| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is pgm [H]
Identifier: 237813487
GI number: 237813487
Start: 3148810
End: 3150375
Strand: Reverse
Name: pgm [H]
Synonym: GBP346_A3263
Alternate gene names: 237813487
Gene position: 3150375-3148810 (Counterclockwise)
Preceding gene: 237813493
Following gene: 237813486
Centisome position: 76.87
GC content: 67.11
Gene sequence:
>1566_bases ATGGGCGCGATCGGCGTAGCTGAAACCAGCGATTATAAGTTGGATCGGATTCGCTTCCGGCATCGGCGGTGCGTTGCGTT GCCCCCCTCGCCGGTCGGTTCGGGCGAGGATTTTTTACGCATTCGCGTTGAGGCGGCCAAATTTTTTATGGACGACACAG AGAGTGAATCGATGATCTCCCAATCCATCTTCAAGGCATACGATATTCGGGGCGTGATCGGCAAGACGCTCGACGCCGAC GTCGCGCGCTCGATCGGCCGCGCATTCGGCAGCGAAGTGCGCGCGCAGGGCGGCGACGCGGTCGTCGTCGCGCGCGACGG CCGGCTCTCGGGGCCCGATCTCGTCGGCGCGCTCGCGGACGGGCTGCGCGCGGCGGGCGTCGATGTCGTCGACGTCGGCA TGGTGCCGACGCCCGTCGGCTACTTCGCGGCGAGCGTGCCGCTCGCGCTGTCGGGCGGCGAGCGCCGCGTCGATTCGTGC ATCGTCGTCACGGGCAGCCACAATCCGCCCGACTACAACGGTTTCAAGATGGTCCTGCGCGGCGCCGCGATTTACGGCGA CCAGATCCAGGGCCTGTACAAGCGCATCGTCGACGCGCGTTTCGAGACCGGCAACGGTTCGTATGAGCGATACGATGTCG CCGATCAATACGTCGAGCGCATCGTCGGCGACATCAGGCTCGCGCGGCCGCTGAAGCTCGTCGTCGATGCGGGCAACGGC GTCGCGGGCCCGCTCGCGACGCGCCTGTTCAAGGCGCTCGGCTGCGAACTCGTCGAGCTCTTCACCGACATCGACGGCAA CTTCCCGAACCACCACCCGGACCCGGCGCACCCGGAGAACCTGCAGGACGTGATCGCGAAGCTGAAGACGACCGATGCCG AGATCGGCTTCGCGTTCGACGGCGACGGCGACCGCCTCGGCGTCGTCACGAAGGACGGCCAGATCATCTATCCGGACCGC CAGCTGATGCTGTTCGCCGAGGAAGTGCTGTCGCGCAACCCGGGCGCGCAGATCATCTACGACGTGAAGTGCACGCGCAA TCTCGCGCAGTGGGTGCGCGAGAAGGGCGGCGAGCCGCTGATGTGGAAGACGGGCCACTCGCTCGTGAAGGCGAAGCTGC GCGAGACGGGCGCGCCGCTCGCGGGCGAGATGAGCGGCCACGTGTTCTTCAAGGATCGCTGGTACGGCTTCGACGACGGC CTCTACACGGGCGCGCGCCTGCTCGAGATCCTCGCGCGCGCGGCCGATCCGAGCGCGCTGCTCAACGGCTTGCCGAACGC GGTGTCGACGCCCGAGCTGCAACTGAAGCTCGACGAAGGCGAGAACGTGAAGCTGATCGACAAGCTGCGCGCCGACGCGA AGTTCGACGGCGCGGACGAGGTCGTGACGATCGACGGTCTGCGCGTCGAGTATCCGGACGGCTTCGGTCTCGCGCGTTCG TCGAACACGACGCCCGTGGTCGTGCTGCGCTTCGAGGCGAGCTCCGACGCGGCGCTCGCGCGGATCCAGGACGATTTCCG GCGCGCGCTGAAGGCGGCGAAGCCGGACGCGAACCTGCCGTTCTGA
Upstream 100 bases:
>100_bases TGGATTTCAGCATGGCGCGCGGCGCGGCAACGTGCGCGAGATGACCTGGCCGGCCGACCGCGGGAGCGGTTTTGCTGCGA TGAAGCATTCAGGCATTAAA
Downstream 100 bases:
>100_bases GCTTGACGGCGGCGCGGCGCGCGCCGGGCGCGGCGTGCCCGAGCTTGCGCTGACGCAAGCCTTGTCCAAAAAGCGGCGAC GCATGCGTGCGTTCGCCGCT
Product: phosphomannomutase/phosphoglucomutase (PMM /PGM)
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MGAIGVAETSDYKLDRIRFRHRRCVALPPSPVGSGEDFLRIRVEAAKFFMDDTESESMISQSIFKAYDIRGVIGKTLDAD VARSIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSC IVVTGSHNPPDYNGFKMVLRGAAIYGDQIQGLYKRIVDARFETGNGSYERYDVADQYVERIVGDIRLARPLKLVVDAGNG VAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKTTDAEIGFAFDGDGDRLGVVTKDGQIIYPDR QLMLFAEEVLSRNPGAQIIYDVKCTRNLAQWVREKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDG LYTGARLLEILARAADPSALLNGLPNAVSTPELQLKLDEGENVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARS SNTTPVVVLRFEASSDAALARIQDDFRRALKAAKPDANLPF
Sequences:
