| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238023757
Identifier: 238023757
GI number: 238023757
Start: 336886
End: 337365
Strand: Direct
Name: 238023757
Synonym: bglu_2g02890
Alternate gene names: NA
Gene position: 336886-337365 (Clockwise)
Preceding gene: 238023756
Following gene: 238023766
Centisome position: 11.92
GC content: 72.29
Gene sequence:
>480_bases ATGGAGCAAACCCCCGAGGCGCTGGTCGCCGAACTCACGCAGCGCGGCGTGGCGGTGTCGGCAGGGCACGTGCGGATCGG CCGCTTCGGCGATTCGGAGGCGCTGTCCGAAGCGCTGATCGCGCTCGTGCTGACGGGCGAAAAGCATGGCACCTGCAGCC TGGCCTGGTCGTGGGAGGCCGAGGGCGAGCCGCCGCCGCAGGCCGGCGACATCGAAATCGTGCTCGACTGGCATGGCCGG CCGGCGGCGCTGCTGCGCATCAGCGAGGTGCGGATCGTGCCGTTCGACCGCGTCGACGCGGCGTTCGCGGCCAGCGAAGG CGAAGCAGATCGGTCGCTCGCGCACTGGCGGACCGAGCACTGGCGTTTCTTCACCGAGGAGTGCCGCCGCATCGGCCGGG TGGCGCACCCGGCGATGCCGCTCGTCTGCGAGAGCTTCACGCTGCTCCAGGCCATCGGGCGCCCGCCGCGCAGCGCCTGA
Upstream 100 bases:
>100_bases GATGCTGGCGGAGGCGCCGCCGGTCTGGCAGGACCAGCCGAGCGGCGCGCGGATCTGGCAGCGGGCCGGATGAAATCGCG GACGCGAGGAGAGGCCAGGT
Downstream 100 bases:
>100_bases CCATGCCTGCCGGCGCGCGCCGGCGCCTCGCGCGCGCGCCGCACATCGTCGAGCCTCAGCGCGATGCCCCCTGCGCGGCC GATGCCGGCTGGTCGGCCGC
Product: ASCH domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEQTPEALVAELTQRGVAVSAGHVRIGRFGDSEALSEALIALVLTGEKHGTCSLAWSWEAEGEPPPQAGDIEIVLDWHGR PAALLRISEVRIVPFDRVDAAFAASEGEADRSLAHWRTEHWRFFTEECRRIGRVAHPAMPLVCESFTLLQAIGRPPRSA
Sequences:
>Translated_159_residues MEQTPEALVAELTQRGVAVSAGHVRIGRFGDSEALSEALIALVLTGEKHGTCSLAWSWEAEGEPPPQAGDIEIVLDWHGR PAALLRISEVRIVPFDRVDAAFAASEGEADRSLAHWRTEHWRFFTEECRRIGRVAHPAMPLVCESFTLLQAIGRPPRSA >Mature_159_residues MEQTPEALVAELTQRGVAVSAGHVRIGRFGDSEALSEALIALVLTGEKHGTCSLAWSWEAEGEPPPQAGDIEIVLDWHGR PAALLRISEVRIVPFDRVDAAFAASEGEADRSLAHWRTEHWRFFTEECRRIGRVAHPAMPLVCESFTLLQAIGRPPRSA
Specific function: Unknown
COG id: COG4405
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17474; Mature: 17474
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTPEALVAELTQRGVAVSAGHVRIGRFGDSEALSEALIALVLTGEKHGTCSLAWSWEA CCCCHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHHHHEEEEECCCCCEEEEEEEECC EGEPPPQAGDIEIVLDWHGRPAALLRISEVRIVPFDRVDAAFAASEGEADRSLAHWRTEH CCCCCCCCCCEEEEEECCCCCEEEEEEECEEEECCCCCCHHHHCCCCCCHHHHHHHHHHH WRFFTEECRRIGRVAHPAMPLVCESFTLLQAIGRPPRSA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEQTPEALVAELTQRGVAVSAGHVRIGRFGDSEALSEALIALVLTGEKHGTCSLAWSWEA CCCCHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHHHHEEEEECCCCCEEEEEEEECC EGEPPPQAGDIEIVLDWHGRPAALLRISEVRIVPFDRVDAAFAASEGEADRSLAHWRTEH CCCCCCCCCCEEEEEECCCCCEEEEEEECEEEECCCCCCHHHHCCCCCCHHHHHHHHHHH WRFFTEECRRIGRVAHPAMPLVCESFTLLQAIGRPPRSA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA