| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yrbA [C]
Identifier: 237814069
GI number: 237814069
Start: 3706015
End: 3706254
Strand: Reverse
Name: yrbA [C]
Synonym: GBP346_A3854
Alternate gene names: 237814069
Gene position: 3706254-3706015 (Counterclockwise)
Preceding gene: 237814070
Following gene: 237814068
Centisome position: 90.43
GC content: 61.25
Gene sequence:
>240_bases ATGTTGCCGACTCCCGAACTGGTCAAGCAATACATCGAGGCAGGCCTTGCCTGCACGCATCTGGAAGTCGAAGGCGACGG CCAGCATTTCTTCGCGACGATCGTGTCGTCCGCGTTCGAGGGCAAGCGGCCGATCCAGCGGCATCAGCTCGTCTATGCGG CGCTCGGCGACCGCATGAAGCAGGAAATCCACGCGCTCAGCATGAAGACGCTGACGCCCGCCGAATGGCAGAACGCATAA
Upstream 100 bases:
>100_bases AAACTGCGTCATTGATATGAAGCGACGGCCGCCCGCCGCGTTCGCCGCCGCTTCGCGGCGCGCGCCCGGGCGGCCTGGCG CGTACTGACAGGAGCATTTC
Downstream 100 bases:
>100_bases ACGGAAACAGTCAGTGCAAGTCACCGTCAACGAACACGACGCCGTCGAGCGCGTCGCCACGGCAACCCCGGCCGGCAATC GGGAAGCGCACGCGCACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: BolA-Like Protein; BolA Protein; BolA Family Transcriptional Regulator; BolA-Like Cell Cycle Protein; Transcriptional Regulator Transcription Regulator Protein; Bola Family Protein; BolA/YrbA Family Protein
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MLPTPELVKQYIEAGLACTHLEVEGDGQHFFATIVSSAFEGKRPIQRHQLVYAALGDRMKQEIHALSMKTLTPAEWQNA
Sequences:
>Translated_79_residues MLPTPELVKQYIEAGLACTHLEVEGDGQHFFATIVSSAFEGKRPIQRHQLVYAALGDRMKQEIHALSMKTLTPAEWQNA >Mature_79_residues MLPTPELVKQYIEAGLACTHLEVEGDGQHFFATIVSSAFEGKRPIQRHQLVYAALGDRMKQEIHALSMKTLTPAEWQNA
Specific function: Unknown
COG id: COG5007
COG function: function code K; Predicted transcriptional regulator, BolA superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8850; Mature: 8850
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTPELVKQYIEAGLACTHLEVEGDGQHFFATIVSSAFEGKRPIQRHQLVYAALGDRMK CCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QEIHALSMKTLTPAEWQNA HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLPTPELVKQYIEAGLACTHLEVEGDGQHFFATIVSSAFEGKRPIQRHQLVYAALGDRMK CCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QEIHALSMKTLTPAEWQNA HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA