Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is ytxE [H]

Identifier: 238023638

GI number: 238023638

Start: 161937

End: 163253

Strand: Direct

Name: ytxE [H]

Synonym: bglu_2g01470

Alternate gene names: 238023638

Gene position: 161937-163253 (Clockwise)

Preceding gene: 238023637

Following gene: 238023639

Centisome position: 5.73

GC content: 68.34

Gene sequence:

>1317_bases
ATGAGCACGCATGCTCATGACGAGGCCTTCAGTTTCCTCGCGGAGCCGGGGCAGGGCGAGACCGTGTCCGGCGCGGGCGC
GTCGGGGGGCGCTTTCGGGCCGCCCCCTGCGGCCATGGACAGCGTCGCGTTCGAGCCACCCGAGGACGCGGCCACGCGCC
TCGCGCGCGTACAAGCTGCGCGCAATCCCTTGCTCGAGGCGGCGCGCTCGTTGCTGCGCATGCTCGGCGACATGCCGGCC
TCGCTCGAATCGTCGGCGGCCGTCGAAAGCCTGCGCGCGCTGCTGGTGCGCGAGGTCGCCGCGTTTCAGAAGGTCTGCGA
CAAGGCGAATTTGCCATGGAAGCACGTCGCTGCGGTGCGCTACGCACTGTGCACCGGACTCGACGAGGCGGCCAATCGCA
CCCAGTGGGGCGGCGGCGGCATCTGGGCCGCGCGCAGCCTGTTGATCCGTTTCGAGGGCGAGGTCGACGGCGGCGAGAAA
TTCTTCCTGCTGATCGGTCGGATGGCGACAGACCCGCAGGAGTACGTCGACGTGCTCGAGGTGATGTACCGGATTCTCGG
CCTCGGCTTCGAGGGGCGCTATAGCGTCGCCGAGGATGGCAGCCGCCATCTCGAGGAGATACGCCAGCGGCTGCTCACCC
TCGTGAGCGGCGCGCGCGACACGATGCGCTTGGAATTCTCGCCACATTGGCGCGGCGAGGCGTATGACCAGTTGAAATTG
TTGCGCAGCGTCCCCGTGTGGGCCACGGCGAGCGTCGCTGCGCTCGTCGTGTTTGGTCGCTTCGGCTGGTACACCTATCA
CTTGTTAACGGTCCGCAATCCGCTGGAGGCGCGGATCCTCGCGATCGGCCGCTCGCCCGCGCCGGCCGCACATGCAGCGC
CGGCGCATCTGCCGCTACGGCTGTCGGTGCTGCTCAAGGATGAAATCGCGCGTGGCGAGTTGACGGTCGACGAGGACGCG
CGGCACAGCAAGGTGGTGTTCCGGGGCGACACCATGTTCGTCACCGGCAAGAGCCGCGTCCGACCCGAGCTGGAGCCGGT
TCTGGCAAAGGTGGCGCGCGAGGTCGCCCGGGTGGGCGGGCGTGTGATCGTGACCGGCTATACCGACAGCCAGCCGATCC
ATACCCGCGAGTTTCCCGACAATCTGGTCCTGTCCCAGAAGCGTGCGGCGTTCGTCGCCGACGTGCTGAAGGCGCATGGC
ACGCCCTCCGAGCGGATTGTGTCGATCGGCAAGGGCGACGCGCAGCCGGTGGCCGACAATGCCACGCCGCAGGGGCGCTC
GCGCAACCGGCGCGTGGAAGTCCTCGTGGTGCAATGA

Upstream 100 bases:

>100_bases
GGCCGTTCTGGGATCAGATCGCTCGGCAAGGTGGTCTCGCGATGCATATCGCCGGGCATTTCCCTGAGCTCAAGCTTGAA
CTATGGGGCGTGCGCCAGAA

Downstream 100 bases:

>100_bases
CGGAGAGGTCGAATGTCCCATCTGAACCGCTTCTTCAAATTCCTCATCTCGCGTCAAACGCTCGTGTTCGTGGCGATCGT
GGCGGTCGCCGCGGCCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSTHAHDEAFSFLAEPGQGETVSGAGASGGAFGPPPAAMDSVAFEPPEDAATRLARVQAARNPLLEAARSLLRMLGDMPA
SLESSAAVESLRALLVREVAAFQKVCDKANLPWKHVAAVRYALCTGLDEAANRTQWGGGGIWAARSLLIRFEGEVDGGEK
FFLLIGRMATDPQEYVDVLEVMYRILGLGFEGRYSVAEDGSRHLEEIRQRLLTLVSGARDTMRLEFSPHWRGEAYDQLKL
LRSVPVWATASVAALVVFGRFGWYTYHLLTVRNPLEARILAIGRSPAPAAHAAPAHLPLRLSVLLKDEIARGELTVDEDA
RHSKVVFRGDTMFVTGKSRVRPELEPVLAKVAREVARVGGRVIVTGYTDSQPIHTREFPDNLVLSQKRAAFVADVLKAHG
TPSERIVSIGKGDAQPVADNATPQGRSRNRRVEVLVVQ

Sequences:

>Translated_438_residues
MSTHAHDEAFSFLAEPGQGETVSGAGASGGAFGPPPAAMDSVAFEPPEDAATRLARVQAARNPLLEAARSLLRMLGDMPA
SLESSAAVESLRALLVREVAAFQKVCDKANLPWKHVAAVRYALCTGLDEAANRTQWGGGGIWAARSLLIRFEGEVDGGEK
FFLLIGRMATDPQEYVDVLEVMYRILGLGFEGRYSVAEDGSRHLEEIRQRLLTLVSGARDTMRLEFSPHWRGEAYDQLKL
LRSVPVWATASVAALVVFGRFGWYTYHLLTVRNPLEARILAIGRSPAPAAHAAPAHLPLRLSVLLKDEIARGELTVDEDA
RHSKVVFRGDTMFVTGKSRVRPELEPVLAKVAREVARVGGRVIVTGYTDSQPIHTREFPDNLVLSQKRAAFVADVLKAHG
TPSERIVSIGKGDAQPVADNATPQGRSRNRRVEVLVVQ
>Mature_437_residues
STHAHDEAFSFLAEPGQGETVSGAGASGGAFGPPPAAMDSVAFEPPEDAATRLARVQAARNPLLEAARSLLRMLGDMPAS
LESSAAVESLRALLVREVAAFQKVCDKANLPWKHVAAVRYALCTGLDEAANRTQWGGGGIWAARSLLIRFEGEVDGGEKF
FLLIGRMATDPQEYVDVLEVMYRILGLGFEGRYSVAEDGSRHLEEIRQRLLTLVSGARDTMRLEFSPHWRGEAYDQLKLL
RSVPVWATASVAALVVFGRFGWYTYHLLTVRNPLEARILAIGRSPAPAAHAAPAHLPLRLSVLLKDEIARGELTVDEDAR
HSKVVFRGDTMFVTGKSRVRPELEPVLAKVAREVARVGGRVIVTGYTDSQPIHTREFPDNLVLSQKRAAFVADVLKAHGT
PSERIVSIGKGDAQPVADNATPQGRSRNRRVEVLVVQ

Specific function: May be involved in some transport function [H]

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 47677; Mature: 47546

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHAHDEAFSFLAEPGQGETVSGAGASGGAFGPPPAAMDSVAFEPPEDAATRLARVQAA
CCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
RNPLLEAARSLLRMLGDMPASLESSAAVESLRALLVREVAAFQKVCDKANLPWKHVAAVR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YALCTGLDEAANRTQWGGGGIWAARSLLIRFEGEVDGGEKFFLLIGRMATDPQEYVDVLE
HHHHHCCHHHHCCCCCCCCHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHH
VMYRILGLGFEGRYSVAEDGSRHLEEIRQRLLTLVSGARDTMRLEFSPHWRGEAYDQLKL
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
LRSVPVWATASVAALVVFGRFGWYTYHLLTVRNPLEARILAIGRSPAPAAHAAPAHLPLR
HHHCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHEEEEEECCCCCCCCCCCCCCCCEE
LSVLLKDEIARGELTVDEDARHSKVVFRGDTMFVTGKSRVRPELEPVLAKVAREVARVGG
EEEEEHHHHCCCCEEECCCCCCCEEEEECCEEEEECCHHCCCHHHHHHHHHHHHHHHCCC
RVIVTGYTDSQPIHTREFPDNLVLSQKRAAFVADVLKAHGTPSERIVSIGKGDAQPVADN
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCC
ATPQGRSRNRRVEVLVVQ
CCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
STHAHDEAFSFLAEPGQGETVSGAGASGGAFGPPPAAMDSVAFEPPEDAATRLARVQAA
CCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
RNPLLEAARSLLRMLGDMPASLESSAAVESLRALLVREVAAFQKVCDKANLPWKHVAAVR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YALCTGLDEAANRTQWGGGGIWAARSLLIRFEGEVDGGEKFFLLIGRMATDPQEYVDVLE
HHHHHCCHHHHCCCCCCCCHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHH
VMYRILGLGFEGRYSVAEDGSRHLEEIRQRLLTLVSGARDTMRLEFSPHWRGEAYDQLKL
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
LRSVPVWATASVAALVVFGRFGWYTYHLLTVRNPLEARILAIGRSPAPAAHAAPAHLPLR
HHHCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHEEEEEECCCCCCCCCCCCCCCCEE
LSVLLKDEIARGELTVDEDARHSKVVFRGDTMFVTGKSRVRPELEPVLAKVAREVARVGG
EEEEEHHHHCCCCEEECCCCCCCEEEEECCEEEEECCHHCCCHHHHHHHHHHHHHHHCCC
RVIVTGYTDSQPIHTREFPDNLVLSQKRAAFVADVLKAHGTPSERIVSIGKGDAQPVADN
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCC
ATPQGRSRNRRVEVLVVQ
CCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]