>Translated_521_residues MGAIGVAETSDYKLDRIRFRHRRCVALPPSPVGSGEDFLRIRVEAAKFFMDDTESESMISQSIFKAYDIRGVIGKTLDAD VARSIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSC IVVTGSHNPPDYNGFKMVLRGAAIYGDQIQGLYKRIVDARFETGNGSYERYDVADQYVERIVGDIRLARPLKLVVDAGNG VAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKTTDAEIGFAFDGDGDRLGVVTKDGQIIYPDR QLMLFAEEVLSRNPGAQIIYDVKCTRNLAQWVREKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDG LYTGARLLEILARAADPSALLNGLPNAVSTPELQLKLDEGENVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARS SNTTPVVVLRFEASSDAALARIQDDFRRALKAAKPDANLPF >Mature_520_residues GAIGVAETSDYKLDRIRFRHRRCVALPPSPVGSGEDFLRIRVEAAKFFMDDTESESMISQSIFKAYDIRGVIGKTLDADV ARSIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCI VVTGSHNPPDYNGFKMVLRGAAIYGDQIQGLYKRIVDARFETGNGSYERYDVADQYVERIVGDIRLARPLKLVVDAGNGV AGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKTTDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQ LMLFAEEVLSRNPGAQIIYDVKCTRNLAQWVREKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGL YTGARLLEILARAADPSALLNGLPNAVSTPELQLKLDEGENVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARSS NTTPVVVLRFEASSDAALARIQDDFRRALKAAKPDANLPF
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=457, Percent_Identity=37.199124726477, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1789566, Length=482, Percent_Identity=24.4813278008299, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 56484; Mature: 56353
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAIGVAETSDYKLDRIRFRHRRCVALPPSPVGSGEDFLRIRVEAAKFFMDDTESESMIS CCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHH QSIFKAYDIRGVIGKTLDADVARSIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALAD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH GLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNPPDYNGFKMVLR HHHHCCCCEEECCCCCCCHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHH GAAIYGDQIQGLYKRIVDARFETGNGSYERYDVADQYVERIVGDIRLARPLKLVVDAGNG HHHHCCHHHHHHHHHHHHCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCC VAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKTTDAEIGFAFD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC GDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLAQWVREKGGEPL CCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCE MWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARAADPSAL EECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHH LNGLPNAVSTPELQLKLDEGENVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARS HHCCCCCCCCCCEEEEECCCCCEEHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCC SNTTPVVVLRFEASSDAALARIQDDFRRALKAAKPDANLPF CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GAIGVAETSDYKLDRIRFRHRRCVALPPSPVGSGEDFLRIRVEAAKFFMDDTESESMIS CCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCHHHHHH QSIFKAYDIRGVIGKTLDADVARSIGRAFGSEVRAQGGDAVVVARDGRLSGPDLVGALAD HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH GLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNPPDYNGFKMVLR HHHHCCCCEEECCCCCCCHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHH GAAIYGDQIQGLYKRIVDARFETGNGSYERYDVADQYVERIVGDIRLARPLKLVVDAGNG HHHHCCHHHHHHHHHHHHCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCC VAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKTTDAEIGFAFD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC GDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLAQWVREKGGEPL CCCCEEEEEECCCEEECCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCE MWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARAADPSAL EECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHH LNGLPNAVSTPELQLKLDEGENVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARS HHCCCCCCCCCCEEEEECCCCCEEHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCC SNTTPVVVLRFEASSDAALARIQDDFRRALKAAKPDANLPF CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157643; 8188595 [H]