Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023688

Identifier: 238023688

GI number: 238023688

Start: 245902

End: 247434

Strand: Direct

Name: 238023688

Synonym: bglu_2g02130

Alternate gene names: NA

Gene position: 245902-247434 (Clockwise)

Preceding gene: 238023687

Following gene: 238023689

Centisome position: 8.7

GC content: 63.08

Gene sequence:

>1533_bases
ATGAAGCAGAATGAATCCCGTCAGGGTGTGAACGAAACCGTCGTGCTGGAAAACGACAGCGTGTATGCCTCGCTCTGCAG
CAAGATCAACCTCACGCCGGTCGCCGAGGCGCGTCCGCTCGAGGCCTTCCGCGACAACGACATGCTCTCCGAAGCGTCAG
CCGACGAGCGTATCGCGCGCGGCATGAGCGCCTTCCTGGATCTGATCGCGCAGTCGAGCCAGCCGGTCGAGCGCCTCGAC
AAATCGCTGCTGGACTTCCATATCGGCCAGCTCGACCGCCAGATCAGCCGCCAGCTCGACGCCGTGATGCACACGCCGGC
GTTCCAGGCGCTCGAGGGGCGCTGGCGCGGTCTCAAGTTGCTCGTCGCGCGCACGGACTTTCGCAAGAACGCGAAGATCG
AGGTGCTCGACGTGTCGAAGGAGGCGCTGCAGCGCGACTTCGAGGACACGCCGGAACTGATCCAGAGCGGCCTGTATCGC
CTCACCTACATCGAGGAGTACGACACGCCGGGCGGCCAGCCGATCAGCGCGATGATCAGCGACTTCGAGTTCACGAACTC
GCCGATGGACGTGGCGCTGCTGCGTAACATCTCGAAGGTGGCGGCGGCGGCCCACATGCCGTTCATCGGCTCGGTGGGCG
CAGCATTCTTCGGCAAGCAGTCGATGGAAGAGGTGGCGGCCATTCAGGACATCGGCAACTACTTCGACCGCGCCGAGTAC
ATCAAATGGAAGAGCTTCCGTGAAACCGATGACGCCCGTTATGTCGGCCTGACGATGCCGCGCGTGCTCGGCCGCCTGCC
GTATGGCAAGGACACCACGCCGGTGCGTGCCTTCAATTACGAGGAGGCGGTGAAGGGCCCGGACCACGACCGGTACCTGT
GGGTCAACGCGTCGTTCGCGTTCGCGGCCAATATGGTGCGCAGCTTCGTGAACAACGGCTGGTGCGTGCAGATTCGCGGC
CCGCAGGCGGGCGGCAAGGTGGAGGACCTGCCGGTGCATCTGTATGACCTGGGCACCGGCGTGCAGCCGAAGATCCCGAC
CGAGGTGCTGATCCCCGAGACACGCGAGTTCGAGTTCGCGAATCTCGGCTTCATCCCGCTGTCGTTCTACAAGAACCACG
ACTTCGCGTGCTTCTTCTCGGCCAGCTCGACGCAGAAGCCGGCGTTGTACGAGACCAAGGAGGCGACGGCCAACAGCCGC
ATCAACGCGCGCCTGCCTTACATCTTCCTGCTGTCGCGCATCGCGCATTACCTGAAGCTGATCCAGCGCGAGAACATCGG
CACGACCAAGGACCGGCGTCTGCTCGAGCTCGAGCTGAACAACTGGATCAAGGGGCTCGTGACCGAGATGAAGGATCCGG
ACGACGAACTGCAGGCCTCGCATCCGCTGCGCGACGCGAAGGTCACGGTCGAGGACATCGATGACAACCCGGGCTTCTTC
CGCATCAAGCTCTTCATCATTCCGCACTTCCAGGTGGAGGGGATGGACATCGGCCTGTCGCTGGTTTCGCAGATGCCCAA
GGCCAAGAGTTAA

Upstream 100 bases:

>100_bases
GCGCAGCGAGCTCGCGCAGGTCGCCACCGCAGCCACCCAACCGGAAGGTCAGGCCTGAACGTGGTCCCAGGTATCCATAC
GAACGCAGACAGGACAAGCA

Downstream 100 bases:

>100_bases
GCCGCGCTGATCCGCCCAGTTCAGTGCATCAGCCGCCGGGGCCATGAAGGCTCCGGCGGTGCGGTTCGTATTTGTGCCTG
CTCAACGGAGTTTCCGCATG

Product: EvpB family type VI secretion protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKQNESRQGVNETVVLENDSVYASLCSKINLTPVAEARPLEAFRDNDMLSEASADERIARGMSAFLDLIAQSSQPVERLD
KSLLDFHIGQLDRQISRQLDAVMHTPAFQALEGRWRGLKLLVARTDFRKNAKIEVLDVSKEALQRDFEDTPELIQSGLYR
LTYIEEYDTPGGQPISAMISDFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKQSMEEVAAIQDIGNYFDRAEY
IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFAFAANMVRSFVNNGWCVQIRG
PQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFANLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSR
INARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIKGLVTEMKDPDDELQASHPLRDAKVTVEDIDDNPGFF
RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS

Sequences:

>Translated_510_residues
MKQNESRQGVNETVVLENDSVYASLCSKINLTPVAEARPLEAFRDNDMLSEASADERIARGMSAFLDLIAQSSQPVERLD
KSLLDFHIGQLDRQISRQLDAVMHTPAFQALEGRWRGLKLLVARTDFRKNAKIEVLDVSKEALQRDFEDTPELIQSGLYR
LTYIEEYDTPGGQPISAMISDFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKQSMEEVAAIQDIGNYFDRAEY
IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFAFAANMVRSFVNNGWCVQIRG
PQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFANLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSR
INARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIKGLVTEMKDPDDELQASHPLRDAKVTVEDIDDNPGFF
RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS
>Mature_510_residues
MKQNESRQGVNETVVLENDSVYASLCSKINLTPVAEARPLEAFRDNDMLSEASADERIARGMSAFLDLIAQSSQPVERLD
KSLLDFHIGQLDRQISRQLDAVMHTPAFQALEGRWRGLKLLVARTDFRKNAKIEVLDVSKEALQRDFEDTPELIQSGLYR
LTYIEEYDTPGGQPISAMISDFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKQSMEEVAAIQDIGNYFDRAEY
IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFAFAANMVRSFVNNGWCVQIRG
PQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFANLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSR
INARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIKGLVTEMKDPDDELQASHPLRDAKVTVEDIDDNPGFF
RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57623; Mature: 57623

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNESRQGVNETVVLENDSVYASLCSKINLTPVAEARPLEAFRDNDMLSEASADERIAR
CCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCHHHHHHH
GMSAFLDLIAQSSQPVERLDKSLLDFHIGQLDRQISRQLDAVMHTPAFQALEGRWRGLKL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
LVARTDFRKNAKIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS
EEEECCCCCCCEEEEEECCHHHHHCCCCCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHH
DFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKQSMEEVAAIQDIGNYFDRAEY
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFA
HHHCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEECHHHHCCCCCCCCEEEEECHHH
FAANMVRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCEE
NLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSRINARLPYIFLLSRIAHYLKL
CCCCEEEEEECCCCEEEEEECCCCCCCCCEECHHHCCCCCCCCCCHHHHHHHHHHHHHHH
IQRENIGTTKDRRLLELELNNWIKGLVTEMKDPDDELQASHPLRDAKVTVEDIDDNPGFF
HHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEECCCCCCEE
RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS
EEEEEEEECEEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQNESRQGVNETVVLENDSVYASLCSKINLTPVAEARPLEAFRDNDMLSEASADERIAR
CCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCHHHHHHH
GMSAFLDLIAQSSQPVERLDKSLLDFHIGQLDRQISRQLDAVMHTPAFQALEGRWRGLKL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
LVARTDFRKNAKIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS
EEEECCCCCCCEEEEEECCHHHHHCCCCCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHH
DFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKQSMEEVAAIQDIGNYFDRAEY
HHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFA
HHHCCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCEEEECHHHHCCCCCCCCEEEEECHHH
FAANMVRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCEE
NLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSRINARLPYIFLLSRIAHYLKL
CCCCEEEEEECCCCEEEEEECCCCCCCCCEECHHHCCCCCCCCCCHHHHHHHHHHHHHHH
IQRENIGTTKDRRLLELELNNWIKGLVTEMKDPDDELQASHPLRDAKVTVEDIDDNPGFF
HHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEECCCCCCEE
RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS
EEEEEEEECEEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA