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The map label for this gene is hrpB3 [H]

Identifier: 238023713

GI number: 238023713

Start: 282126

End: 282968

Strand: Direct

Name: hrpB3 [H]

Synonym: bglu_2g02410

Alternate gene names: 238023713

Gene position: 282126-282968 (Clockwise)

Preceding gene: 238023712

Following gene: 238023714

Centisome position: 9.98

GC content: 71.17

Gene sequence:

>843_bases
ATGTCACAGTCACGGTCCGGATGGCGGCGCGCGTCCGTCGCGGGCGGGTTCGCGCTCTGCGCGCTGCTCGCCGGCTGCAA
GAAGGAGCTGTACGGAAACCTGTCCGAGCAGGACGTCAACGAGATGGTCGTGGCGCTGCTCGAGAACGGGGTCGACGCGT
CCAAGGAGACGCCCGACGCCGGCAAGACCTGGACGCTCGAGGTCGACGGCGACCAGATGGTGCGCGCGATGGAAGCGCTG
CGCTCGCGCGGCCTGCCCAAGAGCCGCTTCGACAATCTCGGCGACCTGTTCAAGAAGGACGGCCTCGTCTCGACGCCGAC
CGAGGAGCGCGTGCGCTTCATCTATGGCATGTCGCAGGAGCTGTCGTCGACGCTCTCGAAGATCGACGGCGTGCTGGTGG
CGCGCGTGCAGATCGTGCTGCCGAACAACGACCCGCTCGCGCAGACCATCAAGCCCTCGTCGGCGGCCGTGTTCATCAAG
TACCGGCCCAATTCCGATGTCGGCGCGCTGGTGCCGCAGATCAAGACGCTGGTGATGCACAGCGTGGAGGGGCTCACCTA
CGACCAGGTCAGCGTGACGGCCGTGGCGGCCGATCCGTCCGACCTGGCGCGCCAGCCGCTTCCGCCGCGCGGCGGCCTGC
CGGTGGTGTGGATCGTGAGCGGCGCTGCCGGGGCGATCCTGATCGTCGCGGCGGCGCTGCTGGTGGTGCTGCGCCGCCAG
CTGCCGCAAGGCGACGGCCAGGACGGCGGCGCCGCGGGCGCGGACCTCCAGGAGCCGGCCACCGGCCTGCGCGGCAGGCT
CGGCGCGCTGACCGCGCGGCTGCGCCCGCGCCCCGCGAACTGA

Upstream 100 bases:

>100_bases
GGTGGTGAACGCGTCGAAGTCGTCGATCGAAACGCTGATGAAAAACCAGTGACCGCGCGGCGCCCGCGGGCGTCGCGCGG
TCAGCCGCGGAAATTACCCC

Downstream 100 bases:

>100_bases
GCGGCCCGCCGCGAACCGCATGGCGTCTGCTGCTTTCTATCCCCCGCAGCGCGTGGCCGCCGCGCTGAACGGCTATCGCG
ACAACCTCGACAGCGCGGCC

Product: type III secretion apparatus lipoprotein SctJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSQSRSGWRRASVAGGFALCALLAGCKKELYGNLSEQDVNEMVVALLENGVDASKETPDAGKTWTLEVDGDQMVRAMEAL
RSRGLPKSRFDNLGDLFKKDGLVSTPTEERVRFIYGMSQELSSTLSKIDGVLVARVQIVLPNNDPLAQTIKPSSAAVFIK
YRPNSDVGALVPQIKTLVMHSVEGLTYDQVSVTAVAADPSDLARQPLPPRGGLPVVWIVSGAAGAILIVAAALLVVLRRQ
LPQGDGQDGGAAGADLQEPATGLRGRLGALTARLRPRPAN

Sequences:

>Translated_280_residues
MSQSRSGWRRASVAGGFALCALLAGCKKELYGNLSEQDVNEMVVALLENGVDASKETPDAGKTWTLEVDGDQMVRAMEAL
RSRGLPKSRFDNLGDLFKKDGLVSTPTEERVRFIYGMSQELSSTLSKIDGVLVARVQIVLPNNDPLAQTIKPSSAAVFIK
YRPNSDVGALVPQIKTLVMHSVEGLTYDQVSVTAVAADPSDLARQPLPPRGGLPVVWIVSGAAGAILIVAAALLVVLRRQ
LPQGDGQDGGAAGADLQEPATGLRGRLGALTARLRPRPAN
>Mature_279_residues
SQSRSGWRRASVAGGFALCALLAGCKKELYGNLSEQDVNEMVVALLENGVDASKETPDAGKTWTLEVDGDQMVRAMEALR
SRGLPKSRFDNLGDLFKKDGLVSTPTEERVRFIYGMSQELSSTLSKIDGVLVARVQIVLPNNDPLAQTIKPSSAAVFIKY
RPNSDVGALVPQIKTLVMHSVEGLTYDQVSVTAVAADPSDLARQPLPPRGGLPVVWIVSGAAGAILIVAAALLVVLRRQL
PQGDGQDGGAAGADLQEPATGLRGRLGALTARLRPRPAN

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. Could be a part of a specific transport apparatus or a secretion apparatus that is required for pathogenicity. Hrp proteins may form a complex (tu

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 29677; Mature: 29546

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSRSGWRRASVAGGFALCALLAGCKKELYGNLSEQDVNEMVVALLENGVDASKETPDA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
GKTWTLEVDGDQMVRAMEALRSRGLPKSRFDNLGDLFKKDGLVSTPTEERVRFIYGMSQE
CCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
LSSTLSKIDGVLVARVQIVLPNNDPLAQTIKPSSAAVFIKYRPNSDVGALVPQIKTLVMH
HHHHHHHHCCEEEEEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
SVEGLTYDQVSVTAVAADPSDLARQPLPPRGGLPVVWIVSGAAGAILIVAAALLVVLRRQ
HHCCCEECCEEEEEEECCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
LPQGDGQDGGAAGADLQEPATGLRGRLGALTARLRPRPAN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQSRSGWRRASVAGGFALCALLAGCKKELYGNLSEQDVNEMVVALLENGVDASKETPDA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
GKTWTLEVDGDQMVRAMEALRSRGLPKSRFDNLGDLFKKDGLVSTPTEERVRFIYGMSQE
CCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
LSSTLSKIDGVLVARVQIVLPNNDPLAQTIKPSSAAVFIKYRPNSDVGALVPQIKTLVMH
HHHHHHHHCCEEEEEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
SVEGLTYDQVSVTAVAADPSDLARQPLPPRGGLPVVWIVSGAAGAILIVAAALLVVLRRQ
HHCCCEECCEEEEEEECCHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
LPQGDGQDGGAAGADLQEPATGLRGRLGALTARLRPRPAN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]