mature Secondary Structure MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLL CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSEVEDVILGVLSLVDLSLMANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHH LKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTFVLSAVLLAGMDWISAKTRAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA