| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813485
Identifier: 237813485
GI number: 237813485
Start: 3146734
End: 3147618
Strand: Reverse
Name: 237813485
Synonym: GBP346_A3261
Alternate gene names: NA
Gene position: 3147618-3146734 (Counterclockwise)
Preceding gene: 237813486
Following gene: 237813484
Centisome position: 76.8
GC content: 68.93
Gene sequence:
>885_bases ATGAGCGAATCCCAGATCATCGAAATTGCGTCCGCCGACTGGAGCGGACAACAGCTGTCCGTGCCGCGCGAGCAACTGCT CGCGGGCCTCGAGGACGGCAAGGTGTTGTTCTTTTCGCATTTGCGCTTCGCGATCGAAGGCGGCGAGGAAGCGCTGCTCG ACCCGGCGCTCGCCGATCCGAAGCGCAAGAACATCAGCCTCGCGCCGAACGGCGGCGCGCTCGCCGGCGTGGCGGGCGAC GCGGTCACGCAGTCGGCCGTGCGCGCGCTGATCGCGCGCTTCCAGCAACAGGCGGGCGCGCTCGTCGACGGGCTCTTCCC CGAGTACCGCGGCAAGCTGCGCGTCGCGCCGACGAGCCTGCGCCTGATGCAGGTCGAGACGCGCGAGACGTCGTGGCGCA AGGACGACAGCCGGCTGCACGTCGACGCGTTCCCGTCGCGGCCGAACTACGGCGAGCGGATCCTGCGCGTGTTCACGAAC GTGAACCCGGCGGGCGTGCCGCGCGTATGGCGCGTCGGCGAGCCGTTCGAGGACGTCGCGAAGCGCTTCCTGCCGCACAT CAAGCCGCAGATGCCGGGCGTCGCGTGGCTGCTCGAGCTGCTGCACGTGACGAAGTCGCGCCGCAGCGCGTACGACCACC TGATGCTGAAGCTGCACGACAGCATGAAGGCCGATCTCGACTATCAGAAGAACAGCCCGCAGCAGACGATGCCGTTCCCG TCCGGCAGCGTGTGGGTGTGCTTCTCCGATCAGGCGTCGCACGCGGTGATGTCCGGGCAGTTCATGCTCGAGCAGACCTT CTTCCTGCCGGTCGGCGCGATGGCCCGCCCGCAGCGCGCGCCGCTCGGCATCCTCGAGCGCCTGCAGGGCAGGGCCCTCG TTTGA
Upstream 100 bases:
>100_bases CAACGTCGTCAATCTCGGCACCGCCGGCGCGCCGCCGTCCCTTTCGCAGGCGAAGGACGCACTCGCGTCGTTCGGCCTCT TGTAATCCCGACAGGCGATC
Downstream 100 bases:
>100_bases GCGCGCGCGACGCAGTCGCGGCCGGAGCCGCCGCGCGATGCTGAGGGCGATCTATCGCGGACTGTGGTGGCTCGTCGCGC CGCTCGCGGTGCTGCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFSHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVAGD AVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSLRLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPAGVPRVWRVGEPFEDVAKRFLPHIKPQMPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV
Sequences:
>Translated_294_residues MSESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFSHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVAGD AVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSLRLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPAGVPRVWRVGEPFEDVAKRFLPHIKPQMPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV >Mature_293_residues SESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFSHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVAGDA VTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSLRLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTNV NPAGVPRVWRVGEPFEDVAKRFLPHIKPQMPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFPS GSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32649; Mature: 32518
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFSHLRFAIEGGEEALLDPALADP CCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEHEEHEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVAGDAVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCE RLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPAGVPRVWRVGEPFEDVA EEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPHIKPQMPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV CCCEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure SESQIIEIASADWSGQQLSVPREQLLAGLEDGKVLFFSHLRFAIEGGEEALLDPALADP CCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEHEEHEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVAGDAVTQSAVRALIARFQQQAGALVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCCE RLMQVETRETSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPAGVPRVWRVGEPFEDVA EEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPHIKPQMPGVAWLLELLHVTKSRRSAYDHLMLKLHDSMKADLDYQKNSPQQTMPFP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SGSVWVCFSDQASHAVMSGQFMLEQTFFLPVGAMARPQRAPLGILERLQGRALV CCCEEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA