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The map label for this gene is hrcV [H]

Identifier: 238023709

GI number: 238023709

Start: 277439

End: 279544

Strand: Reverse

Name: hrcV [H]

Synonym: bglu_2g02370

Alternate gene names: 238023709

Gene position: 279544-277439 (Counterclockwise)

Preceding gene: 238023710

Following gene: 238023708

Centisome position: 9.89

GC content: 69.61

Gene sequence:

>2106_bases
ATGCTGAAGTCCCTGAAACTCCCCGCCGGCGGCGAAATCGGCATTGTCGCGCTGGTGGTGGCGATCATCTCGCTGATGAT
CCTGCCGCTGCCGCCGCTGCTGATCGACATGCTGCTCGGCCTGAACATCACCATCAGCGTGACGCTGCTGATGATCACCA
TGTACGTGCCCGACATCTCGGCGCTCTCGGCGTTCCCGTCGCTGCTGCTGTTCACCACGCTGTTCCGGCTCTCGCTGAAC
ATCGCCTCCACCAAGTCGATCCTGCTGCACGCCGAGGCCGGCAACATCATCGAGAGCTTCGGCAAGCTGGTGGTGGGCGG
CAACCTGGTGGTGGGCCTGGTGGTGTTCGCGATCATCACCACCGTGCAGTTCATCGTGATCGCCAAGGGTTCGGAGCGGG
TGGCCGAGGTGGGCGCGCGCTTCACGCTCGACGCGCTGCCCGGCAAGCAGATGAGCATCGACGCGGACCTGCGCGCGAAC
CTGCTCACGCCGGAGGAGGCCAAGCGCAAGCGCGCCACGCTGGCGGTGGAAAGCCAGCTGCACGGCGGCATGGACGGGGC
GATGAAGTTCGTGAAGGGCGACGCGATCGCGGGCCTCATCATCACGATGATCAACATCCTGGCGGGCATCGCGGTGGGCG
TGGCCTACCACGGCATGTCGGCCGGCGACGCGGCGAACCGCTTCTCGGTGCTGTCGGTCGGTGACGCGATGGTCTCGCAG
ATCCCGTCGCTGCTGCTGTCGGTGGCCGCCGGCGTGATGATCACGCGGGTGGCCGACGAGCGCCAGGCCAAGCAGCGTTC
GCTCGGCGACGAGATCGGCCACCAGCTCGGCTCGAGCAGCCGCGCGCTGTTCTTCGCCGCGGTGCTGCTGCTGGGCTTCG
CGATCGTGCCGGGCTTCCCGTCGCTGCTGTTCGTGCTGCTGGCCGCGGCGCTGTCGTTCGCGGGCTACCGGCTGTCGGTC
AGGAAGCCCTCGTCGCGCGACAGCGAGCATGGCGGCGCCGAGACGCTCGCCTCGATGCAGCGCGTGGGCGCCAAGACCGA
GGTGCCGCCGATCCTGCCGCGCGCGCCGCAGTTCGCCTGCGCGGTGGGCGTGCGGATCTCGCCCGACCTGGCCGCGAAGC
TGGCCATGCCCACCCTCGACGCCGCCTTCGAGGCCGAGCGCGCGGCGCTGCAGGAGGCGCTCGGGCTGCCGTTCCCCGGC
ATCACGATGTGGGTCCACGCGCCGCTGCCGGTCGCCACCTTCGAGATCCTGATCCACGACGTGCCGCATCTGATGGTGAC
GATGCCGCCCGGCAAGGCGATGCTGCCCGACCTGCGCCTGGTGCCGGCCGAGGTCGCGGCGGCCTCGGCCGAGAAGCTGC
TGGCGCTGGCCGAGAAGGCCGAGGACGGCCCGCCGGTCGATTCGGCCGGCACGCCCACGCGCTGGATCGACGAGCGCGCG
GTGCCGGCCAAGACGCCGGTGTGGCGCACCGAGCAGATCATCGCGCACGCCTGCGTGGCCGCCATGCGGCGCCACGCGAC
GCTGTTTCTCGGCATCCAGGAGGTGCAGTGGATTCTCGACCAGCTCAGCCATGACGCGCCGGGCCTGGTGGCCGAGGTGC
AGAAGGTGCTGCCGCCGCAGCGGATCGCCGACGTGCTGCGCCGGCTGCTGGAGGAACAGGTGTCGATCCGCAACGTGCGC
TCGATCATGGAGAGCCTGATCGCCTGGGGCGCCAAGGAAAAGGACATGCTGATGCTCACCGAGTACGTGCGCGGCGATCT
CTCGCGCTTCCTCGCGCACCGCGCCGCCAAGGGCGAGCGGCAGCTCTCGGCGGTGCTGTTCGACATGCAGGCCGAGCAGC
ACATCCGCGCCGCGATCAAGCAGACGCCGACCGGCAACTTCCTCGCGCTGCCGCCCAACGACGCCGCGTTCCTGATCGAC
CGGATCCAGTCGTTCGTCGGCGCCGCGCCGCGCGAGGGCGTGGTGCTGGTCACCTCGATGGACATCCGCCGCTACGTGCG
GCGCATGATCGAGTCGCGGCTCGGCTGGCTGTCGGTCTATTCGTACCAGGAACTGGGCGAGCACGTCGAGCTCAAGCCCG
TCGGCCGCGTGACGCTGAGCGCATGA

Upstream 100 bases:

>100_bases
CGCGCTGTTCGAGACCATCGCCGCGATCCTGCGCTGGGTCGACTCGATCGGCGCGGCCCGCCGCGACACGCAACACTGAC
CGCCGAGAGCCGGAGCCACG

Downstream 100 bases:

>100_bases
CGGCCATCGATTCGCGCACCGCGCGCGTGATCCCCGGCACCGCCGCCGACGAGCCGGGCGGCGCGCGCGAGCGGCGCTTC
GACTACGCGTCGCTGGCCGC

Product: type III secretion protein SctV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MLKSLKLPAGGEIGIVALVVAIISLMILPLPPLLIDMLLGLNITISVTLLMITMYVPDISALSAFPSLLLFTTLFRLSLN
IASTKSILLHAEAGNIIESFGKLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN
LLTPEEAKRKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINILAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
IPSLLLSVAAGVMITRVADERQAKQRSLGDEIGHQLGSSSRALFFAAVLLLGFAIVPGFPSLLFVLLAAALSFAGYRLSV
RKPSSRDSEHGGAETLASMQRVGAKTEVPPILPRAPQFACAVGVRISPDLAAKLAMPTLDAAFEAERAALQEALGLPFPG
ITMWVHAPLPVATFEILIHDVPHLMVTMPPGKAMLPDLRLVPAEVAAASAEKLLALAEKAEDGPPVDSAGTPTRWIDERA
VPAKTPVWRTEQIIAHACVAAMRRHATLFLGIQEVQWILDQLSHDAPGLVAEVQKVLPPQRIADVLRRLLEEQVSIRNVR
SIMESLIAWGAKEKDMLMLTEYVRGDLSRFLAHRAAKGERQLSAVLFDMQAEQHIRAAIKQTPTGNFLALPPNDAAFLID
RIQSFVGAAPREGVVLVTSMDIRRYVRRMIESRLGWLSVYSYQELGEHVELKPVGRVTLSA

Sequences:

>Translated_701_residues
MLKSLKLPAGGEIGIVALVVAIISLMILPLPPLLIDMLLGLNITISVTLLMITMYVPDISALSAFPSLLLFTTLFRLSLN
IASTKSILLHAEAGNIIESFGKLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN
LLTPEEAKRKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINILAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
IPSLLLSVAAGVMITRVADERQAKQRSLGDEIGHQLGSSSRALFFAAVLLLGFAIVPGFPSLLFVLLAAALSFAGYRLSV
RKPSSRDSEHGGAETLASMQRVGAKTEVPPILPRAPQFACAVGVRISPDLAAKLAMPTLDAAFEAERAALQEALGLPFPG
ITMWVHAPLPVATFEILIHDVPHLMVTMPPGKAMLPDLRLVPAEVAAASAEKLLALAEKAEDGPPVDSAGTPTRWIDERA
VPAKTPVWRTEQIIAHACVAAMRRHATLFLGIQEVQWILDQLSHDAPGLVAEVQKVLPPQRIADVLRRLLEEQVSIRNVR
SIMESLIAWGAKEKDMLMLTEYVRGDLSRFLAHRAAKGERQLSAVLFDMQAEQHIRAAIKQTPTGNFLALPPNDAAFLID
RIQSFVGAAPREGVVLVTSMDIRRYVRRMIESRLGWLSVYSYQELGEHVELKPVGRVTLSA
>Mature_701_residues
MLKSLKLPAGGEIGIVALVVAIISLMILPLPPLLIDMLLGLNITISVTLLMITMYVPDISALSAFPSLLLFTTLFRLSLN
IASTKSILLHAEAGNIIESFGKLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN
LLTPEEAKRKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINILAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
IPSLLLSVAAGVMITRVADERQAKQRSLGDEIGHQLGSSSRALFFAAVLLLGFAIVPGFPSLLFVLLAAALSFAGYRLSV
RKPSSRDSEHGGAETLASMQRVGAKTEVPPILPRAPQFACAVGVRISPDLAAKLAMPTLDAAFEAERAALQEALGLPFPG
ITMWVHAPLPVATFEILIHDVPHLMVTMPPGKAMLPDLRLVPAEVAAASAEKLLALAEKAEDGPPVDSAGTPTRWIDERA
VPAKTPVWRTEQIIAHACVAAMRRHATLFLGIQEVQWILDQLSHDAPGLVAEVQKVLPPQRIADVLRRLLEEQVSIRNVR
SIMESLIAWGAKEKDMLMLTEYVRGDLSRFLAHRAAKGERQLSAVLFDMQAEQHIRAAIKQTPTGNFLALPPNDAAFLID
RIQSFVGAAPREGVVLVTSMDIRRYVRRMIESRLGWLSVYSYQELGEHVELKPVGRVTLSA

Specific function: Involved in the secretion of popA, a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=695, Percent_Identity=32.9496402877698, Blast_Score=301, Evalue=8e-83,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 75274; Mature: 75274

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSLKLPAGGEIGIVALVVAIISLMILPLPPLLIDMLLGLNITISVTLLMITMYVPDIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
ALSAFPSLLLFTTLFRLSLNIASTKSILLHAEAGNIIESFGKLVVGGNLVVGLVVFAIIT
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCEEECCHHHHHHHHHHHHH
TVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRANLLTPEEAKRKRATLAVESQL
HHHHHEEECCCHHHHHHCCCEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
HGGMDGAMKFVKGDAIAGLIITMINILAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
IPSLLLSVAAGVMITRVADERQAKQRSLGDEIGHQLGSSSRALFFAAVLLLGFAIVPGFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH
SLLFVLLAAALSFAGYRLSVRKPSSRDSEHGGAETLASMQRVGAKTEVPPILPRAPQFAC
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
AVGVRISPDLAAKLAMPTLDAAFEAERAALQEALGLPFPGITMWVHAPLPVATFEILIHD
EECCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHC
VPHLMVTMPPGKAMLPDLRLVPAEVAAASAEKLLALAEKAEDGPPVDSAGTPTRWIDERA
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
VPAKTPVWRTEQIIAHACVAAMRRHATLFLGIQEVQWILDQLSHDAPGLVAEVQKVLPPQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCHH
RIADVLRRLLEEQVSIRNVRSIMESLIAWGAKEKDMLMLTEYVRGDLSRFLAHRAAKGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
QLSAVLFDMQAEQHIRAAIKQTPTGNFLALPPNDAAFLIDRIQSFVGAAPREGVVLVTSM
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECH
DIRRYVRRMIESRLGWLSVYSYQELGEHVELKPVGRVTLSA
HHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCEEECC
>Mature Secondary Structure
MLKSLKLPAGGEIGIVALVVAIISLMILPLPPLLIDMLLGLNITISVTLLMITMYVPDIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
ALSAFPSLLLFTTLFRLSLNIASTKSILLHAEAGNIIESFGKLVVGGNLVVGLVVFAIIT
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCEEECCHHHHHHHHHHHHH
TVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRANLLTPEEAKRKRATLAVESQL
HHHHHEEECCCHHHHHHCCCEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
HGGMDGAMKFVKGDAIAGLIITMINILAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQ
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
IPSLLLSVAAGVMITRVADERQAKQRSLGDEIGHQLGSSSRALFFAAVLLLGFAIVPGFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH
SLLFVLLAAALSFAGYRLSVRKPSSRDSEHGGAETLASMQRVGAKTEVPPILPRAPQFAC
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH
AVGVRISPDLAAKLAMPTLDAAFEAERAALQEALGLPFPGITMWVHAPLPVATFEILIHD
EECCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHC
VPHLMVTMPPGKAMLPDLRLVPAEVAAASAEKLLALAEKAEDGPPVDSAGTPTRWIDERA
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
VPAKTPVWRTEQIIAHACVAAMRRHATLFLGIQEVQWILDQLSHDAPGLVAEVQKVLPPQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCHH
RIADVLRRLLEEQVSIRNVRSIMESLIAWGAKEKDMLMLTEYVRGDLSRFLAHRAAKGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
QLSAVLFDMQAEQHIRAAIKQTPTGNFLALPPNDAAFLIDRIQSFVGAAPREGVVLVTSM
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECH
DIRRYVRRMIESRLGWLSVYSYQELGEHVELKPVGRVTLSA
HHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8316211; 11823852 [H]