| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023769
Identifier: 238023769
GI number: 238023769
Start: 353046
End: 354575
Strand: Direct
Name: 238023769
Synonym: bglu_2g03010
Alternate gene names: NA
Gene position: 353046-354575 (Clockwise)
Preceding gene: 238023768
Following gene: 238023770
Centisome position: 12.49
GC content: 73.66
Gene sequence:
>1530_bases ATGGCCGCGCCGACACCCGCGGCCGGCGCGCGGCGGCGCTACGGCATCGTCGGCGGCCTTGGGCCGCTGGCGGGCGCCGA CGTGTTCGGCAAGCTGATGCGCGCCGCGCTCGCGCAGTCCGGCGCCGAGCCGCTCGACGCGATCCTGGAGCAGCGGCCGT GGCGCGGCGCCGGCTCGGATCGCGTGGCCACCAGCGAACGCAAGCTCTACGTGTTCGACCGGATTCGCGAGTTCGAGCGG CGCGGCGTGACCATCGTCGTGCTGCCGTGCTTCCTGAGCCATACGTTCCTCGACGAACTGCGCGCGAACACGCCGCTCGC GATCGTCGACATCGTCGAGGCGGTGCGCGAGCACGTGCGTCGCGCCTATCCGGCGGCACGGCGTATCGGCGTGCTGGCCT CGGCGGCGACGCGCGAGGCCCGGCTGTTCGAGCGGTATTTCACGGCGCCCGACTTCGTGCTCGTCCATCCGGCCAGGGAC GCGGCCGAGCACGTGACGGGCGGTGACGCGGTGACCGAGGCCGTCTACGGAGCCGACGGGATTCGCGACGGCTACACGGC CGGCCGCCCGGCCGAACTGCTGCGGCGCGCCTGCGAGTCGCTCGTCGCGCAGGGCGCCGACCTGATCGTGCCGGGCTTGA CCGAGATCGCGCTCGCGGCCGACGCGATCGGTCCGCTGCCGGTGCCGTTGATCGATTCGAACGCGGTCTACGCGCACTAC GTGCTGGCCGCCGGCACGGGCGAGCCGGGCGGCGGCCCCGCCGCGGAACCGGGGCCGCTGCGGATCGGCGTGGTGGGCGG CGTGGGGCCGGCCGCGACCGTCGATTTCCTGCGCAAACTGGTGGACCACACGCCGGCCGCGCGCGATCAGGACCATTTGA AGGTGCTGGTCGAGCAGAACCCCCAGATCCCCGATCGCACCGCTCACCTGATCGGCGACGGCCCCGATCCCACCGTCTCG CTCTATGCCGCCTGCAAGCGCCTGGAGCAGGGCGGCGCGGACCTGGTGGCGATTCCGTGCAACACCGCGCACGCGTTCGT CGAGCGCATCCAGCCGCATCTGGGCATTCCGATCATCAACATGCTGACGGTGACGGCGCGCCGCCTGCGCGAGCGCTTCC CGGCGCTGCGCGAGGTCGGCGTGCTGGCCACGTCGGGCACGCTCGCGAGCGGCGTCTACCGCGACGCCTTGGCCGCCGAG GGCTTCGCGCAGCAGGTGCCGCCGCCGGCGCTGCAGGCGCGGGTGATGGCGGCGATCTACGGCAAGTTCGGCGTGAAGGC CGGCTTTACCGAAGGCCGTTGCCGCGAGGACATCGGCGCGGCGCTCGACGCGCTGATCGCAGCCGGCGCCGCCGTGGTGC TGCTCGGCTGCACGGAGCTGCCGCTGCTGCTGCCGATGGCCGACTACGTCGCGCCGGATGGCGCGCACGCGGTGCTGGTC GATCCGACCGAGGTGCTCGCGAAGGCCTGCATCGCGCTTGCCAGGGGCGGCGGGGGGCCGGCGGCGGGCCTCGCCGGAGT GCGGGTTTGA
Upstream 100 bases:
>100_bases TGGCGACGGCCGTGATCGCGAAATGGGAGGGGCGGCGCGAGGCGGGGGCCGCCGATGCGGCGCATTTCGAACGCGAGCGG CTGCCGGGCGAGTCGCAATG
Downstream 100 bases:
>100_bases TCAAAAAAATCGATCGTCAGATCGGAAAAATATCGTTTTTAATCAATAAAACGCATCGGTAAGATGAAGCTCGTCGCCCT GCCGTGCGAGCGCCGCGCGG
Product: Aspartate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MAAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSDRVATSERKLYVFDRIREFER RGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVRRAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARD AAEHVTGGDAVTEAVYGADGIRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQNPQIPDRTAHLIGDGPDPTVS LYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAE GFAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV DPTEVLAKACIALARGGGGPAAGLAGVRV
Sequences:
>Translated_509_residues MAAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSDRVATSERKLYVFDRIREFER RGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVRRAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARD AAEHVTGGDAVTEAVYGADGIRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQNPQIPDRTAHLIGDGPDPTVS LYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAE GFAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV DPTEVLAKACIALARGGGGPAAGLAGVRV >Mature_508_residues AAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSDRVATSERKLYVFDRIREFERR GVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVRRAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARDA AEHVTGGDAVTEAVYGADGIRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHYV LAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQNPQIPDRTAHLIGDGPDPTVSL YAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIINMLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEG FAQQVPPPALQARVMAAIYGKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLVD PTEVLAKACIALARGGGGPAAGLAGVRV
Specific function: Unknown
COG id: COG1794
COG function: function code M; Aspartate racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004380 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.13 [H]
Molecular weight: Translated: 53139; Mature: 53008
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC RVATSERKLYVFDRIREFERRGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVR CEECCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARDAAEHVTGGDAVTEAVYGADG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHCCCC IRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCEECCCCEEEEE VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQN EEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHEEHHHCC PQIPDRTAHLIGDGPDPTVSLYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIIN CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCHHHH MLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEGFAQQVPPPALQARVMAAIY HHHHHHHHHHHHCHHHHHHCCEEECCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH GKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV HHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHCCCCCCCEEEE DPTEVLAKACIALARGGGGPAAGLAGVRV CHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AAPTPAAGARRRYGIVGGLGPLAGADVFGKLMRAALAQSGAEPLDAILEQRPWRGAGSD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC RVATSERKLYVFDRIREFERRGVTIVVLPCFLSHTFLDELRANTPLAIVDIVEAVREHVR CEECCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RAYPAARRIGVLASAATREARLFERYFTAPDFVLVHPARDAAEHVTGGDAVTEAVYGADG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHCCCC IRDGYTAGRPAELLRRACESLVAQGADLIVPGLTEIALAADAIGPLPVPLIDSNAVYAHY CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCCCCCEECCCCEEEEE VLAAGTGEPGGGPAAEPGPLRIGVVGGVGPAATVDFLRKLVDHTPAARDQDHLKVLVEQN EEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHEEHHHCC PQIPDRTAHLIGDGPDPTVSLYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIIN CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCHHHH MLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEGFAQQVPPPALQARVMAAIY HHHHHHHHHHHHCHHHHHHCCEEECCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH GKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV HHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHCCCCCCCEEEE DPTEVLAKACIALARGGGGPAAGLAGVRV CHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2054383; 1907199 [H]