Click here to switch to the map view.

The map label for this gene is 237814042

Identifier: 237814042

GI number: 237814042

Start: 3685960

End: 3687015

Strand: Reverse

Name: 237814042

Synonym: GBP346_A3826

Alternate gene names: NA

Gene position: 3687015-3685960 (Counterclockwise)

Preceding gene: 237814043

Following gene: 237814039

Centisome position: 89.96

GC content: 66.38

Gene sequence:

>1056_bases
ATGAGCAAGCGCCGATCGCGCGCGCCGCGCACGTTCGCGGCCGCGCCCAATCCGAGCGCCGGCAGCGCCGCGCCGGCGCG
TGCCGAGGTCTTCACGTTCGACGAACCGACGCCCGTCATGAACCGGGCCGAGATTCTCGATTACGTCGAGTGCTGGTCGA
ACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCCTGGCGAAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCG
CTGTTCTTCAAGGCGAACGTGCTGGCGTCGACATTCCGCCCGCACCGCTGGCTGTCGCGGCACGCGTTCGAGCGGTGGGC
GCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAGCGCCGCCGCAACATGGTCGGCGGCACGCTGCGGCTCGAGCCCG
CGCTCGCGAAGTACGTACGGCGCAAGGCGGATTTCAGCGGCTTCGTGTACGTGAACGGCTGGCAGGAGCGGCACGAGTTC
GCGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCAGGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCT
GCACTCGGCGTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCC
TGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACAACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGC
AACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAGGACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGC
GAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGACGATCTGCTCGCCGCACACCGCGTGCCGCCGCAGTTGCTCG
GCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGATACCGCTGCGCGCGTGTTCGGGCGCAATGAAATCAGGCCG
CTACAGGCGCGCTTCGCCGAGCTGAACGACTGGCTCGGCGAGGAGGTCGTGACGTTCGACGATTACGAGATTCCGCCGGC
GCCGGTCGCAGCGTAG

Upstream 100 bases:

>100_bases
CGGGCCACGCCGACCTGGCGTGGGCGTGCCTGCACGCGATCGACCGCGAGCCGCTCGCCGGCGGCGGCATTCATTCATCT
TCATTCACGGAGTTTTACGC

Downstream 100 bases:

>100_bases
CGCGCAGACCAGTGCAACGCCGCGCATCCGGCCATCGATGGCGTTACGCGTGCGCAGCCGTGCGAACGCGCGAGCGTGCA
CGCGTTGTTGCCGGCGCGGG

Product: phage portal protein, pbsx family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDEPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA
LFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEF
APDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPG
NFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRP
LQARFAELNDWLGEEVVTFDDYEIPPAPVAA

Sequences:

>Translated_351_residues
MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDEPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA
LFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEF
APDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPG
NFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRP
LQARFAELNDWLGEEVVTFDDYEIPPAPVAA
>Mature_350_residues
SKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDEPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSAL
FFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEFA
PDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGN
FRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPL
QARFAELNDWLGEEVVTFDDYEIPPAPVAA

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 39504; Mature: 39373

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDEPTPVMNRAEILDYVECWSNGEWFEP
CCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC
PVSFAGLAKSFRASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLER
CHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
RRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEFAPDSVFQLVRPDINQEVYGL
HHHHCCCEEEECHHHHHHHHHHCCCCCEEEECCHHHHHHCCHHHHHHHHCCCCCCHHCCC
PEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPG
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCC
NFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNS
CCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEECCC
GGFGTPDTAARVFGRNEIRPLQARFAELNDWLGEEVVTFDDYEIPPAPVAA
CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDEPTPVMNRAEILDYVECWSNGEWFEP
CCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC
PVSFAGLAKSFRASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLER
CHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
RRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEFAPDSVFQLVRPDINQEVYGL
HHHHCCCEEEECHHHHHHHHHHCCCCCEEEECCHHHHHHCCHHHHHHHHCCCCCCHHCCC
PEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPG
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCC
NFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNS
CCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEECCC
GGFGTPDTAARVFGRNEIRPLQARFAELNDWLGEEVVTFDDYEIPPAPVAA
CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]