| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023712
Identifier: 238023712
GI number: 238023712
Start: 281691
End: 282077
Strand: Direct
Name: 238023712
Synonym: bglu_2g02400
Alternate gene names: NA
Gene position: 281691-282077 (Clockwise)
Preceding gene: 238023711
Following gene: 238023713
Centisome position: 9.96
GC content: 65.89
Gene sequence:
>387_bases ATGACCGCCATCGACCATTCCGCGGCGCTGCGCGCGTCGCTCGAGGCCCTCTCGAAGCCGGAAGCCGCGAGCGGTTCGCC CGCCGCGGCCGACAAGTTCAAGGCGCTGATGGAAAAGCCCTCGATGGCGCCGCCGCATGCCGAGCAGAGCCATTCGCTGG AAGTCGCCTCGAAGCTGGTGGCCGCGCAGGACGCGGAGCTGCAGCGCAGCGTCACCGACGCGGCCGAATTCATGCAGCGC GCCCCCGAGATGAGCCTCAACGAGATGAACGCCGGCTCGATCCGCCTCACCTACGAACTGGCCAGCACGCAGCTCGACAT GGAAGCGAAGATGGGGGTGGTGAACGCGTCGAAGTCGTCGATCGAAACGCTGATGAAAAACCAGTGA
Upstream 100 bases:
>100_bases GCGCCGGTCGGCCAGCCGCCGTCGGCCGGCATCGAATCGCTGCCGTTCGGCGTCGCGCTGCGCGCCTGAGCGAGCTTTCT TCCCCGCACGGAGAACGCCG
Downstream 100 bases:
>100_bases CCGCGCGGCGCCCGCGGGCGTCGCGCGGTCAGCCGCGGAAATTACCCCATGTCACAGTCACGGTCCGGATGGCGGCGCGC GTCCGTCGCGGGCGGGTTCG
Product: type III secretion protein HrpB2
Products: NA
Alternate protein names: Type III Secretion Protein; Type III Secretion; Type III Secretion Protein HrpB
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTAIDHSAALRASLEALSKPEAASGSPAAADKFKALMEKPSMAPPHAEQSHSLEVASKLVAAQDAELQRSVTDAAEFMQR APEMSLNEMNAGSIRLTYELASTQLDMEAKMGVVNASKSSIETLMKNQ
Sequences:
>Translated_128_residues MTAIDHSAALRASLEALSKPEAASGSPAAADKFKALMEKPSMAPPHAEQSHSLEVASKLVAAQDAELQRSVTDAAEFMQR APEMSLNEMNAGSIRLTYELASTQLDMEAKMGVVNASKSSIETLMKNQ >Mature_127_residues TAIDHSAALRASLEALSKPEAASGSPAAADKFKALMEKPSMAPPHAEQSHSLEVASKLVAAQDAELQRSVTDAAEFMQRA PEMSLNEMNAGSIRLTYELASTQLDMEAKMGVVNASKSSIETLMKNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13620; Mature: 13488
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIDHSAALRASLEALSKPEAASGSPAAADKFKALMEKPSMAPPHAEQSHSLEVASKLV CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AAQDAELQRSVTDAAEFMQRAPEMSLNEMNAGSIRLTYELASTQLDMEAKMGVVNASKSS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHCHHHHCCCCCCCHHH IETLMKNQ HHHHHCCC >Mature Secondary Structure TAIDHSAALRASLEALSKPEAASGSPAAADKFKALMEKPSMAPPHAEQSHSLEVASKLV CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AAQDAELQRSVTDAAEFMQRAPEMSLNEMNAGSIRLTYELASTQLDMEAKMGVVNASKSS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHCHHHHCCCCCCCHHH IETLMKNQ HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA