Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023689

Identifier: 238023689

GI number: 238023689

Start: 247532

End: 249883

Strand: Direct

Name: 238023689

Synonym: bglu_2g02140

Alternate gene names: NA

Gene position: 247532-249883 (Clockwise)

Preceding gene: 238023688

Following gene: 238023690

Centisome position: 8.75

GC content: 62.8

Gene sequence:

>2352_bases
ATGTCGTCGATCCTGCCTACCCAGGCCTACGAGTTGAAGCTCGCACCGCATCCGGCGCCGTTCTCGGTGCTCGAGTTCAG
CGGCCGGGACGCCGTGAGCGAGCTGTATCACTACGACATCGAGTTCACCAGCCCGGCAGCGGGCATCCCGATGGAGCAGG
TGGTCGGCCGGCCCGCGAGATTCACCATCGCTCCGATTGACCCGAACATGGGCTACCTGCGCAAGATGTTCGGTGAGAAC
GCGGAGCAGTTCAGCAAGATGCCGCCCGCGCACACCATCCACGGCATCATCACGGAATTCGATGAATTCGCCACGACGGC
CGACCAGACGCACTACCGGGTGCGGCTCGAGCCGGTGCTCGCCGACCTGCACCGGGGCGTGACGAGCCGGCTGTTCCAGA
AGCAGTCGATCGAGGAAATCGTGACCGACACGCTGCGCCATTACGGCTACCGCGTCGGCGTCGACTTCGTGTTCCAACTG
CGCCACCAGTACAAGCGGCACGAATACGTGACGCAGTACCACGAGACCACGTTTGCCTTCATCCAGCGCCTCTGTGCGCA
GGAGGGCATCTGGTTCCGCTGGGAGCAGAAGAAGGATCACGCGGTGATCGTGTTCGGCGACGATCTCGATGCCTATGCAC
GCAAACAGCGCACGGTGCCTTACCTGCGAGACGCCGGACTCGAGAGCTCAGGCGCGGACACGATCAAGACGCTAGAAAAG
CGGACCCGGCGCGTACCCGAAGCCGTGCGGTTGCACGACTACAACCATCGCGAGGCGGGCGTATCGCTGCTCGTCGAGGA
AAACGCCGCGCGTGCCGACAAGTCGACGAACGGTGTCGACTACCGCTGGGGCGAGCATTACGAAACGCCGGAGGAGGGCA
GGCAGATCGCCCGCCGGCGCCATGAGGCGTATCTGGCGAACCAGATCACCTTCAAGGGCACCGGCAATCCGTTCTGGCTG
GAGGCGGGCGAAGTCATGCGTGTCGAGCCGGTCCAGGCCGACGCGAAGCACGGGATCTTCATCACCGCGGTGGAATCGAG
CGGCGGCCGTAGCCAATCGTACTGGGTGAGCTTCGAGGGGATTCCGTCCGATCGCGCGTATCGAACGCCGATCGCCTCGA
TCAAGCGACCGGCCATTGACGGCATCCTGCCGGCCCGCATTACATCGCCGGGCAACTACAAATACGCGTACCTGACCGAG
CAGGGCTGGTATGTGATCAAGCTGCCGTTCGATCTCGACGAGTGGAGTCCGGGCGGTACGAGCCGGCCGGTGCGGTTTGC
CAAGCCGTACAGTGGGGACAGCTACGGGCACCACTTCCCGCTGATCGACGGGGCGGAAGTCGCCATCGTCTTTACCGATG
GCAATCCGGACCGGCCCGTGATCATCGGGGCCATGCACGACAGCCTGCATCCGGATCTCGTCAATAACCTCAATCACACC
CGCAACATCGTTCGCACCGCCGCACAGAACGAGCTGCGGATGGAGGATAAGGAAAACGTCGAGCACATCCACCTGACGAC
GCCGTTCCAGACCAGTGAGCTCAATCTCGGGCACATGGTCGATGGGGACCGCAAGGAACGCGGACAGGGGGCTGAATTGC
GTACCGACGGGCATCTGACGGCACGCGGGCCGCGGGGTATGCTGCTGACCACCGAAGCTCAGACCGGTGCATCGGGACAT
CAGCTCGACATGAAAGGAGCCCAGGAGCAGTTGCAGCGGGCGATCGAACGTATGGAGTCCCTGACCCAGGCGGTCCAGGC
GGCGGAAGCCACGGTAGCCGAACTGCAGAAGCAGAAAGCGCTCTATACGGAAGCGCTTGATGGCCTGAAGCGGGCAGCCA
TTCTCGTGAGCGCTCCATCGGGCATCGGACTCACGTCAGGTGAGCATCTGCAGGTCAACGCTGACCAGAACCTCATCGCC
ACTGCGGGCGGAAACTTCGATGTCGGGACCATGCGGAATTTTACTGTGGCGGCTGGTCGCCAGGTAGCGCTTTTCGCGCA
GGCGCAAGGTATGAGACTCATTGCCGCAAAGCAGGACGTGATCATGCAAGCCCGCACTGGCGCCATGGCGCTGTCTGCAT
CGAAGGACCTGCATTTCAACAGCGTTGACGGATCGATCGTCGCAGCGTCCCGCGGTGCATTGACGCTGACCAGTCGTGGA
GCCTACATCAAGATTGACGGAGGCAACATCGAACTGGGCTGCCCCGGCGACATCACGCTCAAGTGTGGGAACTTTCACTG
GACCGGACCGGGCAATCTGTCCGTTCCCCTACCGGCAATGCCGATCGGGCCGTGCAAGGAATGCCTGCTGGACGCTCACC
GCGGTGTCGAAGCGATGACGGAGGTCGCATGA

Upstream 100 bases:

>100_bases
TAAGCCGCGCTGATCCGCCCAGTTCAGTGCATCAGCCGCCGGGGCCATGAAGGCTCCGGCGGTGCGGTTCGTATTTGTGC
CTGCTCAACGGAGTTTCCGC

Downstream 100 bases:

>100_bases
TGTCTGAGCCCACGAGCCCGACTTCGGCCCAGGAAGTGGAGTCTGCCTGGGAAAACTGGCGCGAGCGTCTGCTGGCGCAG
TTCGAAATTCATTCGGACGA

Product: type VI secretion system Vgr family protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; VgrG Protein; Vgr-Related Protein; VGR-Like Protein; Rhs Accessory Genetic Element; Rhs-Family Protein; Vgr Related Protein; Rhs Family Protein; RHS Accessory Genetic Element; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Protein VgrE; VrgG Protein; Rhs Element Vgr Related Protein

Number of amino acids: Translated: 783; Mature: 782

Protein sequence:

>783_residues
MSSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPARFTIAPIDPNMGYLRKMFGEN
AEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVLADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQL
RHQYKRHEYVTQYHETTFAFIQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRRHEAYLANQITFKGTGNPFWL
EAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEGIPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTE
QGWYVIKLPFDLDEWSPGGTSRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDGHLTARGPRGMLLTTEAQTGASGH
QLDMKGAQEQLQRAIERMESLTQAVQAAEATVAELQKQKALYTEALDGLKRAAILVSAPSGIGLTSGEHLQVNADQNLIA
TAGGNFDVGTMRNFTVAAGRQVALFAQAQGMRLIAAKQDVIMQARTGAMALSASKDLHFNSVDGSIVAASRGALTLTSRG
AYIKIDGGNIELGCPGDITLKCGNFHWTGPGNLSVPLPAMPIGPCKECLLDAHRGVEAMTEVA

Sequences:

>Translated_783_residues
MSSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPARFTIAPIDPNMGYLRKMFGEN
AEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVLADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQL
RHQYKRHEYVTQYHETTFAFIQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRRHEAYLANQITFKGTGNPFWL
EAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEGIPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTE
QGWYVIKLPFDLDEWSPGGTSRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDGHLTARGPRGMLLTTEAQTGASGH
QLDMKGAQEQLQRAIERMESLTQAVQAAEATVAELQKQKALYTEALDGLKRAAILVSAPSGIGLTSGEHLQVNADQNLIA
TAGGNFDVGTMRNFTVAAGRQVALFAQAQGMRLIAAKQDVIMQARTGAMALSASKDLHFNSVDGSIVAASRGALTLTSRG
AYIKIDGGNIELGCPGDITLKCGNFHWTGPGNLSVPLPAMPIGPCKECLLDAHRGVEAMTEVA
>Mature_782_residues
SSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPARFTIAPIDPNMGYLRKMFGENA
EQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVLADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQLR
HQYKRHEYVTQYHETTFAFIQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEKR
TRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRRHEAYLANQITFKGTGNPFWLE
AGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEGIPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTEQ
GWYVIKLPFDLDEWSPGGTSRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHTR
NIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDGHLTARGPRGMLLTTEAQTGASGHQ
LDMKGAQEQLQRAIERMESLTQAVQAAEATVAELQKQKALYTEALDGLKRAAILVSAPSGIGLTSGEHLQVNADQNLIAT
AGGNFDVGTMRNFTVAAGRQVALFAQAQGMRLIAAKQDVIMQARTGAMALSASKDLHFNSVDGSIVAASRGALTLTSRGA
YIKIDGGNIELGCPGDITLKCGNFHWTGPGNLSVPLPAMPIGPCKECLLDAHRGVEAMTEVA

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86766; Mature: 86635

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPAR
CCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHEECEEECCCCCCCCHHHHCCCCCE
FTIAPIDPNMGYLRKMFGENAEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVL
EEEEECCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
ADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQLRHQYKRHEYVTQYHETTFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
HHHHHHCCCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHH
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRR
HHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HEAYLANQITFKGTGNPFWLEAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEG
HHHHHHHCEEEECCCCEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEC
IPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTEQGWYVIKLPFDLDEWSPGGT
CCCCCCCCCCHHHHCCCCCCCCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCC
SRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
CCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHH
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDGHLT
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCEECCCEEE
ARGPRGMLLTTEAQTGASGHQLDMKGAQEQLQRAIERMESLTQAVQAAEATVAELQKQKA
ECCCCCEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYTEALDGLKRAAILVSAPSGIGLTSGEHLQVNADQNLIATAGGNFDVGTMRNFTVAAGR
HHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEECCC
QVALFAQAQGMRLIAAKQDVIMQARTGAMALSASKDLHFNSVDGSIVAASRGALTLTSRG
EEEEEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEECCCCEEEEECCCEEEEECCC
AYIKIDGGNIELGCPGDITLKCGNFHWTGPGNLSVPLPAMPIGPCKECLLDAHRGVEAMT
CEEEEECCEEEEECCCCEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHH
EVA
HCC
>Mature Secondary Structure 
SSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPAR
CCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHEECEEECCCCCCCCHHHHCCCCCE
FTIAPIDPNMGYLRKMFGENAEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVL
EEEEECCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
ADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQLRHQYKRHEYVTQYHETTFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
HHHHHHCCCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHH
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRR
HHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HEAYLANQITFKGTGNPFWLEAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEG
HHHHHHHCEEEECCCCEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEC
IPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTEQGWYVIKLPFDLDEWSPGGT
CCCCCCCCCCHHHHCCCCCCCCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCC
SRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
CCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHH
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDGHLT
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCEECCCEEE
ARGPRGMLLTTEAQTGASGHQLDMKGAQEQLQRAIERMESLTQAVQAAEATVAELQKQKA
ECCCCCEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYTEALDGLKRAAILVSAPSGIGLTSGEHLQVNADQNLIATAGGNFDVGTMRNFTVAAGR
HHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEECCC
QVALFAQAQGMRLIAAKQDVIMQARTGAMALSASKDLHFNSVDGSIVAASRGALTLTSRG
EEEEEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEECCCCEEEEECCCEEEEECCC
AYIKIDGGNIELGCPGDITLKCGNFHWTGPGNLSVPLPAMPIGPCKECLLDAHRGVEAMT
CEEEEECCEEEEECCCCEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHH
EVA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA