| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814057
Identifier: 237814057
GI number: 237814057
Start: 3696430
End: 3696819
Strand: Reverse
Name: 237814057
Synonym: GBP346_A3842
Alternate gene names: NA
Gene position: 3696819-3696430 (Counterclockwise)
Preceding gene: 237814058
Following gene: 237814056
Centisome position: 90.2
GC content: 60.26
Gene sequence:
>390_bases ATGCCGGAGTCGCCGAACCAATTTCCGCCGTCGTACCAGAGCGCGACCGAGAGCGAACGCCAGCAGTCGTTGCGTACGCT GACGCACATCCTCTATCTGCTGTACGCGATTCACTGGCTGACGGGCGGCATTACGGGCATCGTCGCGATCATCATCAACT ACGTGAAGCGCGACGACGCGGTGGGCACCGCGTATCAGGCTCATTTCGAATGGCAGATCCGCACGTTCTGGCGCGCGCTG ATCGCGTATCTGATCGGCTTCGCGCTGCTGCTCGTCGGGATCGGCTTCATCGTGCTGGGCGCGGTGTGGATCTGGACGCT GTACCGTATCATCAAAGGCTGGCTGTACTTGAACGACAACAAGACGCTCGATCCGCAGGCATGGTTCTGA
Upstream 100 bases:
>100_bases GAAAAGGCGCTGCGCAAGCGCCGCGAGCGCGAGGAAAACGGCGGTTGAGCCAATGCGGCCACGCGCCGCGTAAGTTTTGT CATCAAAGGGGAATAGCATC
Downstream 100 bases:
>100_bases CGCCGCGGCGAACGCGTCGGGGAACGCGATGAATCACGACCCGAACTGCCTGTTCTGCAAGATCGCGGCAGGCGAGATTC CGAGCACGAAGGTGCACGAG
Product: membrane protein
Products: NA
Alternate protein names: Chaperone Protein DNAJ
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPESPNQFPPSYQSATESERQQSLRTLTHILYLLYAIHWLTGGITGIVAIIINYVKRDDAVGTAYQAHFEWQIRTFWRAL IAYLIGFALLLVGIGFIVLGAVWIWTLYRIIKGWLYLNDNKTLDPQAWF
Sequences:
>Translated_129_residues MPESPNQFPPSYQSATESERQQSLRTLTHILYLLYAIHWLTGGITGIVAIIINYVKRDDAVGTAYQAHFEWQIRTFWRAL IAYLIGFALLLVGIGFIVLGAVWIWTLYRIIKGWLYLNDNKTLDPQAWF >Mature_128_residues PESPNQFPPSYQSATESERQQSLRTLTHILYLLYAIHWLTGGITGIVAIIINYVKRDDAVGTAYQAHFEWQIRTFWRALI AYLIGFALLLVGIGFIVLGAVWIWTLYRIIKGWLYLNDNKTLDPQAWF
Specific function: Unknown
COG id: COG3671
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14934; Mature: 14802
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESPNQFPPSYQSATESERQQSLRTLTHILYLLYAIHWLTGGITGIVAIIINYVKRDDA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VGTAYQAHFEWQIRTFWRALIAYLIGFALLLVGIGFIVLGAVWIWTLYRIIKGWLYLNDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC KTLDPQAWF CCCCCCCCC >Mature Secondary Structure PESPNQFPPSYQSATESERQQSLRTLTHILYLLYAIHWLTGGITGIVAIIINYVKRDDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VGTAYQAHFEWQIRTFWRALIAYLIGFALLLVGIGFIVLGAVWIWTLYRIIKGWLYLNDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC KTLDPQAWF CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA