| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is aroK [H]
Identifier: 237814099
GI number: 237814099
Start: 3736759
End: 3737388
Strand: Reverse
Name: aroK [H]
Synonym: GBP346_A3885
Alternate gene names: 237814099
Gene position: 3737388-3736759 (Counterclockwise)
Preceding gene: 237814100
Following gene: 237814098
Centisome position: 91.19
GC content: 65.08
Gene sequence:
>630_bases GTGGGAGCCAGGCTCGACAAGGCGGGCGCTTTGCCAGTAAGCTGCGCGACACACTCACTGAAGCAGAGGAAGCCGTTGCA AGCGCGGGACCCACACGTGAACGTAATTTTCGTCGGGCTCATGGGGGCGGGTAAGACCACCGTGGGCCGGGCGGTCGCGC GCCGGCTCGACAGACCCTTCTTCGATTCGGATCATGAGATCGAGGCGCGCACCGGCGCGCGCATTCCGGTCATCTTCGAA CTCGAGGGCGAAGCGGGCTTCCGTGACCGCGAGGCGCAGATGATCGCCGAGCTCACGCAGCGCGAGAACATCGTGCTGGC GACGGGCGGCGGCGCGATCCTGCGCCCCGAGAACCGCAAGCTGCTTCACGAACGGGGCCTCGTCGTCTATCTGCGCGCGA ATCCGCACGATCTCTGGCTGCGCACCCGCAAGGACAAGAATCGCCCGCTGTTGCAGACCGACGATCCGAAAGCCAAGCTC GAAGCGCTGTACGAAGCGCGCGATCCGCTCTACCGCGAATGCGCGCACTTCGTCATCGAAACCGGGCGGCCGTCCGTCAA CGGGCTCGTCAACATGGTGCTGATGCAGCTCGAAATGGCGGGCATCGTCGCCAAGCCACTCCAAGCATGA
Upstream 100 bases:
>100_bases CGGTGTTGGGCGCGCTTTTCAGGCATCGTGCGCAGCGTGCGCAGCGCAGCGAGCTCGTCGTCTACATCACGCCGACCGTC GTGATCGGGCCCTGACGCCC
Downstream 100 bases:
>100_bases TTACCGTCAACGTCGACCTGGGCGAGCGCGCCTATCCGATCCACATCGGCGCCGATCTGATCGGCCGCACCGAGCTTTTC GCGCCGCACATCGCGGGCGC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGARLDKAGALPVSCATHSLKQRKPLQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFE LEGEAGFRDREAQMIAELTQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKL EALYEARDPLYRECAHFVIETGRPSVNGLVNMVLMQLEMAGIVAKPLQA
Sequences:
>Translated_209_residues MGARLDKAGALPVSCATHSLKQRKPLQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFE LEGEAGFRDREAQMIAELTQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKL EALYEARDPLYRECAHFVIETGRPSVNGLVNMVLMQLEMAGIVAKPLQA >Mature_208_residues GARLDKAGALPVSCATHSLKQRKPLQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFEL EGEAGFRDREAQMIAELTQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKLE ALYEARDPLYRECAHFVIETGRPSVNGLVNMVLMQLEMAGIVAKPLQA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=48.7951807228916, Blast_Score=158, Evalue=2e-40, Organism=Escherichia coli, GI1786587, Length=155, Percent_Identity=38.0645161290323, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 23315; Mature: 23184
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS01128 SHIKIMATE_KINASE ; PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARLDKAGALPVSCATHSLKQRKPLQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPF CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCC FDSDHEIEARTGARIPVIFELEGEAGFRDREAQMIAELTQRENIVLATGGGAILRPENRK CCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCHH LLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKLEALYEARDPLYRECAHFVIE HHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH TGRPSVNGLVNMVLMQLEMAGIVAKPLQA CCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GARLDKAGALPVSCATHSLKQRKPLQARDPHVNVIFVGLMGAGKTTVGRAVARRLDRPF CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCC FDSDHEIEARTGARIPVIFELEGEAGFRDREAQMIAELTQRENIVLATGGGAILRPENRK CCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCHH LLHERGLVVYLRANPHDLWLRTRKDKNRPLLQTDDPKAKLEALYEARDPLYRECAHFVIE HHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH TGRPSVNGLVNMVLMQLEMAGIVAKPLQA CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA