| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237814220
Identifier: 237814220
GI number: 237814220
Start: 3845764
End: 3846444
Strand: Reverse
Name: 237814220
Synonym: GBP346_A4015
Alternate gene names: NA
Gene position: 3846444-3845764 (Counterclockwise)
Preceding gene: 237814222
Following gene: 237814219
Centisome position: 93.85
GC content: 69.75
Gene sequence:
>681_bases GTGAACATTTCTGCAGCCTTACCGCTTCATTTGCTCCATCGCAACGTGCTCGGCACGCTCGCGACGCACTCGCGCGCGCC CGAGGGCTATCCGTATCCAACCGTGGTGCCGTATGCGGTCGACGCGCGGCACCGGCCGATCGTGCTCGTGAGCGGGCTCG CCGAGCACACGCGCAATCTCGCGGCCGATCCGCGCGCCGGGTTTCTCGTCGTCGACGGCCTGGGGGACGCGGCGGGCGCG TCGGACAGCGTGCTCGAGGCGGAGCGCGCCACGCTCGTCGGCCGCTTCGAGCCGGCCGGCGCCGATCCGCACGTGGTCGC GCGTTATTTGCGCTATCACCCGGACGGCGAGCGCTATCTCGCGCTCGGCGACTTTACGTTCTGGGCGCTCGCGTGCGAGC GGCTGCGCTATATCGGCGGATTCGGGCGAATGGGATGGCTCGACGCGACCGAGTTGGACGCGCTCGCGCCCGTCGGCTAC GACGACGAACGCGCGCTATGGGACGAATACGGCGCGTCGCGGGAGCGGCGCGCGGGGCTCGAGCTGCTCGGCGTTGACCG TTATGGCGCGGACTGGCGTTTGAACGGGCTCAAGCGCCGCACGCCGTTCGACGCGCCGAAAATGGATGTCGAATCGCTGC TCGCGGCGCTGCGCGAGGCCGCCGCCGTTTCGCTCATGTAA
Upstream 100 bases:
>100_bases TGCACCGTCGCATGCCGCATGCCCGGGGGCGGCGCAACGCGCCGCGCACAGCCGCGGCGACGCGGCCGACGTCTCGCTTC CGCAAGCAAGGATTTCGCAC
Downstream 100 bases:
>100_bases AGCGATAGTGCCGATTATGAGCGATTCCGCACATTGTGAGCGTATTAAACGAGATAAGAAGGCGGTCATGCTTTCAATCA ACGGAACCTTTCGTTTCATG
Product: pyridoxamine 5'-phosphate oxidase family protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine Oxidase Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNLAADPRAGFLVVDGLGDAAGA SDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYLALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGY DDERALWDEYGASRERRAGLELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM
Sequences:
>Translated_226_residues MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNLAADPRAGFLVVDGLGDAAGA SDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYLALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGY DDERALWDEYGASRERRAGLELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM >Mature_226_residues MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNLAADPRAGFLVVDGLGDAAGA SDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYLALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGY DDERALWDEYGASRERRAGLELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24751; Mature: 24751
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHC AADPRAGFLVVDGLGDAAGASDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYL CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCEEE ALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGYDDERALWDEYGASRERRAGL EEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCC ELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHC AADPRAGFLVVDGLGDAAGASDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYL CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCEEE ALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGYDDERALWDEYGASRERRAGL EEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCC ELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA