| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814462
Identifier: 237814462
GI number: 237814462
Start: 4080408
End: 4080992
Strand: Reverse
Name: 237814462
Synonym: GBP346_A4260
Alternate gene names: NA
Gene position: 4080992-4080408 (Counterclockwise)
Preceding gene: 237814466
Following gene: 237814460
Centisome position: 99.57
GC content: 78.63
Gene sequence:
>585_bases ATGGAGATGGCCGGTCGGGACGGCCAGTCTGGACGGCCAGCCGGGACGGACGGCGGCGGCCGCCGCCGATCGGGACGGCC CGCGTCGCTCCGCCGGCCGGCGCGACGTTCGTCGGGTTCTGCCGGTGGCGCCGCTCGGGCGGGCCGATCGGCGCTTTCCG GCGTGCTTTCTCCGCGCCTTCCCGGTCCGCCCGCCGGCGCGACCCCGCTTGCCCAAGCGCCCGCCGGCCGCGCGTTCGCC CGGTGCGTCTTCGTGATGCCGCGCTCGATCGCGGACGCAGACGCGGCTCGACAAGCCGCTCGGCGTTGGCGCGGGCCCGG CGCAGGCTGCCGTGCGATTCGGCCTGCCGCTCGGCGCCGCCCCGATGCCCCGCGCGACGCATGGCGCGACGCCCCGCACG GCGGCCCGCTCACCGAGCCGATTCGCATGGCGCGCGAACGCCCGAGCCGACCGCGGCGGGCGAACCGCGTCCGGCTGGAG CGCCATGCCATGCCACGCCGCGCGCACGCGAATCGCACCGCCGCTTCGTGCGCCGCGCGCGAACCGCTCGCGTCGATCAC GCCGCCGCCCGCGCTCGAACCGTGA
Upstream 100 bases:
>100_bases GCGGCGTGACGCCGTGCAGGCTGCCGTCCTTCTTGCCTTTGCCGCGCGGCGTGCGCACGGCGTCGAAAATGTAGGCTTCC ATGAATCGTTCCTTCGGTTG
Downstream 100 bases:
>100_bases CGCGCGGCCGAGCCGGGCCGCATCGCCCACGCGTCACGGCCACGCCGTCACAGCGTGCGCGCGATCAGTTCCTTCATGAT TTCGTTGGTGCCGCCGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MEMAGRDGQSGRPAGTDGGGRRRSGRPASLRRPARRSSGSAGGAARAGRSALSGVLSPRLPGPPAGATPLAQAPAGRAFA RCVFVMPRSIADADAARQAARRWRGPGAGCRAIRPAARRRPDAPRDAWRDAPHGGPLTEPIRMARERPSRPRRANRVRLE RHAMPRRAHANRTAASCAAREPLASITPPPALEP
Sequences:
>Translated_194_residues MEMAGRDGQSGRPAGTDGGGRRRSGRPASLRRPARRSSGSAGGAARAGRSALSGVLSPRLPGPPAGATPLAQAPAGRAFA RCVFVMPRSIADADAARQAARRWRGPGAGCRAIRPAARRRPDAPRDAWRDAPHGGPLTEPIRMARERPSRPRRANRVRLE RHAMPRRAHANRTAASCAAREPLASITPPPALEP >Mature_194_residues MEMAGRDGQSGRPAGTDGGGRRRSGRPASLRRPARRSSGSAGGAARAGRSALSGVLSPRLPGPPAGATPLAQAPAGRAFA RCVFVMPRSIADADAARQAARRWRGPGAGCRAIRPAARRRPDAPRDAWRDAPHGGPLTEPIRMARERPSRPRRANRVRLE RHAMPRRAHANRTAASCAAREPLASITPPPALEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20477; Mature: 20477
Theoretical pI: Translated: 12.63; Mature: 12.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMAGRDGQSGRPAGTDGGGRRRSGRPASLRRPARRSSGSAGGAARAGRSALSGVLSPRL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCC PGPPAGATPLAQAPAGRAFARCVFVMPRSIADADAARQAARRWRGPGAGCRAIRPAARRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHCC PDAPRDAWRDAPHGGPLTEPIRMARERPSRPRRANRVRLERHAMPRRAHANRTAASCAAR CCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH EPLASITPPPALEP CCHHHCCCCCCCCC >Mature Secondary Structure MEMAGRDGQSGRPAGTDGGGRRRSGRPASLRRPARRSSGSAGGAARAGRSALSGVLSPRL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCC PGPPAGATPLAQAPAGRAFARCVFVMPRSIADADAARQAARRWRGPGAGCRAIRPAARRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHCC PDAPRDAWRDAPHGGPLTEPIRMARERPSRPRRANRVRLERHAMPRRAHANRTAASCAAR CCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH EPLASITPPPALEP CCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA