Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023721

Identifier: 238023721

GI number: 238023721

Start: 291168

End: 292007

Strand: Direct

Name: 238023721

Synonym: bglu_2g02490

Alternate gene names: NA

Gene position: 291168-292007 (Clockwise)

Preceding gene: 238023720

Following gene: 238023724

Centisome position: 10.3

GC content: 71.43

Gene sequence:

>840_bases
ATGTCGCTCATGATTTCCAGCCCCAGCCAGCCTTCGGGCCTCGACGCGCTGTCGTCGAGCGATCCGCTGGGCGGCGCGAA
CAGCGCCAGCAGCACGCAGATGAACCAGATCGCGCAGATCATCGCGCAACTGCTCCAGGACATCGCGCAGATGTCCCAGA
TCATTCAGATGCTCAAGCAGGCCGCGCAGCAGGGCGCCGGCTCCGGGCCCGGCGGGGGCGGTGCCGCAGGCGCAGGCGGT
TTCGCGCCGGCGCAGAACCTGGCGGCCGCGCCGACGGGCGGCGGCGGTGGCGGCAGTATGCCGGCAGCGGGCGGCCCGGG
CGCCGGCGCGCCGGTGGATGCCTCGCCTGGCACCACCGGCGCCGGCAGCGGCACGCCCGTCACGAGCCTCGGCGGCGACA
ACGCGAACCAGATCGCCAGCGCCCTGAAGGACGCGGGCTACAACGACAACGCGATCGCCGGCATTCTCGGCAATCTGCAG
CAGGAAAGCGGCCTGCAGCCCGACATCAACCAGGGCGGCCAGACGGGCGGCCCGTCGTCGAACAACGCCGACGACAACGC
GCACGGCTACGGCCTCGCGCAGTGGGGCGGCTCGCGCGAGGAGGCGCTCGAGCAGTTCGCGCAGCAGCAGGGCAAGCCGG
TCACCGACCTCGGCACGCAGGTGCAGTTCATGATCAAGGAGGCCAACGACATGCCGGGGCTGAAGGACGCGATGAACAAC
GCGGGCTCCCCGCAGGCTGCCGCGGCGCTCTGGTGCCGGCAGTTCGAGGGCGCCACCGATCCGCAAATGCAGAACCGCAA
CCAGTACGCCGCGCAGTTCGCGCAGCAGCTGGGCGCCTGA

Upstream 100 bases:

>100_bases
CATCGCAGGCGGGCGCTTCGTGCCGCGCGCGGGCCGCTTGCGGGGGCCTCCTTATAGTGCGATGTGTCGGCAGATCCGCC
GTTCCAACCAGGAGTCGCCC

Downstream 100 bases:

>100_bases
GTCTCACCCGGTCCGGCGCGCGGGCGCCGGCATCACCGCCGGCGCCCGCGTAAACGACAACATCCCGCCGGCGGCGGGAT
GTTGCGGATGGCGGGACGGC

Product: type III effector protein HrpW

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSLMISSPSQPSGLDALSSSDPLGGANSASSTQMNQIAQIIAQLLQDIAQMSQIIQMLKQAAQQGAGSGPGGGGAAGAGG
FAPAQNLAAAPTGGGGGGSMPAAGGPGAGAPVDASPGTTGAGSGTPVTSLGGDNANQIASALKDAGYNDNAIAGILGNLQ
QESGLQPDINQGGQTGGPSSNNADDNAHGYGLAQWGGSREEALEQFAQQQGKPVTDLGTQVQFMIKEANDMPGLKDAMNN
AGSPQAAAALWCRQFEGATDPQMQNRNQYAAQFAQQLGA

Sequences:

>Translated_279_residues
MSLMISSPSQPSGLDALSSSDPLGGANSASSTQMNQIAQIIAQLLQDIAQMSQIIQMLKQAAQQGAGSGPGGGGAAGAGG
FAPAQNLAAAPTGGGGGGSMPAAGGPGAGAPVDASPGTTGAGSGTPVTSLGGDNANQIASALKDAGYNDNAIAGILGNLQ
QESGLQPDINQGGQTGGPSSNNADDNAHGYGLAQWGGSREEALEQFAQQQGKPVTDLGTQVQFMIKEANDMPGLKDAMNN
AGSPQAAAALWCRQFEGATDPQMQNRNQYAAQFAQQLGA
>Mature_278_residues
SLMISSPSQPSGLDALSSSDPLGGANSASSTQMNQIAQIIAQLLQDIAQMSQIIQMLKQAAQQGAGSGPGGGGAAGAGGF
APAQNLAAAPTGGGGGGSMPAAGGPGAGAPVDASPGTTGAGSGTPVTSLGGDNANQIASALKDAGYNDNAIAGILGNLQQ
ESGLQPDINQGGQTGGPSSNNADDNAHGYGLAQWGGSREEALEQFAQQQGKPVTDLGTQVQFMIKEANDMPGLKDAMNNA
GSPQAAAALWCRQFEGATDPQMQNRNQYAAQFAQQLGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27480; Mature: 27349

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMISSPSQPSGLDALSSSDPLGGANSASSTQMNQIAQIIAQLLQDIAQMSQIIQMLKQ
CCEECCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQQGAGSGPGGGGAAGAGGFAPAQNLAAAPTGGGGGGSMPAAGGPGAGAPVDASPGTTG
HHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGSGTPVTSLGGDNANQIASALKDAGYNDNAIAGILGNLQQESGLQPDINQGGQTGGPSS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NNADDNAHGYGLAQWGGSREEALEQFAQQQGKPVTDLGTQVQFMIKEANDMPGLKDAMNN
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCC
AGSPQAAAALWCRQFEGATDPQMQNRNQYAAQFAQQLGA
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLMISSPSQPSGLDALSSSDPLGGANSASSTQMNQIAQIIAQLLQDIAQMSQIIQMLKQ
CEECCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQQGAGSGPGGGGAAGAGGFAPAQNLAAAPTGGGGGGSMPAAGGPGAGAPVDASPGTTG
HHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGSGTPVTSLGGDNANQIASALKDAGYNDNAIAGILGNLQQESGLQPDINQGGQTGGPSS
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NNADDNAHGYGLAQWGGSREEALEQFAQQQGKPVTDLGTQVQFMIKEANDMPGLKDAMNN
CCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCC
AGSPQAAAALWCRQFEGATDPQMQNRNQYAAQFAQQLGA
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA