| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814072
Identifier: 237814072
GI number: 237814072
Start: 3708314
End: 3708583
Strand: Reverse
Name: 237814072
Synonym: GBP346_A3857
Alternate gene names: NA
Gene position: 3708583-3708314 (Counterclockwise)
Preceding gene: 237814073
Following gene: 237814071
Centisome position: 90.48
GC content: 72.96
Gene sequence:
>270_bases GTGAGCCGCTTCGACTCGGGCGCCACGCTGACCCACGCGAGCGCGAAAGCCGCGCTCGCCCAAGGGCTCGCGCGCATCGA GGCGGGCGCCACCGCCGTCGATTGCGGCGCGCTCGCGCAATTCGATTCGTCGGCGCTCGCGGTGCTGCTCGCCTGGCAGC GCGCCGCGCGCGCGCGCGGCGTGACGCTAGACATCGAGAACCTGCCGCCGAAGCTCGCGAGCCTCGCGCAGGCGTACGGG ATCGACACGCTTCTCTCCGGGCGACATTGA
Upstream 100 bases:
>100_bases AGCAGCAGTTCAGCGAGAAGATCCAGCAAAGCGGCGTGGAGGGGCTGATCCAGTTCCTGACCGAACGCAACCAGCAGCTT GCCTCGGGCAAGCAGGCATC
Downstream 100 bases:
>100_bases CGCCCGCGTCCGGGCTCGCCCACGGCCGTCGCGCCCGTGGGCGAGCCGCTGCCTTTCCGTTGATTAGCAGGGCCCGCGCC GGCCGGGCCGGGCGCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVTLDIENLPPKLASLAQAYG IDTLLSGRH
Sequences:
>Translated_89_residues MSRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVTLDIENLPPKLASLAQAYG IDTLLSGRH >Mature_88_residues SRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARGVTLDIENLPPKLASLAQAYGI DTLLSGRH
Specific function: Unknown
COG id: COG3113
COG function: function code R; Predicted NTP binding protein (contains STAS domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9133; Mature: 9002
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARG CCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCHHHHHHHHHHHHHHHCC VTLDIENLPPKLASLAQAYGIDTLLSGRH CEEECCCCCHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure SRFDSGATLTHASAKAALAQGLARIEAGATAVDCGALAQFDSSALAVLLAWQRAARARG CCCCCCCEECHHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCHHHHHHHHHHHHHHHCC VTLDIENLPPKLASLAQAYGIDTLLSGRH CEEECCCCCHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA