Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023769

Identifier: 238023769

GI number: 238023769

Start: 353046

End: 354575

Strand: Direct

Name: 238023769

Synonym: bglu_2g03010

Alternate gene names: NA

Gene position: 353046-354575 (Clockwise)

Preceding gene: 238023768

Following gene: 238023770

Centisome position: 12.49

GC content: 73.66

Gene sequence:

>1530_bases
ATGGCCGCGCCGACACCCGCGGCCGGCGCGCGGCGGCGCTACGGCATCGTCGGCGGCCTTGGGCCGCTGGCGGGCGCCGA
CGTGTTCGGCAAGCTGATGCGCGCCGCGCTCGCGCAGTCCGGCGCCGAGCCGCTCGACGCGATCCTGGAGCAGCGGCCGT
GGCGCGGCGCCGGCTCGGATCGCGTGGCCACCAGCGAACGCAAGCTCTACGTGTTCGACCGGATTCGCGAGTTCGAGCGG
CGCGGCGTGACCATCGTCGTGCTGCCGTGCTTCCTGAGCCATACGTTCCTCGACGAACTGCGCGCGAACACGCCGCTCGC
GATCGTCGACATCGTCGAGGCGGTGCGCGAGCACGTGCGTCGCGCCTATCCGGCGGCACGGCGTATCGGCGTGCTGGCCT
CGGCGGCGACGCGCGAGGCCCGGCTGTTCGAGCGGTATTTCACGGCGCCCGACTTCGTGCTCGTCCATCCGGCCAGGGAC
GCGGCCGAGCACGTGACGGGCGGTGACGCGGTGACCGAGGCCGTCTACGGAGCCGACGGGATTCGCGACGGCTACACGGC
CGGCCGCCCGGCCGAACTGCTGCGGCGCGCCTGCGAGTCGCTCGTCGCGCAGGGCGCCGACCTGATCGTGCCGGGCTTGA
CCGAGATCGCGCTCGCGGCCGACGCGATCGGTCCGCTGCCGGTGCCGTTGATCGATTCGAACGCGGTCTACGCGCACTAC
GTGCTGGCCGCCGGCACGGGCGAGCCGGGCGGCGGCCCCGCCGCGGAACCGGGGCCGCTGCGGATCGGCGTGGTGGGCGG
CGTGGGGCCGGCCGCGACCGTCGATTTCCTGCGCAAACTGGTGGACCACACGCCGGCCGCGCGCGATCAGGACCATTTGA
AGGTGCTGGTCGAGCAGAACCCCCAGATCCCCGATCGCACCGCTCACCTGATCGGCGACGGCCCCGATCCCACCGTCTCG
CTCTATGCCGCCTGCAAGCGCCTGGAGCAGGGCGGCGCGGACCTGGTGGCGATTCCGTGCAACACCGCGCACGCGTTCGT
CGAGCGCATCCAGCCGCATCTGGGCATTCCGATCATCAACATGCTGACGGTGACGGCGCGCCGCCTGCGCGAGCGCTTCC
CGGCGCTGCGCGAGGTCGGCGTGCTGGCCACGTCGGGCACGCTCGCGAGCGGCGTCTACCGCGACGCCTTGGCCGCCGAG
GGCTTCGCGCAGCAGGTGCCGCCGCCGGCGCTGCAGGCGCGGGTGATGGCGGCGATCTACGGCAAGTTCGGCGTGAAGGC
CGGCTTTACCGAAGGCCGTTGCCGCGAGGACATCGGCGCGGCGCTCGACGCGCTGATCGCAGCCGGCGCCGCCGTGGTGC
TGCTCGGCTGCACGGAGCTGCCGCTGCTGCTGCCGATGGCCGACTACGTCGCGCCGGATGGCGCGCACGCGGTGCTGGTC
GATCCGACCGAGGTGCTCGCGAAGGCCTGCATCGCGCTTGCCAGGGGCGGCGGGGGGCCGGCGGCGGGCCTCGCCGGAGT
GCGGGTTTGA

Upstream 100 bases:

>100_bases
TGGCGACGGCCGTGATCGCGAAATGGGAGGGGCGGCGCGAGGCGGGGGCCGCCGATGCGGCGCATTTCGAACGCGAGCGG
CTGCCGGGCGAGTCGCAATG

Downstream 100 bases:

>100_bases
TCAAAAAAATCGATCGTCAGATCGGAAAAATATCGTTTTTAATCAATAAAACGCATCGGTAAGATGAAGCTCGTCGCCCT
GCCGTGCGAGCGCCGCGCGG

Product: Aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MAAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSDRVATSERKLYVFDRIREFER
RGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVRRAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARD
AAEHVTGGDAVTEAVYGADGIRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY
VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQNPQIPDRTAHLIGDGPDPTVS
LYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAE
GFAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV
DPTEVLAKACIALARGGGGPAAGLAGVRV

Sequences:

>Translated_509_residues
MAAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSDRVATSERKLYVFDRIREFER
RGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVRRAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARD
AAEHVTGGDAVTEAVYGADGIRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY
VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQNPQIPDRTAHLIGDGPDPTVS
LYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAE
GFAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV
DPTEVLAKACIALARGGGGPAAGLAGVRV
>Mature_508_residues
AAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSDRVATSERKLYVFDRIREFERR
GVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVRRAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARDA
AEHVTGGDAVTEAVYGADGIRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHYV
LAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQNPQIPDRTAHLIGDGPDPTVSL
YAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEG
FAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLVD
PTEVLAKACIALARGGGGPAAGLAGVRV

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 53139; Mature: 53008

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
RVATSERKLYVFDRIREFERRGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVR
CEECCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARDAAEHVTGGDAVTEAVYGADG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHCCCC
IRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY
CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCEECCCCEEEEE
VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQN
EEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHEEHHHCC
PQIPDRTAHLIGDGPDPTVSLYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIIN
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCHHHH
MLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEGFAQQVPPPALQARVMAAIY
HHHHHHHHHHHHCHHHHHHCCEEECCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
GKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHCCCCCCCEEEE
DPTEVLAKACIALARGGGGPAAGLAGVRV
CHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
RVATSERKLYVFDRIREFERRGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVR
CEECCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARDAAEHVTGGDAVTEAVYGADG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHCCCC
IRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY
CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCEECCCCEEEEE
VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQN
EEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHEEHHHCC
PQIPDRTAHLIGDGPDPTVSLYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIIN
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCHHHH
MLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEGFAQQVPPPALQARVMAAIY
HHHHHHHHHHHHCHHHHHHCCEEECCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
GKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV
HHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHCCCCCCCEEEE
DPTEVLAKACIALARGGGGPAAGLAGVRV
CHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]