| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yqiA [H]
Identifier: 237813865
GI number: 237813865
Start: 3515855
End: 3516424
Strand: Reverse
Name: yqiA [H]
Synonym: GBP346_A3643
Alternate gene names: 237813865
Gene position: 3516424-3515855 (Counterclockwise)
Preceding gene: 237813866
Following gene: 237813864
Centisome position: 85.8
GC content: 67.89
Gene sequence:
>570_bases GTGATCCTGTATCTGCATGGCTTCCGTTCGTCGCCGCAGTCGTTCAAGGCGCGCGCGCTGGCCGCGCGGCTAGACGAACT CGGCCGAGCGGACGAATGGCGCTGCCCCGTGCTGTCGGTCGCGCCGCTCGCCGCGATCGCGGCCGTCGAGGCGGAAGTCG CCGGCGTGCCGGCGCAACGCGTTACCGTGATCGGCAGCTCGCTCGGCGGCTATTACGCGACGTGGCTCGCGGAAAAGCAC GGCTGGCGCGCGGTGCTGCTGAATCCCGCGACGCAGCCGCAGCGGGATCTGCGCCGTCATCTCGGCGAGCAGCCGCTGTG GCACGGCGGCGGCACGATCGTCGTCGAGCCGCATCATCTGGACGAGCTGAACGCGTTGCACGTCGCGGCGATCTCGCGAC CCGAGCGCTACTATCTGTTCGCGGCGACGGGCGACGAGGTGCTCGACTACCGCGAGATGCTTGCCCGCTATCCGGGCGCG CGAACCCGCGTCATCGAAGGCAGCGATCACGGGATCAGTGAATTTGCCGACTATATCGACGACGTTCTCGCATTTTGTGA CGCCGGATAG
Upstream 100 bases:
>100_bases ACGTGCTCGTGATGAGCAACGGCGGCTTCGGCGGTGTGCACCAGAAGCTGCTCGACGCGCTGTCCGCCCGCGGCGACGCG GCGCCGGCCCGGAGCGGCGC
Downstream 100 bases:
>100_bases CCGCGCGCCGGATGCGAGATCCGGTGCGCGGCACGTCTGCACCCTATACACCACACGCGGCGTCGACGGCTTCCGAAGCG AAGCGCGGCGCGCGAAAGTC
Product: esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MILYLHGFRSSPQSFKARALAARLDELGRADEWRCPVLSVAPLAAIAAVEAEVAGVPAQRVTVIGSSLGGYYATWLAEKH GWRAVLLNPATQPQRDLRRHLGEQPLWHGGGTIVVEPHHLDELNALHVAAISRPERYYLFAATGDEVLDYREMLARYPGA RTRVIEGSDHGISEFADYIDDVLAFCDAG
Sequences:
>Translated_189_residues MILYLHGFRSSPQSFKARALAARLDELGRADEWRCPVLSVAPLAAIAAVEAEVAGVPAQRVTVIGSSLGGYYATWLAEKH GWRAVLLNPATQPQRDLRRHLGEQPLWHGGGTIVVEPHHLDELNALHVAAISRPERYYLFAATGDEVLDYREMLARYPGA RTRVIEGSDHGISEFADYIDDVLAFCDAG >Mature_189_residues MILYLHGFRSSPQSFKARALAARLDELGRADEWRCPVLSVAPLAAIAAVEAEVAGVPAQRVTVIGSSLGGYYATWLAEKH GWRAVLLNPATQPQRDLRRHLGEQPLWHGGGTIVVEPHHLDELNALHVAAISRPERYYLFAATGDEVLDYREMLARYPGA RTRVIEGSDHGISEFADYIDDVLAFCDAG
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=184, Percent_Identity=38.5869565217391, Blast_Score=125, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 20802; Mature: 20802
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILYLHGFRSSPQSFKARALAARLDELGRADEWRCPVLSVAPLAAIAAVEAEVAGVPAQR CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH VTVIGSSLGGYYATWLAEKHGWRAVLLNPATQPQRDLRRHLGEQPLWHGGGTIVVEPHHL EEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCCEEEECCCCC DELNALHVAAISRPERYYLFAATGDEVLDYREMLARYPGARTRVIEGSDHGISEFADYID CCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH DVLAFCDAG HHHHHHCCC >Mature Secondary Structure MILYLHGFRSSPQSFKARALAARLDELGRADEWRCPVLSVAPLAAIAAVEAEVAGVPAQR CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH VTVIGSSLGGYYATWLAEKHGWRAVLLNPATQPQRDLRRHLGEQPLWHGGGTIVVEPHHL EEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCCEEEECCCCC DELNALHVAAISRPERYYLFAATGDEVLDYREMLARYPGARTRVIEGSDHGISEFADYID CCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH DVLAFCDAG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]