Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is thiS

Identifier: 237814080

GI number: 237814080

Start: 3714548

End: 3714745

Strand: Reverse

Name: thiS

Synonym: GBP346_A3865

Alternate gene names: NA

Gene position: 3714745-3714548 (Counterclockwise)

Preceding gene: 237814081

Following gene: 237814079

Centisome position: 90.64

GC content: 72.73

Gene sequence:

>198_bases
ATGGACATCCAGGTCAACCAACAGACGTTCTCGCTGCCCGACGGCGCGACGGTGGCCGACGCGCTCGCCGCATACGGCGC
GCGACCGCCGTTCGCGGTCGCGGTCAACGGCGCGTTCGTCGCGCGCACGCAGCATGCGGCGCGTGCGCTCGCCGCGGGCG
ACAAGCTCGACATCGTGCATCCGGTCGCGGGCGGCTGA

Upstream 100 bases:

>100_bases
CGCGCGCTGGCCGGCGCTGCTGCAGCAGCGCGCGGCGCACGCGTCCGCGTGAGCGCCGGACGAGCCGGCCAATTCCGATC
AATCGACATCGACAGCCATC

Downstream 100 bases:

>100_bases
CGCGCCGCCGCGCGCGCCTCGCCCCCGCTCCCCGTTCCCACAGGATCTTCCGATGACGCCTCTTTCTTCAGCCGATACGC
TCACGCTGCACGGCCAAACC

Product: sulfur carrier protein ThiS

Products: NA

Alternate protein names: Thiamine Biosynthesis Protein ThiS; ThiS Protein; Sulfur Transfer Protein Involved In Thiamine Biosynthesis; ThiS Thiamine-Biosynthesis

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MDIQVNQQTFSLPDGATVADALAAYGARPPFAVAVNGAFVARTQHAARALAAGDKLDIVHPVAGG

Sequences:

>Translated_65_residues
MDIQVNQQTFSLPDGATVADALAAYGARPPFAVAVNGAFVARTQHAARALAAGDKLDIVHPVAGG
>Mature_65_residues
MDIQVNQQTFSLPDGATVADALAAYGARPPFAVAVNGAFVARTQHAARALAAGDKLDIVHPVAGG

Specific function: Unknown

COG id: COG2104

COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6572; Mature: 6572

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQVNQQTFSLPDGATVADALAAYGARPPFAVAVNGAFVARTQHAARALAAGDKLDIVH
CCCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHCCCCCEEEC
PVAGG
CCCCC
>Mature Secondary Structure
MDIQVNQQTFSLPDGATVADALAAYGARPPFAVAVNGAFVARTQHAARALAAGDKLDIVH
CCCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHCCCCCEEEC
PVAGG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA