| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is mutL [H]
Identifier: 237813666
GI number: 237813666
Start: 3324330
End: 3326375
Strand: Direct
Name: mutL [H]
Synonym: GBP346_A3443
Alternate gene names: 237813666
Gene position: 3324330-3326375 (Clockwise)
Preceding gene: 237813663
Following gene: 237813667
Centisome position: 81.11
GC content: 72.39
Gene sequence:
>2046_bases ATGTCCGAATTCACCGATTCCGCCGCGGGCCGCTCGAGCACGCCGCCCGCCGACGCGCCGTCGCCCGCCTCGCGCCCGCT GCGCGCGATCCAGCCGCTGCCCGACCAGTTGATCAGCCAGATCGCGGCGGGCGAAGTGGTCGAGCGGCCCGCCTCCGTCG TCAAGGAGCTCGTCGAGAACGCGCTCGACGCCGGCGCGGGCACGCTGCGCATCCTGCTCGACGAAGGCGGCGTCAAGCGC ATCTCGATCACCGACGACGGCTGCGGGATTCCCGCCGACGAGCTGCCGCTCGCGCTGATGCGCCACGCGACGAGCAAGAT CCGCTCGCTCGCCGAGCTCGAGGCGGTCGCGACGCTCGGGTTCCGCGGCGAAGCGCTCGCATCGATCGCGTCGGTCGCCG AGATGTTCATCACGAGCCGCACCGAGGACGCCGCGCACGCGACGCGCATCGACGCGCAGACGGGCGTCGTCGGGCCCGCG GCCGGCACGCGCGGCACGACGATCGAAGTGCGCGAGCTGTACTTCAGCACGCCCGCGCGCCGCAAGTTCCTGAAGAGCGA GCAGACCGAGTTCGGCCATTGCCTCGAGATGATTCGCCGCGCGGCGCTCGCGCGGCCGGACGTCGCGATCTCGGTGCTGC ACAACGGCCGCGCGGTCGAGCACTGGAACGCGAGCGAGCCCGCCGCGCGCGTCGCGAAGATCCTCGGCGACGGTTTCGCC ACCGCCCATCTGCCGCTCGACGAGCGCGCCGGCCCGCTCGCCGTCTACGGCTGCGCGGGGCTGCCGACCGCGAGCCGCGG CCGCGCGGACCAGCAATACTTCTTCGTCAACGGCCGCTTCGTGCGCGACAAACTGCTCACGCACGCGGTGCGCGCCGCGT ACGAGGACGTGCTGCACGGCGACCGCTATCCGTCGTACGTGCTGTTCCTCGACCTGCCGCCGGAAGCCGTCGACGTGAAC GTCCATCCGTCGAAGATCGAGGTGCGCTTCCGCGATTCGCGCTCGATCCACCAGTTCGTGTTCCACGCGGTGCAGCGCGC GCTCGCGCGGCACGCGGGCGCGTCGCCCGAGACGACGGCGGGCGGCCACGCCGCGCATCTTGCGCCCATCGTGCCGGCAT CGGCCGACTCGGCGGCCGCGCCGGGCGCCTCGTTTGTCCGCTCGGGCCCGACGGCGGGCGCGGGCGTCGGTCAGCCCGCG TCCGGCAATACATGGCTGCGCCAGTCGCGGATGACGCAGGGCACGCTGCCCGTCGCGCAGCCGCTCGCGCTGTACGACGC GCTGTTCGGCCGCAAGGACACGGGCGCGGGCACCCCGCACGGCGCGACGCTCGCGCTCGAAGCGCATGACGCGCCGGACG GGGCGAATGCGCCGGGCGCGCCGCTCTACGCGACCATGCCGGGCGGCGACGCGACGCCCGCGTTCTCCCCGGCGGGTGCA GCCGGTCTTCCGATGCACGACGAGCAGCCGCTCGGCTTCGCGGTCGGCCAGATCCACGGCATTTACGTGCTCGCGCAGAA CGCGCGCGGGCTCGTGATCGTCGACATGCACGCCGCGCACGAGCGGATCCTGTACGAGCAGTTCAAGCGCGCGCTCGCCG ATCGCACGATCGCCGTGCAGACGCTGCTGATTCCGGTGTCGATGACGGCGACGCCCGTCGAGGTCGGCACCGCGGAGGAG GAGCGCGAGACGCTCGACGCGCTCGGCTTCGATCTCGCGGTGCTGTCACCGACGACGCTCGCGATCCGCGCGGTGCCCGC CTTGCTGAAGGACGCCGACCTGCAAGCGCTCGCGCGCGCGGTGCTCGCGGATCTGCATGCGTTCGGCGGCTCGCGGGTGC TGACCGAGCGCCAGCACGAGCTGCTCGGCACGCTCGCGTGCCATCACGCGGTGCGCGCGAACCGGCGTCTCACGCTCGAC GAGATGAACGCGCTGCTGCGGCAGATGGAGGCGACCGAGCGCGCGGATCAGTGCAACCATGGCCGGCCGACCTGGTATCA ACTGACGCTCGGCGATCTCGACAAGCTTTTCATGCGCGGCCAATGA
Upstream 100 bases:
>100_bases CCGAAAGTGCCTTAAGCGACCGTGAAATTCGGCCGACGAGCGACGTCGCGCACCGAACGCGGCACGCGCCGCGCCACGCG GCCTCGCTATAATCCCCGTC
Downstream 100 bases:
>100_bases GCGAACGCAACGCGGCGTCCGCGCGCACGGTCGCGTGCCTGCTCGGCCCCACCGCCTCCGGCAAGACAGCCGCCGCGCTC GCGCTCGCCGCGCGCCGGCC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MSEFTDSAAGRSSTPPADAPSPASRPLRAIQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKR ISITDDGCGIPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATRIDAQTGVVGPA AGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGRAVEHWNASEPAARVAKILGDGFA TAHLPLDERAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVN VHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLAPIVPASADSAAAPGASFVRSGPTAGAGVGQPA SGNTWLRQSRMTQGTLPVAQPLALYDALFGRKDTGAGTPHGATLALEAHDAPDGANAPGAPLYATMPGGDATPAFSPAGA AGLPMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLLIPVSMTATPVEVGTAEE ERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLD EMNALLRQMEATERADQCNHGRPTWYQLTLGDLDKLFMRGQ
Sequences:
>Translated_681_residues MSEFTDSAAGRSSTPPADAPSPASRPLRAIQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKR ISITDDGCGIPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATRIDAQTGVVGPA AGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGRAVEHWNASEPAARVAKILGDGFA TAHLPLDERAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVN VHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLAPIVPASADSAAAPGASFVRSGPTAGAGVGQPA SGNTWLRQSRMTQGTLPVAQPLALYDALFGRKDTGAGTPHGATLALEAHDAPDGANAPGAPLYATMPGGDATPAFSPAGA AGLPMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLLIPVSMTATPVEVGTAEE ERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLD EMNALLRQMEATERADQCNHGRPTWYQLTLGDLDKLFMRGQ >Mature_680_residues SEFTDSAAGRSSTPPADAPSPASRPLRAIQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRI SITDDGCGIPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATRIDAQTGVVGPAA GTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGRAVEHWNASEPAARVAKILGDGFAT AHLPLDERAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNV HPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLAPIVPASADSAAAPGASFVRSGPTAGAGVGQPAS GNTWLRQSRMTQGTLPVAQPLALYDALFGRKDTGAGTPHGATLALEAHDAPDGANAPGAPLYATMPGGDATPAFSPAGAA GLPMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLLIPVSMTATPVEVGTAEEE RETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDE MNALLRQMEATERADQCNHGRPTWYQLTLGDLDKLFMRGQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=34.2424242424242, Blast_Score=189, Evalue=9e-48, Organism=Homo sapiens, GI4505911, Length=351, Percent_Identity=27.9202279202279, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI189458898, Length=351, Percent_Identity=27.9202279202279, Blast_Score=143, Evalue=7e-34, Organism=Homo sapiens, GI4505913, Length=347, Percent_Identity=26.8011527377522, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI310128478, Length=347, Percent_Identity=26.8011527377522, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI189458896, Length=341, Percent_Identity=29.3255131964809, Blast_Score=136, Evalue=7e-32, Organism=Homo sapiens, GI263191589, Length=235, Percent_Identity=31.063829787234, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI310128480, Length=293, Percent_Identity=23.8907849829352, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI91992162, Length=267, Percent_Identity=24.7191011235955, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI91992160, Length=267, Percent_Identity=24.7191011235955, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1790612, Length=331, Percent_Identity=51.0574018126888, Blast_Score=312, Evalue=4e-86, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=34.375, Blast_Score=157, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17562796, Length=364, Percent_Identity=25, Blast_Score=135, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6323819, Length=313, Percent_Identity=33.8658146964856, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6324247, Length=345, Percent_Identity=26.3768115942029, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6325093, Length=717, Percent_Identity=20.0836820083682, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323063, Length=373, Percent_Identity=23.8605898123324, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI17136968, Length=313, Percent_Identity=34.185303514377, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI17136970, Length=368, Percent_Identity=25.8152173913043, Blast_Score=102, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 72306; Mature: 72175
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFTDSAAGRSSTPPADAPSPASRPLRAIQPLPDQLISQIAAGEVVERPASVVKELVEN CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDAGAGTLRILLDEGGVKRISITDDGCGIPADELPLALMRHATSKIRSLAELEAVATLG HHHCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FRGEALASIASVAEMFITSRTEDAAHATRIDAQTGVVGPAAGTRGTTIEVRELYFSTPAR CCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHCCHHH RKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGRAVEHWNASEPAARVAKILGDGFA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHCCCCE TAHLPLDERAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHG EEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC DRYPSYVLFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTA CCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC GGHAAHLAPIVPASADSAAAPGASFVRSGPTAGAGVGQPASGNTWLRQSRMTQGTLPVAQ CCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHH PLALYDALFGRKDTGAGTPHGATLALEAHDAPDGANAPGAPLYATMPGGDATPAFSPAGA HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC AGLPMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQ CCCCCCCCCCCCEEHHCEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCHHEEE TLLIPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARA EEEEEEECCCCCEECCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHH VLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNH HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC GRPTWYQLTLGDLDKLFMRGQ CCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure SEFTDSAAGRSSTPPADAPSPASRPLRAIQPLPDQLISQIAAGEVVERPASVVKELVEN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDAGAGTLRILLDEGGVKRISITDDGCGIPADELPLALMRHATSKIRSLAELEAVATLG HHHCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FRGEALASIASVAEMFITSRTEDAAHATRIDAQTGVVGPAAGTRGTTIEVRELYFSTPAR CCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHCCHHH RKFLKSEQTEFGHCLEMIRRAALARPDVAISVLHNGRAVEHWNASEPAARVAKILGDGFA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHCCCCE TAHLPLDERAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHG EEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC DRYPSYVLFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTA CCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC GGHAAHLAPIVPASADSAAAPGASFVRSGPTAGAGVGQPASGNTWLRQSRMTQGTLPVAQ CCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHH PLALYDALFGRKDTGAGTPHGATLALEAHDAPDGANAPGAPLYATMPGGDATPAFSPAGA HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC AGLPMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQ CCCCCCCCCCCCEEHHCEEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCHHEEE TLLIPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARA EEEEEEECCCCCEECCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHH VLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNH HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC GRPTWYQLTLGDLDKLFMRGQ CCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]