| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is mlaA [H]
Identifier: 237814074
GI number: 237814074
Start: 3709327
End: 3710337
Strand: Reverse
Name: mlaA [H]
Synonym: GBP346_A3859
Alternate gene names: 237814074
Gene position: 3710337-3709327 (Counterclockwise)
Preceding gene: 237814075
Following gene: 237814073
Centisome position: 90.53
GC content: 69.93
Gene sequence:
>1011_bases GTGAACGCCGCGCAAGCGGCATACGAGAGAAGAAAAGAGGGGAAGAACATCATGCAGACGATCCGCATCAGCCCAGCGGT GCTGGCGATCACGGCCGCCGCGGCATTGAGCGGTTGCGCGACAGTCCAGACGCCGACCAAGGGCGACCCGTTCGAAGGCT TCAACCGGACGATGTACACGTTCAACGACAAGGTCGACCAGTACGCGCTCAAGCCGGTCGCGCGCGGCTATCAGTGGGCG GTGCCGCAGCCGATGCGCGACAGCGTGACGAACTTCTTCTCGAACATCGGCGACGTCTACATCGCCGCGAACAACCTCGT GCAGCTGAAGATCGCCGACGGCGTCGGCGACATCATGCGGGTCGTGATCAACACGGTGTTCGGCGTGGGCGGCCTGTTCG ACGTCGCGACGCTCGCGAAGCTGCCGAAACACGCGAACGACTTCGGCGTGACGCTCGGCCACTACGGCGTGCCGAGCGGC CCGTACCTCGTGCTGCCGCTGCTCGGCCCGAGCACCGTGCGCGACACGGCGGGCCTCGCCGTCGACTACGCGGGCAACCC GCTTACCTATGTACGGCCCGACGGCGTGAGCTGGGGCCTGTTCGGGCTGAACCTCGTGAACACGCGCGCGAACCTGCTCG GCGCGGGCGACGTGCTCGAGGCAGCCGCGATCGACAAGTATTCGTTCGTGCGCAACGCGTACCTGCAGCGCCGCCAGGCG CTGATCGGCGGCGCCACGGGCGCGCAGTCGAACCTGCCGGATTACGGCAGCGAGGCGCCGCCGCCGAATTACGAGATGCC GGAAGAGGGCGCCGCGGCGCCCGCGAGCGGCGCGGCATCGGCGCCGGCCGCCGCTTCCGCGCCCACGGCGGCGTCCGGTG CGGCGCCGGGCGCGGCCGAGCCCGCATCGGCCGCGGCGCCGAATCCGAGCAGCGCGACGAACGTGCCCGCTCAGCAGGTC GTGCCGCCGTCGCCGGGCGGCATCCGTTTCCCGAGCATCCGGCTGCACTGA
Upstream 100 bases:
>100_bases AGGCCGCGGACGCGGGCGGCGCGAAGCCGGGCGCCGCCGCATCGGGCGCGCCGGCGCCCGCGCCGGTGGCGGCATCGGCG GCATCGGGCGCGGCGGCACA
Downstream 100 bases:
>100_bases CCCGACACTTACATCGGTTACAGCCGGAAACGATTCTGACGGCGGCCGGCGCGAACTTGCGCCGGCGTCGACGGTTCCAA GTCTGGCATCGACTCATACA
Product: lipoprotein, VacJ family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNAAQAAYERRKEGKNIMQTIRISPAVLAITAAAALSGCATVQTPTKGDPFEGFNRTMYTFNDKVDQYALKPVARGYQWA VPQPMRDSVTNFFSNIGDVYIAANNLVQLKIADGVGDIMRVVINTVFGVGGLFDVATLAKLPKHANDFGVTLGHYGVPSG PYLVLPLLGPSTVRDTAGLAVDYAGNPLTYVRPDGVSWGLFGLNLVNTRANLLGAGDVLEAAAIDKYSFVRNAYLQRRQA LIGGATGAQSNLPDYGSEAPPPNYEMPEEGAAAPASGAASAPAAASAPTAASGAAPGAAEPASAAAPNPSSATNVPAQQV VPPSPGGIRFPSIRLH
Sequences:
>Translated_336_residues MNAAQAAYERRKEGKNIMQTIRISPAVLAITAAAALSGCATVQTPTKGDPFEGFNRTMYTFNDKVDQYALKPVARGYQWA VPQPMRDSVTNFFSNIGDVYIAANNLVQLKIADGVGDIMRVVINTVFGVGGLFDVATLAKLPKHANDFGVTLGHYGVPSG PYLVLPLLGPSTVRDTAGLAVDYAGNPLTYVRPDGVSWGLFGLNLVNTRANLLGAGDVLEAAAIDKYSFVRNAYLQRRQA LIGGATGAQSNLPDYGSEAPPPNYEMPEEGAAAPASGAASAPAAASAPTAASGAAPGAAEPASAAAPNPSSATNVPAQQV VPPSPGGIRFPSIRLH >Mature_336_residues MNAAQAAYERRKEGKNIMQTIRISPAVLAITAAAALSGCATVQTPTKGDPFEGFNRTMYTFNDKVDQYALKPVARGYQWA VPQPMRDSVTNFFSNIGDVYIAANNLVQLKIADGVGDIMRVVINTVFGVGGLFDVATLAKLPKHANDFGVTLGHYGVPSG PYLVLPLLGPSTVRDTAGLAVDYAGNPLTYVRPDGVSWGLFGLNLVNTRANLLGAGDVLEAAAIDKYSFVRNAYLQRRQA LIGGATGAQSNLPDYGSEAPPPNYEMPEEGAAAPASGAASAPAAASAPTAASGAAPGAAEPASAAAPNPSSATNVPAQQV VPPSPGGIRFPSIRLH
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=258, Percent_Identity=37.2093023255814, Blast_Score=135, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 34751; Mature: 34751
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAQAAYERRKEGKNIMQTIRISPAVLAITAAAALSGCATVQTPTKGDPFEGFNRTMYT CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEE FNDKVDQYALKPVARGYQWAVPQPMRDSVTNFFSNIGDVYIAANNLVQLKIADGVGDIMR ECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHH VVINTVFGVGGLFDVATLAKLPKHANDFGVTLGHYGVPSGPYLVLPLLGPSTVRDTAGLA HHHHHHHCCCHHHHHHHHHHHCCCCCHHCEEECCCCCCCCCEEEEECCCCCHHHHCCCEE VDYAGNPLTYVRPDGVSWGLFGLNLVNTRANLLGAGDVLEAAAIDKYSFVRNAYLQRRQA EEECCCCEEEECCCCCEECHHHEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LIGGATGAQSNLPDYGSEAPPPNYEMPEEGAAAPASGAASAPAAASAPTAASGAAPGAAE HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PASAAAPNPSSATNVPAQQVVPPSPGGIRFPSIRLH CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEC >Mature Secondary Structure MNAAQAAYERRKEGKNIMQTIRISPAVLAITAAAALSGCATVQTPTKGDPFEGFNRTMYT CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEE FNDKVDQYALKPVARGYQWAVPQPMRDSVTNFFSNIGDVYIAANNLVQLKIADGVGDIMR ECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHH VVINTVFGVGGLFDVATLAKLPKHANDFGVTLGHYGVPSGPYLVLPLLGPSTVRDTAGLA HHHHHHHCCCHHHHHHHHHHHCCCCCHHCEEECCCCCCCCCEEEEECCCCCHHHHCCCEE VDYAGNPLTYVRPDGVSWGLFGLNLVNTRANLLGAGDVLEAAAIDKYSFVRNAYLQRRQA EEECCCCEEEECCCCCEECHHHEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LIGGATGAQSNLPDYGSEAPPPNYEMPEEGAAAPASGAASAPAAASAPTAASGAAPGAAE HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PASAAAPNPSSATNVPAQQVVPPSPGGIRFPSIRLH CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]